Clone RE47636 Report

Search the DGRC for RE47636

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:476
Well:36
Vector:pFlc-1
Associated Gene/TranscriptSIFaR-RA
Protein status:RE47636.pep: gold
Preliminary Size:1525
Sequenced Size:4808

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10823 2002-01-01 Sim4 clustering to Release 2
CG10823 2003-01-01 Sim4 clustering to Release 3
CG10823 2003-07-07 Blastp of sequenced clone
SIFR 2008-04-29 Release 5.5 accounting
SIFR 2008-08-15 Release 5.9 accounting
SIFR 2008-12-18 5.12 accounting

Clone Sequence Records

RE47636.complete Sequence

4808 bp (4808 high quality bases) assembled on 2003-07-07

GenBank Submission: BT009988

> RE47636.complete
AGTCCTCATTCAGACGCGAATCCGTTGACAACGCGGTCGCCCCAGGGGCG
GATGACTATATCCACGTCCCACGACCCACGATATCGCACCACGGAAACGA
CCACGCACCTTTTCTAAAACAAGCGAGATACCAGATTCAAGATTCGAGAT
ACGTCTACAGATAGTGATAGCGAAAGCGAGGCGCCAGTGAAAGTGCCATC
CGCCCAATCAAGACGCCGGATGATTTGATGATGGCAGCCAGCGGGCGGAT
TCGCAAGCGAAAGCATAAAAGCCATACAAGTGGCGACGTTCCCAGTACGA
CGACTAGTGTACCCATGCCCATTCCGACCATGGCGCCGGGGAAAATGGTC
GCGGAGACAATGGAGGAAGCCGCCGCCCTCGCCGGGGATTACAATAATTT
CACGCATAATTTCGTCGATTTGCAGAACCTCTTGAGTTTCAACGAATTGA
ATGGCACTAGTGGTAGCGGTGGGACTGCTGTCAGCTCCTTGGGCTCATCG
AGTGCCATTAAACTGAATAACAGCGCCATTACGGACACTCTGCTGGGCAC
GGTTCTCACTACGGCCACGGCCACGGTGGCTCCGGCGGCCAGTTCGCTGC
TAGCCACCTTGGCGGCCACCACAACAGCATCTGCGAGAGGATCCCTGGCG
GGCAAGTCGCTGGCCATCGCAGACGCCACTTCATCCACCTACTATTCCAA
CTTGCTGAACCTATCGCCGGCGACCACCAGCTTGATCTCGGCGGCTGCGG
CCACCAAGTCGTACAACGACAGTGCCCTCCGGTGGGAGCAGCTGGACGGG
AGCGTGGACTTCGGATTCGACCCACTCTACCGTCACTCGCTGGCCATGTC
CATGGTCTACTGCGTGGCCTACATCGTCGTCTTCCTGGTGGGACTCATCG
GGAATAGCTTCGTGATCGCCGTCGTCCTGCGGGCTCCTCGCATGCGGACG
GTGACGAACTACTTCATTGTGAATCTGGCCATTGCGGACATCCTGGTCAT
TGTCTTCTGCCTGCCAGCCACACTGATTGGCAACATCTTTGTGCCCTGGA
TGCTCGGATGGCTGATGTGCAAGTTTGTGCCCTACATACAAGGTGTCTCC
GTGGCAGCCTCGGTCTACAGCCTGATTGCCGTTTCCCTGGACAGGTTCAT
TGCCATCTGGTGGCCCCTGAAGCAGATGACAAAGCGACGTGCCCGCATCA
TGATAATCGGCATATGGGTAATCGCGCTGGTGACCACCATTCCTTGGCTG
CTCTTCTTCGACCTGGTGCCCGCCGAGGAGGTCTTCTCCGACGCCCTGGT
CTCGGCCTACTCGCAGCCGCAGTTCCTCTGCCAGGAGGTGTGGCCCCCGG
GCACGGATGGGAACCTCTACTTCCTGCTAGCCAACCTGGTGGCCTGCTAC
CTGCTGCCCATGTCCCTGATCACGCTCTGCTACGTGCTCATCTGGATCAA
GGTCTCCACGAGGTCCATCCCCGGCGAGTCCAAGGACGCGCAAATGGACC
GCATGCAGCAGAAGAGCAAGGTGAAGGTCATCAAGATGTTGGTGGCCGTG
GTCATCCTGTTTGTTTTGTCCTGGCTGCCGCTCTATGTCATCTTTGCGCG
GATCAAATTCGGCTCGGACATCTCGCAGGAGGAGTTCGAGATCCTCAAGA
AGGTGATGCCGGTGGCCCAGTGGCTGGGCTCCTCGAACAGCTGCATCAAC
CCCATACTCTACTCAGTGAACAAGAAGTACCGACGCGGATTCGCGGCCAT
CATCAAGTCGCGCAGCTGCTGCGGACGCCTCAGGTACTACGACAACGTGG
CCATCGCCTCCAGCACCACCAGCACCCGGAAGTCATCGCACTACCACCAG
AACAGCTCGAGGAAGAGTCCGAGCAGCAAGGGCAACGCGGTGTCCTACAT
CTACGAGCACAACTCGCTGCGGCGCCACAACATGATGCTCAAGCAGGACA
GCAACCTGTCGCAGCAGATGCTGCTTAAGCAGGACTCTCACGGATCGCGT
CAGTTCCTCATCAAGCAGGAGAGCTCCTGCAGTGATGCTTCTGGGATCCG
GCGACCCCTCTGCCAGCAGGACAGCAATGGCTCCAAGGTCTCCCTGTCCA
AGCAGGACTCAATTGTGTCCTACATGGAGGCACGCAGGTCGGCAGGACAC
GGTCTCAACGACACACTGGTGGACAGGGATAGCGTTTCCATGGATGTGGG
CCGGCGACAGGGCGCCACACCGAGCTCTCTGCTCGATAAGCGGCAGAAGT
TCGTAAAGCAGGACTCGGTGATCTCGTTTGTGGACCAGCGACCAGAGCAA
AGGCGCCATCAACTGGTGAAGCAGGACTCGGTCATCTCCTTCGCCGACCA
GCGACGCGGCCTGCTCCACAAACAGGACTCGCTGATGGCCAACCGGACGG
GTGATGCACCCACCCACCACGTTTCCATTCTGAAGAAGACCGACTCGCAG
CTCAGCTACGGCAGTTCGACTTCTCCTCGCAGGAATGCGGATCTCTACGA
ATAGGCAATATTGGGTTAAACGAGCTCCTAACTCTGGTAGATAGATACCA
ACCACCATTTGTGTGGGTCGATTTCAGTTGAACAAGTGGGATGAACTACC
TTAGGGGTTTATATGATCCAGCAATTTTAAAGCATAATTAAGATGGTTTA
CCTTCGAAGGTGGATTATTTACCTTCGCTCTAATACGTTCTTGAATCACA
TAAACCCTTACGATGTATTGCTCAACAAATCGACCCATCCTAAAATACAA
AGTAAAGCAACGATACCAAAAACTTACCGAACCACAAAGGAAGTCTTAGA
AGATTCCTATAGCAGATAGTTAGACATGGATCGATTGAAGTCGAGTGATA
GGCCTACGATTGTGATACAAGTCGGCAGTTCTGGTGGGTTAAGAATCAGT
CACTAGGCTGTGCCGCACACATCCGTCATCGTCGTTGGGATAGTGTAGTG
GACGGGATGGAGTGCCAGTGGGGACGGATATCGGGATGGACCAATTGTGG
GTGGGTATATCTAATCAAAGATCGCTTAGCTAGGAACAGACACGCCACAC
GGGGCACGGGAAACAGGACTTCCCCGCACACACACACACCACAGAAAACA
GAAGACAGAGTACACAGAAGACACTCCCCACAGACCTAATAGGTAATAGA
TGTTTTATACGTGTTTCAGAGGTACTACACAAAATATGAACTACTCCTTG
GCTATGGCTATATAATACCTATATGTACCGTTACGCAGTTTTAAGATTGT
TTGTACTCGCAATTTGCTATATCGAAAAGTTTGGTTAAGAGTGGGCGGAA
CAACGTGGGAATCGAAGGGGTTATAATAGCTTAGCTAAACTTTTTGTACG
ACGGCGAACGTGAGTGAAACGGGCAAGTCCAGTATCATAGTTGAGAAACG
AAAACAAAACAAAATGAGATAACACCGAGGTCTAAAGTAACGTACCTACT
AAATTTTTGTATGGAAATTCTTACAATTTATACATATATATTTATATTGA
TTTTGGAATAAGCAATATGCAATACAAGCGTATGTCTGCGCGTACGCCGT
GTATCTATCAAACAACAATAATCAATTTTATTAGAATTTTACACAACTGA
GTCGCGGCAGCGGAAATGGGTTAGAAAACGCAATGCACCGGAAGGCGAGT
GAAAGCGAAAACAATTGACACACCATCCAAGCTTTGTTATCGCTCAATCG
CCGACTATTTCGATACTTCGATACTTCGATATAGGTGGGCAGAGGCACCA
GAGACAGCAGAGATAGTGAGGGCATCGAACGCGCACAAAGTAACACTTGA
CCATGCTGGGACAGAGTAGATTAGGGGGGAATGGAATAGTCTAGGGATTA
GGGCTAGATTGGGATTAGAACAGGACGAAGGAGTAGGTTGTCCGCTAAGT
GAGCACAAAGCAGTCAAAGATTTCGCACTAAACGTATCACTACAAACTAA
CAAAGAAGCAAACAATAATCGAACTCAAATTCGTTAAACACTAAACACCA
ATAAACTTTAAACTATACGAAATAAAATTTTAACGGATAGCGCAAGGAGG
CAGAATCAATGGTAAAACTATGAAACTAAACGTAACGATTAACTATGCAA
TTTTATTGTTAGCCAAAATTTTATAACTGTCAAGTAACGAACAAGTAAAT
ATTTATATGTATACAGAATATATCAAGTATAAAGCATACGTTATATATCT
TTATATACTTCGATTGCATTAGGCGCTGATCGGTAGAGTTTTAATTGGCT
TTTGTGTAACCGAGAACGATCTGATCAGAGATTTAGTCTAGTCGTACTCA
TTGCTCTCTGTTCAGGCACTTGGGGGGGAGCTACATATGTGTAAACCCGA
TCCGAAATCGAAAAGTAGAAGACATGCACAGCCCGTTCAAAACTCCAGCG
CTTAGTGTAAGGCAAGCATCTACAATGAGGAATATCAATAATATATTTCA
AATATACAAATATATATTTATATAGGCCTAGCGACTCACAAGCTGGCAAT
ATGTGGCAAGCAGCCACAGAAGCGAACAACAACGTCTAGTAAACAAGAGA
TTACATTTATACAAATACATACATATTATATGCTGCAAGTACGAAGGGCG
CGCAATAGAATGTCCTTTCCCGCTTTCGATTCCACTTAAAGAAGAACCCG
AAAGTTGCGAGCAGGCTGATTTAAGCAAAGTAATATTTATCGAATACCCC
AATTTGAACTTTAGGTTTTAAAGTTTTAAAACGTAGAGCATACCCATACT
CACATGCATGTGCATTATGTTCGTTATTTACCGATGCGGAATAAAAAAAA
AAAAAAAA

RE47636.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:39:44
Subject Length Description Subject Range Query Range Score Percent Strand
SIFR-RA 4792 SIFR-RA 1..4792 1..4792 23930 99.9 Plus
SIFR-RC 5086 SIFR-RC 226..4927 107..4808 23465 99.9 Plus
SIFR-RB 4916 SIFR-RB 1906..4916 1782..4792 15025 99.9 Plus
SIFR-RB 4916 SIFR-RB 1..1785 1..1785 8925 100 Plus
SIFR-RC 5086 SIFR-RC 54..159 1..106 530 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 12:27:20
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 17100663..17103673 4792..1782 14905 99.7 Minus
chr3R 27901430 chr3R 17115130..17116001 978..107 4360 100 Minus
chr3R 27901430 chr3R 17103800..17104443 1785..1142 3220 100 Minus
chr3R 27901430 chr3R 17117698..17117803 106..1 530 100 Minus
chr3R 27901430 chr3R 17107888..17107989 1146..1045 510 100 Minus
chr3R 27901430 chr3R 17114984..17115051 1044..977 340 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:59:05 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 12:27:17
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 21276819..21279845 4808..1782 15090 99.9 Minus
3R 32079331 3R 21291318..21292189 978..107 4360 100 Minus
3R 32079331 3R 21279966..21280609 1785..1142 3220 100 Minus
3R 32079331 3R 21293893..21293998 106..1 530 100 Minus
3R 32079331 3R 21284076..21284177 1146..1045 510 100 Minus
3R 32079331 3R 21291172..21291239 1044..977 340 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:00:58
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 21017650..21020676 4808..1782 15090 99.9 Minus
3R 31820162 3R 21032149..21033020 978..107 4360 100 Minus
3R 31820162 3R 21020797..21021440 1785..1142 3220 100 Minus
3R 31820162 3R 21034724..21034829 106..1 530 100 Minus
3R 31820162 3R 21024907..21025008 1146..1045 510 100 Minus
3R 31820162 3R 21032003..21032070 1044..977 340 100 Minus
Blast to na_te.dros performed 2019-03-16 12:27:18
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy7 5486 gypsy7 GYPSY7 5486bp 1973..2067 4739..4649 122 64.6 Minus

RE47636.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 12:28:14 Download gff for RE47636.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 17107890..17107989 1045..1144 100 <- Minus
chr3R 17114984..17115050 978..1044 100 <- Minus
chr3R 17100663..17103671 1784..4792 99 <- Minus
chr3R 17103802..17104440 1145..1783 100 <- Minus
chr3R 17115131..17116001 107..977 100 <- Minus
chr3R 17117698..17117803 1..106 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:51:39 Download gff for RE47636.complete
Subject Subject Range Query Range Percent Splice Strand
SIFR-RA 1..2277 228..2504 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:31:44 Download gff for RE47636.complete
Subject Subject Range Query Range Percent Splice Strand
SIFR-RC 1..2277 228..2504 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 13:22:52 Download gff for RE47636.complete
Subject Subject Range Query Range Percent Splice Strand
SIFR-RA 1..2277 228..2504 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:05:27 Download gff for RE47636.complete
Subject Subject Range Query Range Percent Splice Strand
SIFR-RA 1..2277 228..2504 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:45:57 Download gff for RE47636.complete
Subject Subject Range Query Range Percent Splice Strand
SIFaR-RA 1..2277 228..2504 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:51:39 Download gff for RE47636.complete
Subject Subject Range Query Range Percent Splice Strand
SIFR-RA 1..4792 1..4792 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:31:44 Download gff for RE47636.complete
Subject Subject Range Query Range Percent Splice Strand
SIFR-RA 1..4792 1..4792 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:22:52 Download gff for RE47636.complete
Subject Subject Range Query Range Percent Splice Strand
SIFR-RA 1..4792 1..4792 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:05:28 Download gff for RE47636.complete
Subject Subject Range Query Range Percent Splice Strand
SIFR-RA 1..4792 1..4792 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:45:57 Download gff for RE47636.complete
Subject Subject Range Query Range Percent Splice Strand
SIFaR-RA 1..4792 1..4792 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:28:14 Download gff for RE47636.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21276835..21279843 1784..4792 99 <- Minus
3R 21279968..21280606 1145..1783 100 <- Minus
3R 21284078..21284177 1045..1144 100 <- Minus
3R 21291172..21291238 978..1044 100 <- Minus
3R 21291319..21292189 107..977 100 <- Minus
3R 21293893..21293998 1..106 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:28:14 Download gff for RE47636.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21276835..21279843 1784..4792 99 <- Minus
3R 21279968..21280606 1145..1783 100 <- Minus
3R 21284078..21284177 1045..1144 100 <- Minus
3R 21291172..21291238 978..1044 100 <- Minus
3R 21291319..21292189 107..977 100 <- Minus
3R 21293893..21293998 1..106 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:28:14 Download gff for RE47636.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21276835..21279843 1784..4792 99 <- Minus
3R 21279968..21280606 1145..1783 100 <- Minus
3R 21284078..21284177 1045..1144 100 <- Minus
3R 21291172..21291238 978..1044 100 <- Minus
3R 21291319..21292189 107..977 100 <- Minus
3R 21293893..21293998 1..106 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:22:52 Download gff for RE47636.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 17102557..17105565 1784..4792 99 <- Minus
arm_3R 17105690..17106328 1145..1783 100 <- Minus
arm_3R 17109800..17109899 1045..1144 100 <- Minus
arm_3R 17116894..17116960 978..1044 100 <- Minus
arm_3R 17117041..17117911 107..977 100 <- Minus
arm_3R 17119615..17119720 1..106 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:43:36 Download gff for RE47636.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21024909..21025008 1045..1144 100 <- Minus
3R 21032003..21032069 978..1044 100 <- Minus
3R 21017666..21020674 1784..4792 99 <- Minus
3R 21020799..21021437 1145..1783 100 <- Minus
3R 21032150..21033020 107..977 100 <- Minus
3R 21034724..21034829 1..106 100   Minus

RE47636.pep Sequence

Translation from 227 to 2503

> RE47636.pep
MMAASGRIRKRKHKSHTSGDVPSTTTSVPMPIPTMAPGKMVAETMEEAAA
LAGDYNNFTHNFVDLQNLLSFNELNGTSGSGGTAVSSLGSSSAIKLNNSA
ITDTLLGTVLTTATATVAPAASSLLATLAATTTASARGSLAGKSLAIADA
TSSTYYSNLLNLSPATTSLISAAAATKSYNDSALRWEQLDGSVDFGFDPL
YRHSLAMSMVYCVAYIVVFLVGLIGNSFVIAVVLRAPRMRTVTNYFIVNL
AIADILVIVFCLPATLIGNIFVPWMLGWLMCKFVPYIQGVSVAASVYSLI
AVSLDRFIAIWWPLKQMTKRRARIMIIGIWVIALVTTIPWLLFFDLVPAE
EVFSDALVSAYSQPQFLCQEVWPPGTDGNLYFLLANLVACYLLPMSLITL
CYVLIWIKVSTRSIPGESKDAQMDRMQQKSKVKVIKMLVAVVILFVLSWL
PLYVIFARIKFGSDISQEEFEILKKVMPVAQWLGSSNSCINPILYSVNKK
YRRGFAAIIKSRSCCGRLRYYDNVAIASSTTSTRKSSHYHQNSSRKSPSS
KGNAVSYIYEHNSLRRHNMMLKQDSNLSQQMLLKQDSHGSRQFLIKQESS
CSDASGIRRPLCQQDSNGSKVSLSKQDSIVSYMEARRSAGHGLNDTLVDR
DSVSMDVGRRQGATPSSLLDKRQKFVKQDSVISFVDQRPEQRRHQLVKQD
SVISFADQRRGLLHKQDSLMANRTGDAPTHHVSILKKTDSQLSYGSSTSP
RRNADLYE*

RE47636.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 15:06:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17259-PA 781 GF17259-PA 1..781 1..758 3354 86.4 Plus
Dana\GF10462-PA 542 GF10462-PA 24..329 197..505 436 33.5 Plus
Dana\GF17441-PA 508 GF17441-PA 85..413 210..547 406 31.6 Plus
Dana\GF23267-PA 345 GF23267-PA 100..317 208..431 384 39.7 Plus
Dana\GF25215-PA 597 GF25215-PA 51..405 203..509 383 28.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 15:06:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14716-PA 766 GG14716-PA 1..761 1..758 3946 97.4 Plus
Dere\GG14129-PA 542 GG14129-PA 9..327 185..505 433 33.8 Plus
Dere\GG17272-PA 506 GG17272-PA 85..413 210..547 405 31.6 Plus
Dere\GG12147-PA 426 GG12147-PA 106..324 208..429 392 39.6 Plus
Dere\GG13349-PA 603 GG13349-PA 61..411 203..509 390 29.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 15:06:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18883-PA 771 GH18883-PA 1..771 1..758 3078 80.4 Plus
Dgri\GH18630-PA 340 GH18630-PA 95..325 198..434 415 38.5 Plus
Dgri\GH17357-PA 531 GH17357-PA 85..413 210..547 410 31.6 Plus
Dgri\GH16251-PA 543 GH16251-PA 8..330 181..505 397 31.5 Plus
Dgri\GH16355-PA 605 GH16355-PA 82..412 203..509 390 29.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:55:46
Subject Length Description Subject Range Query Range Score Percent Strand
SIFaR-PC 758 CG10823-PC 1..758 1..758 3837 100 Plus
SIFaR-PA 758 CG10823-PA 1..758 1..758 3837 100 Plus
RYa-R-PC 467 CG5811-PC 101..431 204..542 509 35 Plus
RYa-R-PB 518 CG5811-PB 101..431 204..542 509 35 Plus
RYa-R-PA 464 CG5811-PA 101..411 204..517 500 36.1 Plus
Lkr-PA 542 CG10626-PA 24..382 197..552 430 32.6 Plus
TkR86C-PA 504 CG6515-PA 85..413 210..547 409 31.3 Plus
TkR86C-PB 555 CG6515-PB 85..406 210..540 401 31.4 Plus
sNPF-R-PB 600 CG7395-PB 10..408 147..509 383 28.5 Plus
sNPF-R-PA 600 CG7395-PA 10..408 147..509 383 28.5 Plus
TkR99D-PB 517 CG7887-PB 27..397 121..510 370 29 Plus
TkR99D-PA 519 CG7887-PA 27..397 121..510 370 29 Plus
TkR99D-PC 564 CG7887-PC 27..397 121..510 370 29 Plus
AstA-R1-PD 394 CG2872-PD 73..362 207..509 365 29.6 Plus
AstA-R1-PB 394 CG2872-PB 73..362 207..509 365 29.6 Plus
AstA-R2-PC 357 CG10001-PC 47..353 217..537 350 28.3 Plus
AstA-R2-PA 357 CG10001-PA 47..353 217..537 350 28.3 Plus
CCHa2-R-PB 477 CG14593-PB 71..368 210..515 341 28.1 Plus
CCHa2-R-PA 489 CG14593-PA 71..368 210..515 341 28.1 Plus
AstA-R2-PB 350 CG10001-PB 47..324 217..505 340 29 Plus
NPFR-PA 485 CG1147-PA 93..424 215..552 327 25.9 Plus
NPFR-PD 489 CG1147-PD 93..424 215..552 327 25.9 Plus
NPFR-PC 462 CG1147-PC 93..395 215..516 322 26.7 Plus
NPFR-PB 466 CG1147-PB 93..395 215..516 322 26.7 Plus
ETHR-PC 471 CG5911-PC 13..370 208..566 319 28.6 Plus
ETHR-PA 471 CG5911-PA 13..370 208..566 319 28.6 Plus
CCHa1-R-PA 499 CG30106-PA 86..417 213..542 319 28.8 Plus
AstC-R2-PE 549 CG13702-PE 21..437 74..517 306 25.4 Plus
AstC-R2-PB 549 CG13702-PB 21..437 74..517 306 25.4 Plus
AstC-R2-PD 567 CG13702-PD 21..437 74..517 306 25.4 Plus
AstC-R2-PF 593 CG13702-P2-RF 21..437 74..517 306 25.4 Plus
CapaR-PB 477 CG14575-PB 64..428 199..585 305 24.7 Plus
ETHR-PB 461 CG5911-PB 13..361 208..553 294 26.2 Plus
PK2-R1-PA 660 CG8784-PA 24..449 115..564 294 25.1 Plus
CCAP-R-PC 494 CG33344-PC 4..405 94..495 289 26.1 Plus
AkhR-PD 443 CG11325-PD 23..321 190..497 278 24.9 Plus
AkhR-PB 443 CG11325-PB 23..321 190..497 278 24.9 Plus
AkhR-PA 443 CG11325-PA 23..321 190..497 278 24.9 Plus
AkhR-PC 455 CG11325-PC 23..321 190..497 278 24.9 Plus
CCKLR-17D1-PA 673 CG42301-PA 182..365 215..405 278 34.8 Plus
CCKLR-17D3-PB 584 CG32540-PB 107..299 204..405 270 31.6 Plus
AstC-R1-PA 483 CG7285-PA 58..364 195..505 269 26 Plus
Octbeta2R-PF 630 CG33976-PF 34..545 76..578 263 20.3 Plus
Octbeta2R-PG 536 CG33976-PG 34..536 76..569 258 20.5 Plus
Octbeta2R-PE 536 CG33976-PE 34..536 76..569 258 20.5 Plus
Octbeta2R-PD 536 CG33976-PD 34..536 76..569 258 20.5 Plus
Octbeta2R-PC 536 CG33976-PC 34..536 76..569 258 20.5 Plus
Octbeta2R-PA 536 CG33976-PA 34..536 76..569 258 20.5 Plus
PK2-R2-PB 599 CG8795-PB 63..506 205..625 258 23.6 Plus
PK2-R2-PA 599 CG8795-PA 63..506 205..625 258 23.6 Plus
Octbeta3R-PJ 445 CG42244-PJ 4..423 63..505 250 25.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 15:06:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10832-PA 787 GI10832-PA 3..787 8..758 3061 80.3 Plus
Dmoj\GI24301-PA 463 GI24301-PA 91..455 198..575 540 36.2 Plus
Dmoj\GI23895-PA 530 GI23895-PA 85..485 210..603 387 28.9 Plus
Dmoj\GI11548-PA 618 GI11548-PA 87..420 203..509 387 29.6 Plus
Dmoj\GI13186-PA 555 GI13186-PA 8..330 181..505 386 31.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 15:06:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27160-PA 821 GL27160-PA 1..797 2..739 3163 82.6 Plus
Dper\GL12071-PA 565 GL12071-PA 24..329 197..505 415 33.3 Plus
Dper\GL12625-PA 505 GL12625-PA 55..413 187..547 405 30.2 Plus
Dper\GL23895-PA 405 GL23895-PA 118..340 208..433 397 39.2 Plus
Dper\GL13493-PA 531 GL13493-PA 53..499 157..598 378 27.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 15:06:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10579-PB 775 GA10579-PB 1..751 2..739 3139 86.3 Plus
Dpse\GA10579-PC 599 GA10579-PC 1..530 2..520 2137 84.7 Plus
Dpse\GA30114-PA 480 GA30114-PA 118..472 208..575 532 36.1 Plus
Dpse\GA23817-PB 512 GA23817-PB 24..329 197..505 423 33.3 Plus
Dpse\GA19655-PA 505 GA19655-PA 55..413 187..547 405 30.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 15:06:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15085-PA 762 GM15085-PA 1..762 1..758 4009 98.8 Plus
Dsec\GM13917-PA 540 GM13917-PA 9..327 185..505 431 33.8 Plus
Dsec\GM26156-PA 528 GM26156-PA 85..417 210..551 394 29.7 Plus
Dsec\GM10359-PA 383 GM10359-PA 112..324 215..429 390 38.7 Plus
Dsec\GM18788-PA 600 GM18788-PA 34..408 163..509 386 29.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 15:06:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19990-PA 806 GD19990-PA 272..806 224..758 2851 98.5 Plus
Dsim\GD21321-PA 445 GD21321-PA 112..385 215..515 435 34.3 Plus
Dsim\GD13194-PA 542 GD13194-PA 11..329 185..505 433 33.8 Plus
Dsim\GD20709-PA 504 GD20709-PA 85..413 210..547 403 31.6 Plus
Dsim\GD12228-PA 600 GD12228-PA 34..408 163..509 379 29.1 Plus
Dsim\GD19990-PA 806 GD19990-PA 1..41 1..41 212 97.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 15:06:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14438-PA 817 GJ14438-PA 1..817 2..758 3048 77.2 Plus
Dvir\GJ23080-PA 371 GJ23080-PA 54..323 157..434 421 37.1 Plus
Dvir\GJ23988-PA 526 GJ23988-PA 85..413 210..547 407 31.1 Plus
Dvir\GJ11962-PA 543 GJ11962-PA 25..330 197..505 401 32.6 Plus
Dvir\GJ11567-PA 600 GJ11567-PA 81..415 203..509 385 30.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 15:06:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12768-PA 781 GK12768-PA 1..781 2..758 3066 81.5 Plus
Dwil\GK17310-PA 577 GK17310-PA 21..326 197..505 427 33.6 Plus
Dwil\GK11283-PA 511 GK11283-PA 85..426 210..560 410 30.8 Plus
Dwil\GK11038-PA 387 GK11038-PA 123..366 198..447 399 36.6 Plus
Dwil\GK17048-PA 643 GK17048-PA 75..425 203..509 371 28.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 15:06:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24999-PA 769 GE24999-PA 1..764 1..758 3946 97 Plus
Dyak\GE20556-PA 558 GE20556-PA 9..327 185..505 432 33.8 Plus
Dyak\GE24673-PA 505 GE24673-PA 85..413 210..547 403 31.6 Plus
Dyak\GE23708-PA 333 GE23708-PA 76..328 177..433 400 37.1 Plus
Dyak\GE22441-PA 601 GE22441-PA 59..409 203..509 385 29.6 Plus

RE47636.hyp Sequence

Translation from 227 to 2503

> RE47636.hyp
MMAASGRIRKRKHKSHTSGDVPSTTTSVPMPIPTMAPGKMVAETMEEAAA
LAGDYNNFTHNFVDLQNLLSFNELNGTSGSGGTAVSSLGSSSAIKLNNSA
ITDTLLGTVLTTATATVAPAASSLLATLAATTTASARGSLAGKSLAIADA
TSSTYYSNLLNLSPATTSLISAAAATKSYNDSALRWEQLDGSVDFGFDPL
YRHSLAMSMVYCVAYIVVFLVGLIGNSFVIAVVLRAPRMRTVTNYFIVNL
AIADILVIVFCLPATLIGNIFVPWMLGWLMCKFVPYIQGVSVAASVYSLI
AVSLDRFIAIWWPLKQMTKRRARIMIIGIWVIALVTTIPWLLFFDLVPAE
EVFSDALVSAYSQPQFLCQEVWPPGTDGNLYFLLANLVACYLLPMSLITL
CYVLIWIKVSTRSIPGESKDAQMDRMQQKSKVKVIKMLVAVVILFVLSWL
PLYVIFARIKFGSDISQEEFEILKKVMPVAQWLGSSNSCINPILYSVNKK
YRRGFAAIIKSRSCCGRLRYYDNVAIASSTTSTRKSSHYHQNSSRKSPSS
KGNAVSYIYEHNSLRRHNMMLKQDSNLSQQMLLKQDSHGSRQFLIKQESS
CSDASGIRRPLCQQDSNGSKVSLSKQDSIVSYMEARRSAGHGLNDTLVDR
DSVSMDVGRRQGATPSSLLDKRQKFVKQDSVISFVDQRPEQRRHQLVKQD
SVISFADQRRGLLHKQDSLMANRTGDAPTHHVSILKKTDSQLSYGSSTSP
RRNADLYE*

RE47636.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:06:22
Subject Length Description Subject Range Query Range Score Percent Strand
SIFaR-PC 758 CG10823-PC 1..758 1..758 3837 100 Plus
SIFaR-PA 758 CG10823-PA 1..758 1..758 3837 100 Plus
RYa-R-PC 467 CG5811-PC 101..431 204..542 509 35 Plus
RYa-R-PB 518 CG5811-PB 101..431 204..542 509 35 Plus
RYa-R-PA 464 CG5811-PA 101..411 204..517 500 36.1 Plus