Clone RE48016 Report

Search the DGRC for RE48016

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:480
Well:16
Vector:pFlc-1
Associated Gene/TranscriptRgk1-RA
Protein status:RE48016.pep: gold
Preliminary Size:2296
Sequenced Size:1958

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9811 2002-01-01 Sim4 clustering to Release 2
CG9811 2003-01-01 Sim4 clustering to Release 3
CG9811 2003-08-11 Blastp of sequenced clone
Rgk1 2008-04-29 Release 5.5 accounting
Rgk1 2008-08-15 Release 5.9 accounting
Rgk1 2008-12-18 5.12 accounting

Clone Sequence Records

RE48016.complete Sequence

1958 bp (1958 high quality bases) assembled on 2003-08-11

GenBank Submission: BT010242

> RE48016.complete
GGTTATAGAGAGCCATCCGGAAGCAAAGCATCGCCATTAAAGCAGCGGAA
ACGCGAGAAATCAGATCAAAGTATTATTATCTACAGATCGTGTTATTAAG
TGCCAACCTGTTTGTGTTAGCTATGTAAACGCGGTGCCTTACGGACATAT
AACGCTATAAAAAGGATAATAAATCCCTTAAACAATTTACAACAAAGTTT
CCTATTCCAAAGTATATAAATTCGGTGAATTAGTGTAAAATGGCGCCCTT
CTACAAGCGCATCTGCCGCAGTCTTTCCAAGCGCTACAAGGAGCCCTCGT
TAAGTCTGGACAATACAGTCGAGACGCTGCTAATCAAGAATGAGGGGGAC
TTCATCAGCGTGGAGCAGGGCAAGGAGCTGGTGGCTCGCAAGCGCAACTC
CCAGCAGCTGGCACATCCGCCGGCCCACTTGCATCACCACACCCAGAACC
ACGCCCACAATCATCACACTCTCCAGCAGCAGCAGCATCAGCAGCAGCAG
CAACAACAACACAAGCGGGACGAGAATATGAGGCAGCTCCTGGATGTGAC
CAACACGCTCACCATTGAGGAGCTGCGCGATTTTCAGATGCGATATGGCT
CACCACATCACAGCCGCTCGCAATCGGTGAAGATGCCCGGCAGCAGAGCA
TCCGGAAGGCCAAATCAGCTGTGTCTGCCCCAGCAGAGATCCAGGGTGGC
TTCCATGCCGAATACAGGAGTAGAGGAGGAGTACTACAGACTGCGTCACT
TCTCGATCACCGGCAAGGGTGTGGTAAATCGCGGTGATTCCCTCAAGAGC
CGACGCAGTCGCTCCAACAACAGCGTGGCCAGTTCCAATTCCAGCACGGA
GCACCTGACCACCCAGCAGCAGCTTTCCGCCCCCGCATCCGTATCCGCTC
GAACTTCGCTGGCTTCCAGCAGGGAGAGCAGTACATCCAATCCGGGCAAC
GGTCCCTACAGGGTCCTGATGCTGGGAGGTCCTGCGGTGGGCAAGAGTTC
GCTCGTCTCGCAGTTCATGACGTCGGAGTACCTGCACGCCTACGACACGA
GCATCGATGATGAGTCCGGCGAGAAGGCCGTTTCAGTATTACTCAGTGGC
GAAGAGTCCGAGCTGATTTTCATCGACCATGGATACACCGAAATGACTCC
GGATGAGTGCCTGACCAACTACGATCCGCACGGTTACTGCGTCATCTATT
CGGCCGCGGACAGGAGCAGCTTCAGTGTGGCGGAGCAGGTGCTGCAGGTG
CTCTGGACCAATCAGAACATCGCCCAGAAGGCAGTCATTCTAGTATCGAA
CAAGGCCGACCTGGCCAGGAGTCGACTGGTCACCTCTGAAGAGGGCAAGG
CCATGGCCACCGCCTACGATTGTAAATTCATCGAGACGTCGGTGGGCATT
AATCACAATGTGGACGAGCTGCTGGTGGGTCTGTTATCACAGATACGACT
CAAGCTGGAGAATCCCGAAAAGTCCAGGGATCTGTTCCGAAAGCGTTCGA
TTCGAAAGTCAAAGAGACGCGCCTGCTCGCCACTGAATGCCGGATGCCTG
AATGCCAATACCCCTCTGGGTCCGCTGGGGGAGGCGGTGGCCACGCCCCC
GGGCAGTGCCCAAAGCAGTCCCCGCAAATACCGTGGATCAAGGACCTCCA
CCAGCCTGAAAGTCAAGGGACTTTTGGGCCGCGTGTGGACTCGGGACTCC
AAGTCGAAGAGCTGCGAGAATCTGCATGTACTCTAAGCACAGAGATTATC
CAAAGTGTAACCCACAAGTTTCCTATAGAGTATGCAAGATCCTAAGTTAA
AGAAGAAACAGACTCGACTACTACCGGGGGTATTATTCCCAACTGTACAT
ATTGTGTATAATTTTAGTCTTAATTTACGCTAGTCACTTCCTCCATTAAT
CATTGTATATAGTTTGTCTAAATATAAAACTATTATTTGTACAAAAAAAA
AAAAAAAA

RE48016.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:43:56
Subject Length Description Subject Range Query Range Score Percent Strand
Rgk1.a 3184 Rgk1.a 1..1940 2..1941 9685 99.9 Plus
Rgk1-RB 2182 Rgk1-RB 5..1944 2..1941 9685 99.9 Plus
Rgk2.b 4901 Rgk2.b 2294..2414 956..1076 215 78.5 Plus
Rgk2.b 4901 Rgk2.b 2900..2939 1697..1736 170 95 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:22:16
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 15199576..15199902 1941..1615 1620 99.7 Minus
chr2R 21145070 chr2R 15206557..15206862 597..292 1500 99.3 Minus
chr2R 21145070 chr2R 15212372..15212663 293..2 1445 99.7 Minus
chr2R 21145070 chr2R 15205246..15205515 962..693 1350 100 Minus
chr2R 21145070 chr2R 15201745..15201937 1341..1149 965 100 Minus
chr2R 21145070 chr2R 15199969..15200112 1618..1475 720 100 Minus
chr2R 21145070 chr2R 15200178..15200316 1478..1340 695 100 Minus
chr2R 21145070 chr2R 15205572..15205675 695..592 520 100 Minus
chr2R 21145070 chr2R 15204712..15204813 1060..959 495 99 Minus
chr2R 21145070 chr2R 15202421..15202513 1148..1056 465 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:59:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:22:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19312392..19312718 1941..1615 1635 100 Minus
2R 25286936 2R 19319383..19319688 597..292 1515 99.7 Minus
2R 25286936 2R 19325198..19325489 293..2 1445 99.7 Minus
2R 25286936 2R 19318072..19318341 962..693 1350 100 Minus
2R 25286936 2R 19314561..19314753 1341..1149 965 100 Minus
2R 25286936 2R 19312785..19312928 1618..1475 720 100 Minus
2R 25286936 2R 19312994..19313132 1478..1340 695 100 Minus
2R 25286936 2R 19318398..19318501 695..592 520 100 Minus
2R 25286936 2R 19317538..19317639 1060..959 495 99 Minus
2R 25286936 2R 19315247..19315339 1148..1056 465 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:10:44
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 19313591..19313917 1941..1615 1635 100 Minus
2R 25260384 2R 19320582..19320887 597..292 1515 99.6 Minus
2R 25260384 2R 19326397..19326688 293..2 1445 99.6 Minus
2R 25260384 2R 19319271..19319540 962..693 1350 100 Minus
2R 25260384 2R 19315760..19315952 1341..1149 965 100 Minus
2R 25260384 2R 19313984..19314127 1618..1475 720 100 Minus
2R 25260384 2R 19314193..19314331 1478..1340 695 100 Minus
2R 25260384 2R 19319597..19319700 695..592 520 100 Minus
2R 25260384 2R 19318737..19318838 1060..959 495 99 Minus
2R 25260384 2R 19316446..19316538 1148..1056 465 100 Minus
2R 25260384 2R 18548168..18548207 1697..1736 170 95 Plus
2R 25260384 2R 18546823..18546913 956..1046 170 79.1 Plus
Blast to na_te.dros performed 2019-03-15 14:22:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\HeT-A 5691 Dyak\HeT-A YAKHETA 5691bp 230..377 148..297 124 59.4 Plus
McClintock 6450 McClintock McCLINTOCK 6450bp 1020..1120 1933..1833 117 63.8 Minus

RE48016.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:23:18 Download gff for RE48016.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 15199575..15199898 1619..1942 99 <- Minus
chr2R 15199969..15200109 1478..1618 100 <- Minus
chr2R 15200179..15200314 1342..1477 100 <- Minus
chr2R 15201745..15201937 1149..1341 100 <- Minus
chr2R 15202421..15202512 1057..1148 100 <- Minus
chr2R 15204716..15204810 962..1056 100 <- Minus
chr2R 15205247..15205513 695..961 100 <- Minus
chr2R 15205573..15205674 593..694 100 <- Minus
chr2R 15206562..15206860 294..592 86 <- Minus
chr2R 15212372..15212663 1..293 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:07:50 Download gff for RE48016.complete
Subject Subject Range Query Range Percent Splice Strand
Rgk1-RA 1..353 240..592 100 -> Plus
Rgk1-RA 471..1614 593..1736 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:10:23 Download gff for RE48016.complete
Subject Subject Range Query Range Percent Splice Strand
Rgk1-RB 1..1497 240..1736 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:25:44 Download gff for RE48016.complete
Subject Subject Range Query Range Percent Splice Strand
Rgk1-RA 1..1497 240..1736 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:34:32 Download gff for RE48016.complete
Subject Subject Range Query Range Percent Splice Strand
Rgk1-RA 1..353 240..592 100 -> Plus
Rgk1-RA 471..1614 593..1736 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:56:18 Download gff for RE48016.complete
Subject Subject Range Query Range Percent Splice Strand
Rgk1-RA 1..1497 240..1736 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:07:50 Download gff for RE48016.complete
Subject Subject Range Query Range Percent Splice Strand
Rgk1-RA 1..591 2..592 99 -> Plus
Rgk1-RA 709..2057 593..1942 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:10:23 Download gff for RE48016.complete
Subject Subject Range Query Range Percent Splice Strand
Rgk1-RB 1..1939 2..1940 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:25:44 Download gff for RE48016.complete
Subject Subject Range Query Range Percent Splice Strand
Rgk1-RA 7..1946 1..1940 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:34:32 Download gff for RE48016.complete
Subject Subject Range Query Range Percent Splice Strand
Rgk1-RA 1..591 2..592 99 -> Plus
Rgk1-RA 709..2057 593..1942 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:56:18 Download gff for RE48016.complete
Subject Subject Range Query Range Percent Splice Strand
Rgk1-RA 7..1946 1..1940 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:23:18 Download gff for RE48016.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19312785..19312925 1478..1618 100 <- Minus
2R 19312995..19313130 1342..1477 100 <- Minus
2R 19312391..19312714 1619..1942 99 <- Minus
2R 19314561..19314753 1149..1341 100 <- Minus
2R 19315247..19315338 1057..1148 100 <- Minus
2R 19317542..19317636 962..1056 100 <- Minus
2R 19318073..19318339 695..961 100 <- Minus
2R 19318399..19318500 593..694 100 <- Minus
2R 19319388..19319686 294..592 100 <- Minus
2R 19325198..19325489 1..293 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:23:18 Download gff for RE48016.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19312785..19312925 1478..1618 100 <- Minus
2R 19312995..19313130 1342..1477 100 <- Minus
2R 19312391..19312714 1619..1942 99 <- Minus
2R 19314561..19314753 1149..1341 100 <- Minus
2R 19315247..19315338 1057..1148 100 <- Minus
2R 19317542..19317636 962..1056 100 <- Minus
2R 19318073..19318339 695..961 100 <- Minus
2R 19318399..19318500 593..694 100 <- Minus
2R 19319388..19319686 294..592 100 <- Minus
2R 19325198..19325489 1..293 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:23:18 Download gff for RE48016.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19312785..19312925 1478..1618 100 <- Minus
2R 19312995..19313130 1342..1477 100 <- Minus
2R 19312391..19312714 1619..1942 99 <- Minus
2R 19314561..19314753 1149..1341 100 <- Minus
2R 19315247..19315338 1057..1148 100 <- Minus
2R 19317542..19317636 962..1056 100 <- Minus
2R 19318073..19318339 695..961 100 <- Minus
2R 19318399..19318500 593..694 100 <- Minus
2R 19319388..19319686 294..592 100 <- Minus
2R 19325198..19325489 1..293 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:25:44 Download gff for RE48016.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15199896..15200219 1619..1942 99 <- Minus
arm_2R 15200290..15200430 1478..1618 100 <- Minus
arm_2R 15200500..15200635 1342..1477 100 <- Minus
arm_2R 15202066..15202258 1149..1341 100 <- Minus
arm_2R 15202752..15202843 1057..1148 100 <- Minus
arm_2R 15205047..15205141 962..1056 100 <- Minus
arm_2R 15205578..15205844 695..961 100 <- Minus
arm_2R 15205904..15206005 593..694 100 <- Minus
arm_2R 15206893..15207191 294..592 100 <- Minus
arm_2R 15212703..15212994 1..293 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:11:47 Download gff for RE48016.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19313590..19313913 1619..1942 99 <- Minus
2R 19313984..19314124 1478..1618 100 <- Minus
2R 19314194..19314329 1342..1477 100 <- Minus
2R 19315760..19315952 1149..1341 100 <- Minus
2R 19316446..19316537 1057..1148 100 <- Minus
2R 19318741..19318835 962..1056 100 <- Minus
2R 19319598..19319699 593..694 100 <- Minus
2R 19319272..19319538 695..961 100 <- Minus
2R 19320587..19320885 294..592 100 <- Minus
2R 19326397..19326688 1..293 99   Minus

RE48016.pep Sequence

Translation from 239 to 1735

> RE48016.pep
MAPFYKRICRSLSKRYKEPSLSLDNTVETLLIKNEGDFISVEQGKELVAR
KRNSQQLAHPPAHLHHHTQNHAHNHHTLQQQQHQQQQQQQHKRDENMRQL
LDVTNTLTIEELRDFQMRYGSPHHSRSQSVKMPGSRASGRPNQLCLPQQR
SRVASMPNTGVEEEYYRLRHFSITGKGVVNRGDSLKSRRSRSNNSVASSN
SSTEHLTTQQQLSAPASVSARTSLASSRESSTSNPGNGPYRVLMLGGPAV
GKSSLVSQFMTSEYLHAYDTSIDDESGEKAVSVLLSGEESELIFIDHGYT
EMTPDECLTNYDPHGYCVIYSAADRSSFSVAEQVLQVLWTNQNIAQKAVI
LVSNKADLARSRLVTSEEGKAMATAYDCKFIETSVGINHNVDELLVGLLS
QIRLKLENPEKSRDLFRKRSIRKSKRRACSPLNAGCLNANTPLGPLGEAV
ATPPGSAQSSPRKYRGSRTSTSLKVKGLLGRVWTRDSKSKSCENLHVL*

RE48016.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 21:12:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12615-PA 500 GF12615-PA 1..500 1..498 2335 94.8 Plus
Dana\GF11972-PA 744 GF11972-PA 427..744 143..498 711 46 Plus
Dana\GF21095-PA 869 GF21095-PA 355..640 133..410 490 42.3 Plus
Dana\GF12807-PA 316 GF12807-PA 102..316 240..498 371 39.3 Plus
Dana\GF13570-PA 257 GF13570-PA 53..216 240..405 229 32.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 21:12:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20915-PA 542 GG20915-PA 1..542 1..498 2431 90.2 Plus
Dere\GG21907-PA 742 GG21907-PA 425..742 143..498 713 46 Plus
Dere\GG18570-PA 1078 GG18570-PA 582..835 149..410 485 43.1 Plus
Dere\GG22105-PA 415 GG22105-PA 227..392 240..405 364 47.1 Plus
Dere\GG22302-PA 264 GG22302-PA 60..223 240..405 228 31.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 21:12:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21202-PA 522 GH21202-PA 1..522 1..498 2477 90.4 Plus
Dgri\GH22964-PA 759 GH22964-PA 442..759 143..498 700 45.5 Plus
Dgri\GH17909-PA 1003 GH17909-PA 468..748 148..404 482 38.2 Plus
Dgri\GH21863-PA 287 GH21863-PA 73..287 240..498 367 38.9 Plus
Dgri\GH19819-PA 265 GH19819-PA 63..226 240..405 233 33.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:13:58
Subject Length Description Subject Range Query Range Score Percent Strand
Rgk1-PA 498 CG44011-PA 1..498 1..498 2558 100 Plus
Rgk1-PC 514 CG44011-PC 1..514 1..498 2531 96.9 Plus
Rgk1-PB 1379 CG44011-PB 898..1379 17..498 2465 99.6 Plus
Rgk2-PA 740 CG34390-PA 431..740 150..498 692 46.5 Plus
Rgk2-PC 742 CG34390-PC 431..742 150..498 679 46.2 Plus
CG42541-PF 1399 CG42541-PF 825..1159 74..413 535 38.9 Plus
CG42541-PE 1417 CG42541-PE 843..1177 74..413 535 38.9 Plus
CG42541-PD 1417 CG42541-PD 843..1177 74..413 535 38.9 Plus
CG42541-PC 1418 CG42541-PC 844..1178 74..413 535 38.9 Plus
Rgk3-PE 486 CG34397-PE 80..486 84..498 470 36.3 Plus
Rgk3-PG 449 CG34397-PG 80..425 84..428 429 36.6 Plus
Rgk3-PF 449 CG34397-PF 80..425 84..428 429 36.6 Plus
Rgk3-PC 449 CG34397-PC 80..425 84..428 429 36.6 Plus
Ric-PB 264 CG8418-PB 60..223 240..405 225 31.7 Plus
Ric-PA 264 CG8418-PA 60..223 240..405 225 31.7 Plus
Rap1-PC 184 CG1956-PC 4..181 240..429 217 31.4 Plus
Rap1-PB 184 CG1956-PB 4..181 240..429 217 31.4 Plus
Rap1-PA 184 CG1956-PA 4..181 240..429 217 31.4 Plus
Rheb-PB 182 CG1081-PB 8..175 242..411 197 30 Plus
Rheb-PA 182 CG1081-PA 8..175 242..411 197 30 Plus
Rap2l-PA 182 CG3204-PA 4..173 240..411 196 29.5 Plus
Rala-PC 201 CG2849-PC 2..201 232..432 183 28.3 Plus
Rala-PA 201 CG2849-PA 2..201 232..432 183 28.3 Plus
CG8500-PB 233 CG8500-PB 19..231 240..462 174 28.5 Plus
CG8500-PA 233 CG8500-PA 19..231 240..462 174 28.5 Plus
Rala-PB 197 CG2849-PB 2..172 232..402 170 29.1 Plus
Ras85D-PA 189 CG9375-PA 4..183 240..427 155 26 Plus
Rab35-PB 201 CG9575-PB 9..199 240..429 153 26.7 Plus
Rab35-PD 201 CG9575-PD 9..199 240..429 153 26.7 Plus
Rab35-PA 201 CG9575-PA 9..199 240..429 153 26.7 Plus
CG8519-PA 207 CG8519-PA 17..205 241..442 153 25 Plus
Rap2l-PD 116 CG3204-PD 10..107 314..411 147 32.7 Plus
Rap2l-PC 116 CG3204-PC 10..107 314..411 147 32.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 21:12:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20491-PA 526 GI20491-PA 1..526 1..498 2205 88 Plus
Dmoj\GI18451-PA 763 GI18451-PA 446..763 143..498 701 45.2 Plus
Dmoj\GI16048-PA 485 GI16048-PA 4..282 148..411 497 42.1 Plus
Dmoj\GI20364-PA 443 GI20364-PA 190..443 240..498 364 40.7 Plus
Dmoj\GI20407-PA 267 GI20407-PA 63..226 240..405 231 32.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 21:12:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10448-PA 521 GL10448-PA 1..521 1..498 2200 88.9 Plus
Dper\GL17084-PA 750 GL17084-PA 433..750 143..498 699 45.5 Plus
Dper\GL14548-PA 709 GL14548-PA 248..520 147..411 462 42.3 Plus
Dper\GL19979-PA 262 GL19979-PA 60..223 240..405 233 32.3 Plus
Dper\GL21674-PA 182 GL21674-PA 8..175 242..411 199 31 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 21:12:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22051-PA 522 GA22051-PA 1..522 1..498 2199 88.5 Plus
Dpse\GA13469-PA 733 GA13469-PA 416..733 143..498 700 45.5 Plus
Dpse\GA23918-PA 525 GA23918-PA 64..336 123..411 465 42.6 Plus
Dpse\GA24688-PA 320 GA24688-PA 99..320 240..498 376 38.5 Plus
Dpse\GA21063-PA 262 GA21063-PA 60..223 240..405 233 32.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 21:12:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19838-PA 532 GM19838-PA 1..532 1..498 2561 91.1 Plus
Dsec\GM12712-PA 1068 GM12712-PA 572..825 149..410 489 43.5 Plus
Dsec\GM21897-PA 725 GM21897-PA 440..725 143..498 472 39.7 Plus
Dsec\GM15824-PA 281 GM15824-PA 97..256 240..405 359 49.4 Plus
Dsec\GM20091-PA 264 GM20091-PA 60..223 240..405 227 31.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 21:12:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25328-PA 536 GD25328-PA 1..536 1..498 2355 91.8 Plus
Dsim\GD11394-PA 722 GD11394-PA 423..722 143..498 624 43.8 Plus
Dsim\GD16319-PA 1069 GD16319-PA 573..826 149..410 489 43.5 Plus
Dsim\GD11581-PA 281 GD11581-PA 97..256 240..405 359 49.4 Plus
Dsim\GD25569-PA 264 GD25569-PA 60..223 240..405 227 31.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 21:12:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22341-PA 521 GJ22341-PA 1..521 1..498 2456 90.5 Plus
Dvir\GJ21536-PA 767 GJ21536-PA 450..767 143..498 696 44.7 Plus
Dvir\GJ15559-PA 1453 GJ15559-PA 1067..1239 240..415 422 46 Plus
Dvir\GJ22091-PA 297 GJ22091-PA 83..297 240..498 371 40.1 Plus
Dvir\GJ20079-PA 267 GJ20079-PA 63..226 240..405 232 32.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 21:12:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20802-PA 519 GK20802-PA 1..519 1..498 2213 89.2 Plus
Dwil\GK17958-PA 768 GK17958-PA 459..768 150..498 697 46.2 Plus
Dwil\GK15798-PA 445 GK15798-PA 231..445 240..498 377 40.1 Plus
Dwil\GK20561-PA 184 GK20561-PA 4..164 240..402 207 33.9 Plus
Dwil\GK22414-PA 182 GK22414-PA 8..175 242..411 193 32.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 21:12:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13853-PA 536 GE13853-PA 1..536 1..498 2386 91.4 Plus
Dyak\GE11981-PA 743 GE11981-PA 426..743 143..498 712 46 Plus
Dyak\GE16882-PA 1075 GE16882-PA 557..837 127..415 496 42.2 Plus
Dyak\GE12184-PA 324 GE12184-PA 97..324 240..498 362 37 Plus
Dyak\GE14098-PA 264 GE14098-PA 60..223 240..405 228 31.7 Plus

RE48016.hyp Sequence

Translation from 239 to 1735

> RE48016.hyp
MAPFYKRICRSLSKRYKEPSLSLDNTVETLLIKNEGDFISVEQGKELVAR
KRNSQQLAHPPAHLHHHTQNHAHNHHTLQQQQHQQQQQQQHKRDENMRQL
LDVTNTLTIEELRDFQMRYGSPHHSRSQSVKMPGSRASGRPNQLCLPQQR
SRVASMPNTGVEEEYYRLRHFSITGKGVVNRGDSLKSRRSRSNNSVASSN
SSTEHLTTQQQLSAPASVSARTSLASSRESSTSNPGNGPYRVLMLGGPAV
GKSSLVSQFMTSEYLHAYDTSIDDESGEKAVSVLLSGEESELIFIDHGYT
EMTPDECLTNYDPHGYCVIYSAADRSSFSVAEQVLQVLWTNQNIAQKAVI
LVSNKADLARSRLVTSEEGKAMATAYDCKFIETSVGINHNVDELLVGLLS
QIRLKLENPEKSRDLFRKRSIRKSKRRACSPLNAGCLNANTPLGPLGEAV
ATPPGSAQSSPRKYRGSRTSTSLKVKGLLGRVWTRDSKSKSCENLHVL*

RE48016.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:39:58
Subject Length Description Subject Range Query Range Score Percent Strand
Rgk1-PA 498 CG44011-PA 1..498 1..498 2558 100 Plus
Rgk1-PC 514 CG44011-PC 1..514 1..498 2531 96.9 Plus
Rgk1-PB 1379 CG44011-PB 898..1379 17..498 2465 99.6 Plus
Rgk2-PA 740 CG34390-PA 431..740 150..498 692 46.5 Plus
Rgk2-PC 742 CG34390-PC 431..742 150..498 679 46.2 Plus