Clone RE48393 Report

Search the DGRC for RE48393

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:483
Well:93
Vector:pFlc-1
Associated Gene/TranscriptCG12206-RA
Protein status:RE48393.pep: gold
Preliminary Size:1446
Sequenced Size:2430

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12206 2002-01-01 Sim4 clustering to Release 2
CG12206 2003-01-01 Sim4 clustering to Release 3
CG12206 2003-07-07 Blastp of sequenced clone
CG12206 2008-04-29 Release 5.5 accounting
CG12206 2008-08-15 Release 5.9 accounting
CG12206 2008-12-18 5.12 accounting

Clone Sequence Records

RE48393.complete Sequence

2430 bp (2430 high quality bases) assembled on 2003-07-07

GenBank Submission: BT009989

> RE48393.complete
AGTTGCCAGCGCGATTTTGAATGGATTGTACGCGCGGCGAGTTCTCAAAA
GTCGTGTTTTCAAGCCGATATACATGTGCATATATATACATATATATTAC
ATATAGTAACTGAAGAATCCCAACGAAAGATCAAAGATTGATAAGGCAAC
TGCGGCAATTACTTCAATCGTATGCAGGCGGCATTCTAACTGTAAAGCAC
TTGGCAACGGTCAACGGCAGAGACAGAGGCAGAGGCAGAGGCAGCTGCAA
GTGGAACGCACAGGAGCAACATCATTAGCCGGCACTTGATTGCATCAGCT
TGGAGGCACGAGATCTAGGCACTGGATATCTGAAATCGGATATCGACAAC
CAGATGCTGCAGAACCATGGCGGCAATTACTAGCAATGTGTCGCGATTGG
AGCCAATGCGCGGTATTTCCATAATCATTGAATCGCCAGAAGTGGCAACG
GCAACACCACCACCAGCAACAACAACCGCAACTGCCGAAGCAGAAGCCGC
AACAAAACAAGTAGCACCAACTGCCAAGAGCAACAGCAACACTGAAATGT
CGCTCAAGTCACAGGCTGCTGGCATGTTGCTGGCATTTGGCGACACAGCA
GCAACAGCCAAAGATAATTTGGAAACTAGTTACGACACTGCAGCAAAGTC
GACAGCAGCACCAGAGACCAACAAAATCTATCCGCAGTTACTGTTGCGCA
TTGGCGGAGAAATTGCCGGTGCAACAGCATCAGCAGAAGCAGCAGCATCA
GCAGCAACAGCAGCAGCAGCAACAGCAACATCACCGACCATAATCAGCTG
CAATGGTGAAATTGCCGCCAGTCAAGCAGCAGCAACAGCAGCGGACACAG
CGGCAACATTGCAACACAACAATACGGTGAAGATTCAAATCGAAAGCCAG
GGTCAGCAGCGAACACTGGGCAAGCAGATAAGTGTGGTGAAGCTGAACGA
GGGCGTGGAGGAGATGCAGCAGCACATGTGCTATTTGGTGGACACCAGTG
GCCAGTACTCGCCCTGCGAGACCTTGGACAGTGGCACGGGCAGCGATCTG
GAGAATCATCCGCAGCAGCAGCAGCAGCCGCAACAGGTGAGATCACCGCA
ACTGGAGCTTCATCTGCAGACCACGCGGCTGATGGTCAACGAGGAGGCGG
ACCATAAGCACAGCCCGCTGGAGACGCCGAGTCCCGTTCCGAAGCGAGCA
TATAGCCTCACCGATGACAGCGAGGAATGCGATGAGAGCAGCAACTCATC
GCTAAGCTGCGATTCCCTGCACTCTGGTGGCCTGCTGCCCACTACCCTGC
TGCGGGATATTCGATTCAGGGAACGAGCGTCCGGTCCTCTGGTCACCAAA
ATCAATGGCAGACCATTGCAATTCGAAACGGATGGCTATTACACATTCCA
TGTGCGCGAACACGAGAATTTCCGGAGTTTTGGTTCCAATTCCTCGACGG
AATACGAAGCGCAGCACTTTACGGATGAGCAGCCGGGTGAGGATTTTGTT
GGCTTTCGTGACATTCGAACGGCGGGCAAGCTCGCCGGCAATTCTACAAT
TAAATCCGCCAAGGGAACCGTACGGGGCGTCAAGAATCGTGTGCGCAATG
GAGTAGCCACCTTCTTGCAACTGCAACAGCCCAATGTCAAGAACTATATG
GAGAAGGATGTGGGCAAAGTGGTTTTGTACACCACCAGCATGGGCATCAT
CAGGGACACATATGCCAAGTGTGCCAATGTTAAAAAGATTCTGCGCACAC
TGCTAATTAAATTCGAGGAGAGGGACATTTTTATGAGCGTGGAGTATCAG
CAGGAAATGCGCGAAAGGATGCAGGACGAGACCATCCGGGTGCCACAGCT
CTTCGTCGAGGGTCAGCTCATCGGGGATGCCAATATCGTTGAGCGTCTGA
ATGAAAGTGGTGAGCTGCGACAGCTGTTGAGACCGTATAAATCGATTGCC
ACGGCGTATACGTGCCAAACTTGCGGCGGATATCGCATGCTGCCGTGCCC
CGCGTGCAACGGTTCCAAGAAGTCAATGCACCGGAATCACTTTACGGCGG
AGTTTGTGGCACTAAAATGCATGAATTGCGATGAAGTCGGGCTGATTAAA
TGCCCGAATTGCTGAGGAAAACGCTACAAAGCTTTTTTCTAGCTATAGTG
CTTTTTTTTTCTATCTATATCGAAGACATATTTTTTTTTTTTTGTGCGCA
ACTTTTGTAGTCGCTTATTATTAACAGTTGTGATATTTGAGAGCAGTTAG
AGCCGATAAGGAGCGGCCGAAACGGATGCGAAACGAAAAGGAACGGAACG
GAACGAAACGGAACGGAAACGACACACACACACACACACACACACACACA
CACACACATAAAACATGTTCACGTATGTGAATCGAACAAATAAAAAACGA
ATTAGGCATTATGAAAAAAAAAAAAAAAAA

RE48393.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:00:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG12206-RA 2412 CG12206-RA 1..2412 1..2413 12025 99.9 Plus
CG12206-RB 2904 CG12206-RB 506..2775 144..2414 11315 99.9 Plus
CG12206-RC 2445 CG12206-RC 115..2384 144..2414 11315 99.9 Plus
CG12206-RB 2904 CG12206-RB 126..268 1..143 715 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:47:00
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 3365395..3366898 1641..144 7380 99.5 Minus
chrX 22417052 chrX 3359262..3359716 2413..1942 1915 94.7 Minus
chrX 22417052 chrX 3359907..3360143 1876..1640 1185 100 Minus
chr3R 27901430 chr3R 1976246..1976722 2116..1640 765 77.4 Minus
chrX 22417052 chrX 3367905..3368047 143..1 715 100 Minus
chrX 22417052 chrX 3359779..3359845 1941..1875 335 100 Minus
chr3R 27901430 chr3R 1981834..1981910 1630..1554 250 88.3 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:59:26 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:46:55
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 3471874..3473371 1641..144 7490 100 Minus
X 23542271 X 3465736..3466207 2414..1942 2315 99.8 Minus
X 23542271 X 3466398..3466634 1876..1640 1185 100 Minus
3R 32079331 3R 6150574..6151050 2116..1640 765 77.4 Minus
X 23542271 X 3474378..3474520 143..1 715 100 Minus
X 23542271 X 3466270..3466336 1941..1875 335 100 Minus
3R 32079331 3R 6156180..6156256 1630..1554 250 88.3 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:19:04
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 3479972..3481469 1641..144 7490 100 Minus
X 23527363 X 3473834..3474305 2414..1942 2325 99.7 Minus
X 23527363 X 3474496..3474732 1876..1640 1185 100 Minus
X 23527363 X 3482476..3482618 143..1 715 100 Minus
3R 31820162 3R 5891405..5891684 2116..1837 470 77.8 Minus
3R 31820162 3R 5891697..5891881 1824..1640 370 80 Minus
X 23527363 X 3474368..3474434 1941..1875 335 100 Minus
3R 31820162 3R 5897011..5897087 1630..1554 250 88.3 Minus
Blast to na_te.dros performed 2019-03-15 22:46:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2305..2982 444..1102 421 56.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6736..6921 721..915 323 66.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..6923 638..842 307 65.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2445..2869 446..871 305 56.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2348..2627 721..998 304 60.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6661..6921 601..874 302 62.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6942 747..974 288 62.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2358..2886 596..1114 285 55.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..6864 724..869 281 69.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2315..2517 721..916 276 63.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2302..2527 645..871 266 62.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2482 745..922 255 65.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2430..2951 437..923 251 56.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6761..7221 437..895 250 55.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6799..7007 445..662 248 61.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6758..7032 596..871 242 59.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6721..6828 436..541 237 72.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6643..7180 373..927 215 54.8 Plus
roo 9092 roo DM_ROO 9092bp 1059..1159 756..859 196 70.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2397..2809 446..871 188 54.8 Plus
roo 9092 roo DM_ROO 9092bp 1061..1149 452..541 187 70.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2622..3031 446..837 185 55.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2785..2889 438..540 178 66 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6827..6996 437..606 174 60.6 Plus
roo 9092 roo DM_ROO 9092bp 1091..1158 437..504 169 72.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1486..1596 437..547 168 67.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..6822 757..871 164 67.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2401 775..871 157 67.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..6843 992..1118 146 58.3 Plus
roo 9092 roo DM_ROO 9092bp 1104..1173 825..895 136 69.4 Plus
roo 9092 roo DM_ROO 9092bp 1025..1146 735..858 134 65.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6860..6947 437..527 133 62.6 Plus
roo 9092 roo DM_ROO 9092bp 1115..1173 437..495 133 69.5 Plus
Doc3-element 4740 Doc3-element DOC3 4740bp 510..568 446..504 133 69.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1521..1587 419..491 126 68.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6756..6856 825..927 123 61.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1524..1613 446..529 119 65.6 Plus
Doc3-element 4740 Doc3-element DOC3 4740bp 499..561 423..485 117 65.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6724..6774 814..866 116 71.7 Plus
roo 9092 roo DM_ROO 9092bp 1092..1125 825..858 116 82.4 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3192..3316 729..858 115 58.8 Plus

RE48393.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:48:10 Download gff for RE48393.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 3366316..3366494 542..720 99 == Minus
chrX 3359392..3359716 1942..2267 97 <- Minus
chrX 3359779..3359844 1876..1941 100 <- Minus
chrX 3359908..3360141 1642..1875 100 <- Minus
chrX 3365395..3366255 781..1641 100 == Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:19:42 Download gff for RE48393.complete
Subject Subject Range Query Range Percent Splice Strand
CG12206-RC 1..1749 367..2115 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:00:14 Download gff for RE48393.complete
Subject Subject Range Query Range Percent Splice Strand
CG12206-RC 1..1749 367..2115 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:31:49 Download gff for RE48393.complete
Subject Subject Range Query Range Percent Splice Strand
CG12206-RA 1..1749 367..2115 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:44:14 Download gff for RE48393.complete
Subject Subject Range Query Range Percent Splice Strand
CG12206-RC 1..1749 367..2115 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:34:24 Download gff for RE48393.complete
Subject Subject Range Query Range Percent Splice Strand
CG12206-RA 1..1749 367..2115 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:15:42 Download gff for RE48393.complete
Subject Subject Range Query Range Percent Splice Strand
CG12206-RA 1..2412 1..2413 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:00:14 Download gff for RE48393.complete
Subject Subject Range Query Range Percent Splice Strand
CG12206-RA 1..2412 1..2413 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:31:49 Download gff for RE48393.complete
Subject Subject Range Query Range Percent Splice Strand
CG12206-RA 5..2416 1..2413 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:44:14 Download gff for RE48393.complete
Subject Subject Range Query Range Percent Splice Strand
CG12206-RA 1..2412 1..2413 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:34:24 Download gff for RE48393.complete
Subject Subject Range Query Range Percent Splice Strand
CG12206-RA 5..2416 1..2413 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:48:10 Download gff for RE48393.complete
Subject Subject Range Query Range Percent Splice Strand
X 3471874..3473371 144..1641 100 <- Minus
X 3465737..3466207 1942..2413 99 <- Minus
X 3466270..3466335 1876..1941 100 <- Minus
X 3466399..3466632 1642..1875 100 <- Minus
X 3474378..3474520 1..143 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:48:10 Download gff for RE48393.complete
Subject Subject Range Query Range Percent Splice Strand
X 3471874..3473371 144..1641 100 <- Minus
X 3465737..3466207 1942..2413 99 <- Minus
X 3466270..3466335 1876..1941 100 <- Minus
X 3466399..3466632 1642..1875 100 <- Minus
X 3474378..3474520 1..143 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:48:10 Download gff for RE48393.complete
Subject Subject Range Query Range Percent Splice Strand
X 3471874..3473371 144..1641 100 <- Minus
X 3465737..3466207 1942..2413 99 <- Minus
X 3466270..3466335 1876..1941 100 <- Minus
X 3466399..3466632 1642..1875 100 <- Minus
X 3474378..3474520 1..143 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:31:49 Download gff for RE48393.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 3359770..3360240 1942..2413 99 <- Minus
arm_X 3360303..3360368 1876..1941 100 <- Minus
arm_X 3360432..3360665 1642..1875 100 <- Minus
arm_X 3365907..3367404 144..1641 100 <- Minus
arm_X 3368411..3368553 1..143 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:27:11 Download gff for RE48393.complete
Subject Subject Range Query Range Percent Splice Strand
X 3473835..3474305 1942..2413 99 <- Minus
X 3474368..3474433 1876..1941 100 <- Minus
X 3474497..3474730 1642..1875 100 <- Minus
X 3479972..3481469 144..1641 100 <- Minus
X 3482476..3482618 1..143 100   Minus

RE48393.pep Sequence

Translation from 366 to 2114

> RE48393.pep
MAAITSNVSRLEPMRGISIIIESPEVATATPPPATTTATAEAEAATKQVA
PTAKSNSNTEMSLKSQAAGMLLAFGDTAATAKDNLETSYDTAAKSTAAPE
TNKIYPQLLLRIGGEIAGATASAEAAASAATAAAATATSPTIISCNGEIA
ASQAAATAADTAATLQHNNTVKIQIESQGQQRTLGKQISVVKLNEGVEEM
QQHMCYLVDTSGQYSPCETLDSGTGSDLENHPQQQQQPQQVRSPQLELHL
QTTRLMVNEEADHKHSPLETPSPVPKRAYSLTDDSEECDESSNSSLSCDS
LHSGGLLPTTLLRDIRFRERASGPLVTKINGRPLQFETDGYYTFHVREHE
NFRSFGSNSSTEYEAQHFTDEQPGEDFVGFRDIRTAGKLAGNSTIKSAKG
TVRGVKNRVRNGVATFLQLQQPNVKNYMEKDVGKVVLYTTSMGIIRDTYA
KCANVKKILRTLLIKFEERDIFMSVEYQQEMRERMQDETIRVPQLFVEGQ
LIGDANIVERLNESGELRQLLRPYKSIATAYTCQTCGGYRMLPCPACNGS
KKSMHRNHFTAEFVALKCMNCDEVGLIKCPNC*

RE48393.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:14:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21786-PA 571 GF21786-PA 18..571 6..582 1411 55.3 Plus
Dana\GF18626-PA 435 GF18626-PA 17..435 205..582 1005 51.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:14:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18581-PA 587 GG18581-PA 1..587 1..582 2361 83.8 Plus
Dere\GG10566-PA 446 GG10566-PA 189..446 335..582 996 69.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:14:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12400-PA 717 GH12400-PA 21..717 13..582 1325 47.7 Plus
Dgri\GH14284-PA 472 GH14284-PA 226..472 335..582 1021 72.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:04:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG12206-PC 582 CG12206-PC 1..582 1..582 2978 100 Plus
CG12206-PB 582 CG12206-PB 1..582 1..582 2978 100 Plus
CG12206-PA 582 CG12206-PA 1..582 1..582 2978 100 Plus
CG31559-PA 454 CG31559-PA 19..454 208..582 950 48.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:14:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14338-PA 608 GI14338-PA 68..608 103..582 1356 56.7 Plus
Dmoj\GI23178-PA 483 GI23178-PA 239..483 335..582 1005 71.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:14:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12878-PA 612 GL12878-PA 1..612 61..582 1478 57 Plus
Dper\GL23481-PA 495 GL23481-PA 248..495 335..582 1013 73.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:14:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22613-PA 639 GA22613-PA 19..639 60..582 1489 56.1 Plus
Dpse\GA16323-PA 490 GA16323-PA 243..490 335..582 1012 73.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:14:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12724-PA 585 GM12724-PA 1..585 1..582 2537 90.1 Plus
Dsec\GM10565-PA 451 GM10565-PA 197..451 335..582 998 70.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:14:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16330-PA 570 GD16330-PA 1..570 1..582 2524 88.7 Plus
Dsim\GD19557-PA 416 GD19557-PA 18..416 207..582 984 49.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:14:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19392-PA 714 GJ19392-PA 30..714 13..582 1366 47.2 Plus
Dvir\GJ14491-PA 456 GJ14491-PA 208..456 335..582 1035 73.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:14:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10147-PA 697 GK10147-PA 24..697 10..582 1447 51.1 Plus
Dwil\GK14208-PA 457 GK14208-PA 200..457 327..582 1022 71.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:14:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16893-PA 597 GE16893-PA 1..597 1..582 2341 84.1 Plus
Dyak\GE24113-PA 456 GE24113-PA 197..456 335..582 996 69.6 Plus

RE48393.hyp Sequence

Translation from 366 to 2114

> RE48393.hyp
MAAITSNVSRLEPMRGISIIIESPEVATATPPPATTTATAEAEAATKQVA
PTAKSNSNTEMSLKSQAAGMLLAFGDTAATAKDNLETSYDTAAKSTAAPE
TNKIYPQLLLRIGGEIAGATASAEAAASAATAAAATATSPTIISCNGEIA
ASQAAATAADTAATLQHNNTVKIQIESQGQQRTLGKQISVVKLNEGVEEM
QQHMCYLVDTSGQYSPCETLDSGTGSDLENHPQQQQQPQQVRSPQLELHL
QTTRLMVNEEADHKHSPLETPSPVPKRAYSLTDDSEECDESSNSSLSCDS
LHSGGLLPTTLLRDIRFRERASGPLVTKINGRPLQFETDGYYTFHVREHE
NFRSFGSNSSTEYEAQHFTDEQPGEDFVGFRDIRTAGKLAGNSTIKSAKG
TVRGVKNRVRNGVATFLQLQQPNVKNYMEKDVGKVVLYTTSMGIIRDTYA
KCANVKKILRTLLIKFEERDIFMSVEYQQEMRERMQDETIRVPQLFVEGQ
LIGDANIVERLNESGELRQLLRPYKSIATAYTCQTCGGYRMLPCPACNGS
KKSMHRNHFTAEFVALKCMNCDEVGLIKCPNC*

RE48393.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:18:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG12206-PC 582 CG12206-PC 1..582 1..582 2978 100 Plus
CG12206-PB 582 CG12206-PB 1..582 1..582 2978 100 Plus
CG12206-PA 582 CG12206-PA 1..582 1..582 2978 100 Plus
CG31559-PA 454 CG31559-PA 19..454 208..582 950 48.3 Plus