BDGP Sequence Production Resources |
Search the DGRC for RE49262
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 492 |
Well: | 62 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14356-RA |
Protein status: | RE49262.pep: gold |
Preliminary Size: | 638 |
Sequenced Size: | 753 |
Gene | Date | Evidence |
---|---|---|
CG14356 | 2001-12-16 | Blastp of sequenced clone |
CG14356 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14356 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14356 | 2008-04-29 | Release 5.5 accounting |
CG14356 | 2008-08-15 | Release 5.9 accounting |
CG14356 | 2008-12-18 | 5.12 accounting |
753 bp (753 high quality bases) assembled on 2001-12-16
GenBank Submission: AY071405
> RE49262.complete AGTCTGCTTCTGACATTCGCGCGCCGCGCTCGATCGCCGCTTTTAACGTC TGTGATACTCCGTTGCTATTGGCCAAAAAGGGCCAAAGTGCCGACAAGCG AAGCAAAGCGGCTTAGGTTCAAAAATAAATATATATATAGCTATATATTT CTTCGATTTTCGTGGAGCGAACTTGAGCTGGGATTTTAGCAAACGCAATG AAAACGATAAAACACACAATCGGCTTCCTACTGCTGGCAGCTTACCTTCC TTGCATGTCCTGGGCAGCTCCTGCCCTGCACTTCAGTGACCCAGAGCCCG ATGAACTGGAGGCCTATCCCACGTCGCCCAGTCAGGTGTTGCCCATACAA CCCGTGTTGATTTACCCCAAGCCACGTGAGAATCTCTACCAGGCGCGAAC TTTAGCTGGACGAAATGACGACCAGGACATCATCTTTGTGAAGCTGCTGC AGGATAAGTCCCATGGCTATCGGCCCAAGCAGCAACGTCTCGTCATGGAG GAGACGAAGTCCTCGCAGCGCAAAAATCTCGGCCTAAAGGACATATTCTA TGTGAAGGCGCTCACCAACGGACGATTTAGCCATGAGCGACTGAAGGTTT ACCGGGTGCCCGAGTTCTACGCCATCAGTGTTTTTAGCAACGGTGATAAA TGAGCAGAGACACCGGTTGTTGGCGATAAAAAAGGAGTAAAATAAGTTAT TTTTAAGATGCTATAAATAAATACCTCAGGCGTGCCCAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14356-RA | 853 | CG14356-RA | 1..739 | 1..739 | 3695 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 9955534..9956064 | 207..737 | 99 | <- | Minus |
chr3R | 9956721..9956926 | 1..206 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14356-RA | 1..456 | 198..653 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14356-RA | 1..456 | 198..653 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14356-RA | 1..456 | 198..653 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14356-RA | 1..456 | 198..653 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14356-RA | 1..456 | 198..653 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14356-RA | 1..737 | 1..737 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14356-RA | 1..737 | 1..737 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14356-RA | 1..737 | 1..737 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14356-RA | 1..737 | 1..737 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14356-RA | 4..740 | 1..737 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14130680..14131210 | 207..737 | 100 | <- | Minus |
3R | 14131864..14132069 | 1..206 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14130680..14131210 | 207..737 | 100 | <- | Minus |
3R | 14131864..14132069 | 1..206 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14130680..14131210 | 207..737 | 100 | <- | Minus |
3R | 14131864..14132069 | 1..206 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 9956402..9956932 | 207..737 | 100 | <- | Minus |
arm_3R | 9957586..9957791 | 1..206 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13871511..13872041 | 207..737 | 100 | <- | Minus |
3R | 13872695..13872900 | 1..206 | 100 | Minus |
Translation from 197 to 652
> RE49262.pep MKTIKHTIGFLLLAAYLPCMSWAAPALHFSDPEPDELEAYPTSPSQVLPI QPVLIYPKPRENLYQARTLAGRNDDQDIIFVKLLQDKSHGYRPKQQRLVM EETKSSQRKNLGLKDIFYVKALTNGRFSHERLKVYRVPEFYAISVFSNGD K*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18786-PA | 150 | GF18786-PA | 1..150 | 1..151 | 662 | 82.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21470-PA | 151 | GG21470-PA | 1..151 | 1..151 | 759 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19696-PA | 150 | GH19696-PA | 9..148 | 11..151 | 373 | 55.7 | Plus |
Dgri\GH23751-PA | 150 | GH23751-PA | 9..148 | 11..151 | 370 | 55.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14356-PA | 151 | CG14356-PA | 1..151 | 1..151 | 790 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24551-PA | 149 | GI24551-PA | 3..149 | 5..151 | 389 | 54.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23306-PA | 153 | GL23306-PA | 24..152 | 21..150 | 566 | 85.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12930-PA | 136 | GA12930-PA | 7..135 | 21..150 | 562 | 84.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25882-PA | 151 | GM25882-PA | 1..151 | 1..151 | 788 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20452-PA | 151 | GD20452-PA | 1..151 | 1..151 | 794 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22618-PA | 149 | GJ22618-PA | 27..149 | 21..151 | 411 | 65.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10905-PA | 151 | GK10905-PA | 14..151 | 11..151 | 444 | 66.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10057-PA | 151 | GE10057-PA | 1..151 | 1..151 | 767 | 94 | Plus |
Translation from 197 to 652
> RE49262.hyp MKTIKHTIGFLLLAAYLPCMSWAAPALHFSDPEPDELEAYPTSPSQVLPI QPVLIYPKPRENLYQARTLAGRNDDQDIIFVKLLQDKSHGYRPKQQRLVM EETKSSQRKNLGLKDIFYVKALTNGRFSHERLKVYRVPEFYAISVFSNGD K*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14356-PA | 151 | CG14356-PA | 1..151 | 1..151 | 790 | 100 | Plus |