Clone RE49422 Report

Search the DGRC for RE49422

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:494
Well:22
Vector:pFlc-1
Associated Gene/TranscriptCrzR-RA
Protein status:RE49422.pep: gold
Preliminary Size:1644
Sequenced Size:3245

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10698 2001-12-14 Blastp of sequenced clone
CG10698 2002-01-01 Sim4 clustering to Release 2
CG10698 2003-01-01 Sim4 clustering to Release 3
GRHRII 2008-04-29 Release 5.5 accounting
GRHRII 2008-08-15 Release 5.9 accounting
GRHRII 2008-12-18 5.12 accounting

Clone Sequence Records

RE49422.complete Sequence

3245 bp (3245 high quality bases) assembled on 2001-12-14

GenBank Submission: AY071408

> RE49422.complete
GCCAGAACTCGACGTGCCGCAGCGGTTGAAAAGCACGGAAAATTGGAAAA
CATATGCCAAGCACTTTCGCTGACGCTTGGATTTTGGGATTTTGAAGTGG
AAACCAGAGTTTGCTGGAGCAAAGTGATAAGATTGAGGAGTGAGAATTGC
CAGCGAAAAGGGCAAATAAAGGCCAAAGGCGTGCAAAGTGCATTTTTCGT
GCTCTCACAGAAAATACGATCCAAGTGGAATTTATGTAAATTATTAAATT
TAATTCAACTATTTAATACAACAGTCTAAGTGTGCATTTAACTGGTGAAA
ACAGTTTAAAACCAAAGCAGCAGCAAGTCTATTAAATAGAGATATTACAA
GCAAGCTTATTTATCCAACCTAAGCCAACTAAATGATGCAATGCTGGTGA
CATATAAAACGAAAGTGGAAACGGAGTTCATTCCTTAAGTAACCAATTTA
AGATGTTGTGCTCCCAAGATCCCTAAACCACCGTCCAAACCCTTCGAATA
ACTTATTTAAGCCAAGATATAGACAAAATGGAGGACGAGTGGGGCTCCTT
TGATCGTCTGCCCAGTGTTCCGAGTGCCTCGATGGATTTGGAGACGGAAA
ACGAGGTGGTCAGCAATTGGTCCACACTGGCCAACTTCACGCGACTTGTG
GCTGGTGCCGCTCCTGAAATCGTCAACTATACGCTCAACATGATCGACGT
GGGTGTGGGCATGGCCACGGATATATCCAATTTGAGCGTGAGCACCACGC
CCCTGCCCGCCTACGCAATCTCCAATAGCTCCTCACTGGCGCACACCAAT
AGTCGCCATGAAGCACCACCGATGGCGGAACAGGTTCCGGAGCACGTGAT
GGATCACGCACCTCAACTATCCCGATCCGGGTTGCTGAAAGTGTATGTCC
TGGCGGTAATGGCACTGTTCTCTCTGCTGGGCAACCTGCTGACCATCTGG
AATATCTACAAAACCCGCATCTCAAGAAGAAACTCACGGCACACGTGGAG
TGCTATCTACTCACTGATGTTCCATCTGTCCATCGCCGATGTCCTGGTCA
CCTGGTTCTGCATTATCGGGGAGGCCGCGTGGTGCTACACCGTCCAGTGG
CTGGCCAATGAGCTCACCTGCAAGCTGGTGAAGCTCTTCCAGATGTTTAG
CCTCTACCTGAGCACCTATGTCCTGGTCCTCATCGGAGTGGACCGCTGGA
TAGCGGTCAAGTATCCGATGAAGTCGCTCAACATGGCCAAGAGGTGTCAT
AGGCTACTTGGCGGTACTTACATCCTGTCGCTGGTGCTCAGCTTGCCACA
GTTCTTCATCTTCCATGTAGCGCGTGGCCCATTCGTGGAGGAGTTTTACC
AGTGCGTCACCCACGGATTCTACACGGCGGATTGGCAGGAGCAGATGTAC
GCCACCTTCACGCTGGTCTTCACCTTCCTGCTGCCGCTGTGCATCCTGTT
TGGCACCTACATGTCCACCTTCCGCACCATTTCCAGCAGCGAAAAGATGT
TCCAGGGATCAAAGTTGGCCAACTACTCAACGGCCAAATTGCCCACACAG
ACGAATCGCCAGAGGCTGATACACAAGGCCAAGATGAAGTCGCTTCGCAT
ATCCGTGGTGATCATCATAGCGTTTCTCATCTGCTGGACGCCCTACTACG
TCATGATGATTATGTTCATGTTCCTCAATCCGGACAAAAGGCTGGGCGAC
GATCTGCAGGACGCCATCTTCTTCTTCGGCATGTCAAACAGCCTGGTCAA
CCCACTCATCTACGGTGCCTTCCACCTGTGTCCTGGCAAAGGGGGCAAGT
CGAGCGGCGGGGGCGGCAACAACAACGCCTACAGCTTGAACAGGGGCGAC
TCGCAGCGCACTCCATCCATGCTAACGGCGGTGACGCAGGTGGACGGCAC
AGGTGGCAGTTCCCGCCAGATGCGGGCCTTCCGCCAGCAGAGCTACTACC
GCAGCTCCTCCAACGGCACAGCCGGACCGGGTGCAGCTCCCTTTAAGGAG
CAGGTTGGCCTGCTGCACGTGGGTCCCGGCAATGGGACGCCCGGTGGCTC
CGTCTCTAGCGGCGCCACGCCGCAGTTGATCCGTAAGGGATCGGCTCTGT
TGGCCCGACAACCCAGCTGTCTGAGGGAGCAGGAGCACCAGCAGCGTTTG
CTGCTGCACGAGAAGCCCTCGACCCTGGTGCTCAGCTACGACAGCCAGCG
GGGCGGAGTGGGCGTGGGCGTGGCCAGCGGTCTGCTGGACAACAACGAGC
GAGTGTCGAGCGTGTGAGAGCAGCTGGCGATGGCGGTAGCGGCGGCGGCG
GTGGCGGTGGATGCACCGGACACAGTAGAAGCAGCAGCAGCAACAGCATC
AGCCGATGCGGATGCGAATGTGGCGATGGAGGACGCCTGCTCCTGCTGCC
ATTGCCTGAGCAGGGAGCTGGTGCGGCGGCAGTTGGAGCTCCAAGTGCTT
CCAGTGCAGTGAGGCGACTGCCAGTGGATTTGATCCGGCTGGCTGAGTGG
CCGGAGCTGGGGATTCCAGCGATTCCCTCGGTCAACGTGGGGAGTGGCGT
CGATGATTAGATCACCGGGGCGTGCAACATGTGCTTAGATAGTGCTAATC
GAGAGTTAAGTCTTCAAACACAATGGGTGTGCTTAGAAGTAGCGTAGGAT
TAGAGCTAGTCCGTACGAAGTGGTTGCCCTACACTGGGAGAAACTCGTGG
TCACTTTGCATGTTCTCTGAATGTTCTACTAATACTTGACTTCAACAAGG
ATACAAATATAAGAGATAATATCTATGTACATCCCATAAAACCATAAAAA
ATTGCAATTAAATCTGGTTGTGAAAAAAATAGATTTAACTTCTGAATGTT
TCAAATGTTGCCAATTCGCCAGCGTGTAATCCGATATAAGCAACAATAAT
TACAATTATAATCAATGTGCAATCAGAGTCAGTTACAATTTACAATTATA
TGACTGAATAATTGGACTATGAATATATACGACTTCAAATGAGTTTCTCT
CATTAGCAGGGCAACTTTGTAATGTTAATTAACAGCGTTTTTCAGTTTTT
CATTTTGTTCCCCCAGCCGAGTAACTCAAAAATCGATTCTATAATTGTGT
AAAATAGAAATCATCTAAAAACAGGGTAAATCTAACTATTGTAAATACAT
TTACTCATTATTTTGAGAAGAATATTGTAAAAAAAAAAGATTGTAAAGTT
TAAAATAAATATGAGTTCATGTTCAACGACAAAAAAAAAAAAAAA

RE49422.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:44:19
Subject Length Description Subject Range Query Range Score Percent Strand
GRHRII-RA 3234 GRHRII-RA 5..3234 1..3230 16150 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:15:15
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 12329803..12331192 3230..1841 6905 99.8 Minus
chr3L 24539361 chr3L 12337883..12338830 1301..354 4545 98.6 Minus
chr3L 24539361 chr3L 12341876..12342230 355..1 1670 98 Minus
chr3L 24539361 chr3L 12332840..12333045 1691..1486 985 98.5 Minus
chr3L 24539361 chr3L 12333109..12333296 1486..1299 910 98.9 Minus
chr3L 24539361 chr3L 12331818..12331971 1844..1691 770 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:59:50 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:15:12
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12339115..12340505 3231..1841 6955 100 Minus
3L 28110227 3L 12347194..12348141 1301..354 4740 100 Minus
3L 28110227 3L 12351182..12351536 355..1 1775 100 Minus
3L 28110227 3L 12342158..12342363 1691..1486 1030 100 Minus
3L 28110227 3L 12342427..12342614 1486..1299 940 100 Minus
3L 28110227 3L 12341133..12341286 1844..1691 770 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:11:02
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 12332215..12333605 3231..1841 6955 100 Minus
3L 28103327 3L 12340294..12341241 1301..354 4740 100 Minus
3L 28103327 3L 12344282..12344636 355..1 1775 100 Minus
3L 28103327 3L 12335258..12335463 1691..1486 1030 100 Minus
3L 28103327 3L 12335527..12335714 1486..1299 940 100 Minus
3L 28103327 3L 12334233..12334386 1844..1691 770 100 Minus
Blast to na_te.dros performed 2019-03-16 02:15:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2281..2378 2259..2355 136 61.2 Plus
roo 9092 roo DM_ROO 9092bp 1051..1145 2258..2353 135 61.5 Plus
TAHRE 10463 TAHRE OSV 10463bp 6717..6807 3164..3079 128 63.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6733..6818 2267..2353 126 62.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2624..2655 2322..2353 124 87.5 Plus
roo 9092 roo DM_ROO 9092bp 1063..1112 2304..2353 124 72 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 1239..1514 2727..3005 120 54.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6736..6784 2313..2361 119 71.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6757..6805 2313..2361 119 71.4 Plus

RE49422.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:16:12 Download gff for RE49422.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 12332840..12333045 1486..1691 98 <- Minus
chr3L 12333110..12333293 1302..1485 98 <- Minus
chr3L 12329803..12331189 1844..3230 95 <- Minus
chr3L 12331819..12331970 1692..1843 100 <- Minus
chr3L 12337883..12338828 356..1301 98 <- Minus
chr3L 12341876..12342230 1..355 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:59:20 Download gff for RE49422.complete
Subject Subject Range Query Range Percent Splice Strand
GRHRII-RA 1..1740 528..2267 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:10:53 Download gff for RE49422.complete
Subject Subject Range Query Range Percent Splice Strand
GRHRII-RA 1..1740 528..2267 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:17:52 Download gff for RE49422.complete
Subject Subject Range Query Range Percent Splice Strand
CrzR-RB 1..1935 528..2462 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:35:06 Download gff for RE49422.complete
Subject Subject Range Query Range Percent Splice Strand
GRHRII-RA 1..1740 528..2267 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:02:19 Download gff for RE49422.complete
Subject Subject Range Query Range Percent Splice Strand
CrzR-RB 1..1935 528..2462 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:59:17 Download gff for RE49422.complete
Subject Subject Range Query Range Percent Splice Strand
GRHRII-RA 1..3234 1..3230 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:10:53 Download gff for RE49422.complete
Subject Subject Range Query Range Percent Splice Strand
GRHRII-RA 5..3234 1..3230 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:17:52 Download gff for RE49422.complete
Subject Subject Range Query Range Percent Splice Strand
CrzR-RA 9..3238 1..3230 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:35:06 Download gff for RE49422.complete
Subject Subject Range Query Range Percent Splice Strand
GRHRII-RA 1..3234 1..3230 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:02:19 Download gff for RE49422.complete
Subject Subject Range Query Range Percent Splice Strand
CrzR-RA 9..3238 1..3230 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:16:12 Download gff for RE49422.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12339116..12340502 1844..3230 100 <- Minus
3L 12341134..12341285 1692..1843 100 <- Minus
3L 12342158..12342363 1486..1691 100 <- Minus
3L 12342428..12342611 1302..1485 100 <- Minus
3L 12347194..12348139 356..1301 100 <- Minus
3L 12351182..12351536 1..355 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:16:12 Download gff for RE49422.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12339116..12340502 1844..3230 100 <- Minus
3L 12341134..12341285 1692..1843 100 <- Minus
3L 12342158..12342363 1486..1691 100 <- Minus
3L 12342428..12342611 1302..1485 100 <- Minus
3L 12347194..12348139 356..1301 100 <- Minus
3L 12351182..12351536 1..355 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:16:12 Download gff for RE49422.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12339116..12340502 1844..3230 100 <- Minus
3L 12341134..12341285 1692..1843 100 <- Minus
3L 12342158..12342363 1486..1691 100 <- Minus
3L 12342428..12342611 1302..1485 100 <- Minus
3L 12347194..12348139 356..1301 100 <- Minus
3L 12351182..12351536 1..355 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:17:52 Download gff for RE49422.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12332216..12333602 1844..3230 100 <- Minus
arm_3L 12334234..12334385 1692..1843 100 <- Minus
arm_3L 12335258..12335463 1486..1691 100 <- Minus
arm_3L 12335528..12335711 1302..1485 100 <- Minus
arm_3L 12340294..12341239 356..1301 100 <- Minus
arm_3L 12344282..12344636 1..355 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:12:21 Download gff for RE49422.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12332216..12333602 1844..3230 100 <- Minus
3L 12334234..12334385 1692..1843 100 <- Minus
3L 12335258..12335463 1486..1691 100 <- Minus
3L 12335528..12335711 1302..1485 100 <- Minus
3L 12340294..12341239 356..1301 100 <- Minus
3L 12344282..12344636 1..355 100   Minus

RE49422.pep Sequence

Translation from 527 to 2266

> RE49422.pep
MEDEWGSFDRLPSVPSASMDLETENEVVSNWSTLANFTRLVAGAAPEIVN
YTLNMIDVGVGMATDISNLSVSTTPLPAYAISNSSSLAHTNSRHEAPPMA
EQVPEHVMDHAPQLSRSGLLKVYVLAVMALFSLLGNLLTIWNIYKTRISR
RNSRHTWSAIYSLMFHLSIADVLVTWFCIIGEAAWCYTVQWLANELTCKL
VKLFQMFSLYLSTYVLVLIGVDRWIAVKYPMKSLNMAKRCHRLLGGTYIL
SLVLSLPQFFIFHVARGPFVEEFYQCVTHGFYTADWQEQMYATFTLVFTF
LLPLCILFGTYMSTFRTISSSEKMFQGSKLANYSTAKLPTQTNRQRLIHK
AKMKSLRISVVIIIAFLICWTPYYVMMIMFMFLNPDKRLGDDLQDAIFFF
GMSNSLVNPLIYGAFHLCPGKGGKSSGGGGNNNAYSLNRGDSQRTPSMLT
AVTQVDGTGGSSRQMRAFRQQSYYRSSSNGTAGPGAAPFKEQVGLLHVGP
GNGTPGGSVSSGATPQLIRKGSALLARQPSCLREQEHQQRLLLHEKPSTL
VLSYDSQRGGVGVGVASGLLDNNERVSSV*

RE49422.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 21:13:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24986-PA 593 GF24986-PA 1..593 1..579 2539 88.4 Plus
Dana\GF14951-PA 457 GF14951-PA 44..328 120..417 368 30.1 Plus
Dana\GF18226-PA 539 GF18226-PA 75..413 71..415 300 26.6 Plus
Dana\GF17259-PA 781 GF17259-PA 234..519 122..412 219 24.2 Plus
Dana\GF10462-PA 542 GF10462-PA 4..322 86..416 213 23.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 21:13:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13838-PA 580 GG13838-PA 1..580 1..579 3033 96.9 Plus
Dere\GG23593-PA 455 GG23593-PA 40..324 120..417 378 30 Plus
Dere\GG12210-PA 516 GG12210-PA 139..418 124..415 277 27.5 Plus
Dere\GG11982-PA 552 GG11982-PA 44..381 74..412 227 23.9 Plus
Dere\GG14716-PA 766 GG14716-PA 160..499 64..413 222 24 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 21:13:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16073-PA 595 GH16073-PA 1..595 1..579 2393 78.1 Plus
Dgri\GH11026-PA 441 GH11026-PA 44..328 120..417 354 29.8 Plus
Dgri\GH18151-PA 500 GH18151-PA 135..414 124..415 282 27.5 Plus
Dgri\GH18883-PA 771 GH18883-PA 213..500 122..413 228 24.4 Plus
Dgri\GH22190-PA 530 GH22190-PA 107..435 128..472 225 24.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:15:37
Subject Length Description Subject Range Query Range Score Percent Strand
CrzR-PB 644 CG10698-PB 1..579 1..579 3011 100 Plus
CrzR-PA 579 CG10698-PA 1..579 1..579 3011 100 Plus
AkhR-PD 443 CG11325-PD 40..398 120..513 432 28.6 Plus
AkhR-PB 443 CG11325-PB 40..398 120..513 432 28.6 Plus
AkhR-PA 443 CG11325-PA 40..398 120..513 432 28.6 Plus
AkhR-PC 455 CG11325-PC 40..398 120..513 432 28.6 Plus
CCAP-R-PC 494 CG33344-PC 129..408 124..415 296 27.5 Plus
TkR99D-PB 517 CG7887-PB 28..381 59..412 242 24.5 Plus
TkR99D-PA 519 CG7887-PA 28..381 59..412 242 24.5 Plus
TkR99D-PC 564 CG7887-PC 28..381 59..412 242 24.5 Plus
SIFaR-PC 758 CG10823-PC 157..495 64..412 235 24.1 Plus
SIFaR-PA 758 CG10823-PA 157..495 64..412 235 24.1 Plus
RYa-R-PA 464 CG5811-PA 108..383 122..412 227 23.4 Plus
RYa-R-PC 467 CG5811-PC 108..383 122..412 227 23.4 Plus
RYa-R-PB 518 CG5811-PB 108..383 122..412 227 23.4 Plus
TkR86C-PA 504 CG6515-PA 89..363 124..412 219 22.6 Plus
TkR86C-PB 555 CG6515-PB 89..363 124..412 219 22.6 Plus
Lkr-PA 542 CG10626-PA 5..322 87..416 217 25.2 Plus
Octbeta2R-PG 536 CG33976-PG 82..469 40..416 194 22.2 Plus
Octbeta2R-PE 536 CG33976-PE 82..469 40..416 194 22.2 Plus
Octbeta2R-PD 536 CG33976-PD 82..469 40..416 194 22.2 Plus
Octbeta2R-PC 536 CG33976-PC 82..469 40..416 194 22.2 Plus
Octbeta2R-PA 536 CG33976-PA 82..469 40..416 194 22.2 Plus
Octbeta2R-PF 630 CG33976-PF 82..469 40..416 194 22.2 Plus
Octbeta3R-PJ 445 CG42244-PJ 76..416 66..416 191 22.5 Plus
AstC-R1-PA 483 CG7285-PA 31..353 67..412 187 25.1 Plus
CCHa2-R-PB 477 CG14593-PB 57..438 107..511 183 22.9 Plus
CCHa2-R-PA 489 CG14593-PA 57..438 107..511 183 22.9 Plus
AstA-R1-PD 394 CG2872-PD 30..347 67..412 180 24 Plus
AstA-R1-PB 394 CG2872-PB 30..347 67..412 180 24 Plus
AstA-R2-PB 350 CG10001-PB 43..313 123..412 179 25.2 Plus
AstA-R2-PC 357 CG10001-PC 43..313 123..412 179 25.2 Plus
AstA-R2-PA 357 CG10001-PA 43..313 123..412 179 25.2 Plus
Octbeta1R-PB 421 CG6919-PB 89..408 102..416 174 23.1 Plus
Octbeta1R-PC 428 CG6919-PC 89..408 102..416 174 23.1 Plus
Octbeta1R-PE 508 CG6919-PE 89..408 102..416 174 23.1 Plus
Octbeta1R-PA 508 CG6919-PA 89..408 102..416 174 23.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 21:13:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12336-PA 608 GI12336-PA 26..608 19..579 2279 77.1 Plus
Dmoj\GI17543-PA 442 GI17543-PA 44..328 120..417 366 30.1 Plus
Dmoj\GI22912-PA 486 GI22912-PA 121..400 124..415 272 27.1 Plus
Dmoj\GI10832-PA 787 GI10832-PA 235..522 122..413 215 24.1 Plus
Dmoj\GI21970-PA 504 GI21970-PA 88..359 128..412 209 23.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 21:13:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24963-PA 591 GL24963-PA 1..591 1..579 2539 85.3 Plus
Dper\GL22022-PA 502 GL22022-PA 101..416 94..415 293 26.9 Plus
Dper\GL13493-PA 531 GL13493-PA 110..380 128..412 231 24.6 Plus
Dper\GL27160-PA 821 GL27160-PA 217..551 68..412 227 24.1 Plus
Dper\GL25969-PA 342 GL25969-PA 88..240 260..417 208 27.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 21:13:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10504-PA 591 GA10504-PA 1..591 1..579 2531 85.5 Plus
Dpse\GA10920-PA 472 GA10920-PA 44..328 120..417 397 30 Plus
Dpse\GA27348-PA 502 GA27348-PA 101..416 94..415 294 26.9 Plus
Dpse\GA20661-PB 533 GA20661-PB 110..380 128..412 230 24.6 Plus
Dpse\GA10579-PB 775 GA10579-PB 171..505 68..412 225 24.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 21:13:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24664-PA 579 GM24664-PA 1..579 1..579 3059 98.3 Plus
Dsec\GM13935-PA 377 GM13935-PA 2..330 166..517 381 29.7 Plus
Dsec\GM10207-PA 506 GM10207-PA 129..408 124..415 279 27.5 Plus
Dsec\GM15085-PA 762 GM15085-PA 161..499 64..412 224 24.1 Plus
Dsec\GM13917-PA 540 GM13917-PA 2..320 86..416 223 25.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 21:13:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12727-PA 579 GD12727-PA 1..579 1..579 3084 98.8 Plus
Dsim\GD22549-PA 455 GD22549-PA 40..408 120..517 391 28.4 Plus
Dsim\GD18159-PA 387 GD18159-PA 10..289 124..415 271 27.5 Plus
Dsim\GD17519-PA 552 GD17519-PA 111..381 128..412 222 24.6 Plus
Dsim\GD13194-PA 542 GD13194-PA 4..322 86..416 222 25.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 21:13:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12227-PA 611 GJ12227-PA 11..611 10..579 2358 78.2 Plus
Dvir\GJ15464-PA 441 GJ15464-PA 44..400 120..488 396 27.7 Plus
Dvir\GJ23325-PA 501 GJ23325-PA 136..415 124..415 269 26.8 Plus
Dvir\GJ14438-PA 817 GJ14438-PA 253..539 122..412 227 24.1 Plus
Dvir\GJ14331-PA 539 GJ14331-PA 110..438 128..472 219 23.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 21:13:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12785-PA 616 GK12785-PA 30..616 18..579 2412 83.3 Plus
Dwil\GK24218-PA 462 GK24218-PA 44..328 120..417 405 30.4 Plus
Dwil\GK14383-PA 502 GK14383-PA 135..414 124..415 279 27.5 Plus
Dwil\GK12768-PA 781 GK12768-PA 233..518 122..412 218 23.6 Plus
Dwil\GK14085-PA 511 GK14085-PA 105..476 128..540 214 23.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 21:13:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20128-PA 602 GE20128-PA 1..602 1..579 2991 94.2 Plus
Dyak\GE18412-PA 455 GE18412-PA 40..324 120..417 371 29.9 Plus
Dyak\GE10655-PA 516 GE10655-PA 139..418 124..415 280 27.5 Plus
Dyak\GE10408-PA 554 GE10408-PA 21..381 29..412 229 23.8 Plus
Dyak\GE24999-PA 769 GE24999-PA 163..501 64..412 226 24.1 Plus

RE49422.hyp Sequence

Translation from 527 to 2266

> RE49422.hyp
MEDEWGSFDRLPSVPSASMDLETENEVVSNWSTLANFTRLVAGAAPEIVN
YTLNMIDVGVGMATDISNLSVSTTPLPAYAISNSSSLAHTNSRHEAPPMA
EQVPEHVMDHAPQLSRSGLLKVYVLAVMALFSLLGNLLTIWNIYKTRISR
RNSRHTWSAIYSLMFHLSIADVLVTWFCIIGEAAWCYTVQWLANELTCKL
VKLFQMFSLYLSTYVLVLIGVDRWIAVKYPMKSLNMAKRCHRLLGGTYIL
SLVLSLPQFFIFHVARGPFVEEFYQCVTHGFYTADWQEQMYATFTLVFTF
LLPLCILFGTYMSTFRTISSSEKMFQGSKLANYSTAKLPTQTNRQRLIHK
AKMKSLRISVVIIIAFLICWTPYYVMMIMFMFLNPDKRLGDDLQDAIFFF
GMSNSLVNPLIYGAFHLCPGKGGKSSGGGGNNNAYSLNRGDSQRTPSMLT
AVTQVDGTGGSSRQMRAFRQQSYYRSSSNGTAGPGAAPFKEQVGLLHVGP
GNGTPGGSVSSGATPQLIRKGSALLARQPSCLREQEHQQRLLLHEKPSTL
VLSYDSQRGGVGVGVASGLLDNNERVSSV*

RE49422.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:32:37
Subject Length Description Subject Range Query Range Score Percent Strand
CrzR-PB 644 CG10698-PB 1..579 1..579 3011 100 Plus
CrzR-PA 579 CG10698-PA 1..579 1..579 3011 100 Plus
AkhR-PD 443 CG11325-PD 40..398 120..513 432 28.6 Plus
AkhR-PB 443 CG11325-PB 40..398 120..513 432 28.6 Plus
AkhR-PA 443 CG11325-PA 40..398 120..513 432 28.6 Plus