BDGP Sequence Production Resources |
Search the DGRC for RE49431
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 494 |
Well: | 31 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG7328-RA |
Protein status: | RE49431.pep: gold |
Preliminary Size: | 921 |
Sequenced Size: | 1311 |
Gene | Date | Evidence |
---|---|---|
CG7328 | 2001-12-14 | Blastp of sequenced clone |
CG7328 | 2002-01-01 | Sim4 clustering to Release 2 |
CG7328 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7328 | 2008-04-29 | Release 5.5 accounting |
CG7328 | 2008-08-15 | Release 5.9 accounting |
CG7328 | 2008-12-18 | 5.12 accounting |
1311 bp (1311 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071409
> RE49431.complete ATTGGCTATAGCGGAGCTCCAAAGTTAATATTAATAATTTTAAGTTAAGC AAGGAAATGACAGATTTTCAGTAAAAAAATAATTTAGAATATATGAAATA TTGATTATACTTACTTTACATGTAGAAAGTACCAACATCGAAACACTAAC TTTAACACCAGAACGACCTCATTAATGAATAGAAAGTAAATAATTTTTGA GTGAACAAAATACCAGATTAAGATGACCCAAGTGAAATCTGTACTTTGCG TGGGTTGCACGGTGATTGACTTCGTGACCATCAATGGGAGCTATCCTATG GAGGACACCGATCGGCGATGCCTGGATGGGTTCTGGCAACGTGGCGGAAA CGCCTCTAATGTGAGTACTGTGCTCCGGGTTCTTGGATGCAAGGTGGACT TCTTTGGAATGCTCAGCAGGTCGGATGGATTCCGAGTGCTTCTCGACGAT CTCTCGAAGCGGGAAATCGGCACGAATGACTGTCCCTTCACGGACAGGGA TCCGCCATTCTCCTCTGTGATCCTGGCTCAGGATTCCGGCACCCGCACCA TTATCCACTGCAATAAGGACTACCCGCAGACCACCTATGAGGACTTCAGC AAGATAAACCTTTCGCAGTATGGATGGGTACACTTCGAGGCTCGCAACAC GCCGCACACCTTAAAGATGATGCAAAGCATCCGGGAGTACAACCAAAGGA CCGGACAAGGCATCATTATCTCGTTGGACTTCGAAACGAGGTATGAACAA AACCAGGAATTGTGTGCGCCCTGCGATTTTGTGGTCTTCTCCAAGGAGCT GGCTGGTCAGTTGGGTTGGAAGACACCGCGGCAGTCGTGCGAGGAGTTGG CCTCCAAAATTCCCGAAGGTGGTCCAAAGCCTGTCTTCATTTGTCCCTGG GGAAGCGCCGGAGCTGGAGCTATGGATGCTAATGGAAACTACTATGAAAT GTCGTCCTATAAACAGGACAAGGTAGTTGACACGCTGGGAGCCGGGGACA GTTTCATGGCGGGATTCATCTACGCCACCCTCAAGGCTCGTCGAAGTCTA GCGGAGGCTGTTGACTTTGCCAACCGAGTTGCCAGTCACAAAATCACTGG ATTCGGCTACGAACACATTTCCCAGCTTAGCTTAACCAAGTAAATATTGG TTTAATTCTAGCTTAGATTAAGTCACATTGAAGGAATTTATTAAGATAAA AGCCTGGCAACAAAAATAGCAAATTGCATTAAATATTATATTGATTGTTA AACAGAATAAACTAATACGTGCATCACGCTCAATTATGAATGCTTTAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7328-RA | 1300 | CG7328-RA | 1..1300 | 1..1300 | 6500 | 100 | Plus |
CG7328.b | 1244 | CG7328.b | 361..1244 | 417..1300 | 4420 | 100 | Plus |
CG7328.c | 1241 | CG7328.c | 361..1241 | 420..1300 | 4405 | 100 | Plus |
CG7328.c | 1241 | CG7328.c | 1..362 | 1..362 | 1810 | 100 | Plus |
CG7328.b | 1244 | CG7328.b | 1..360 | 1..360 | 1800 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 20128491..20129786 | 1296..1 | 6450 | 99.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 20139206..20140505 | 1300..1 | 6500 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 20132306..20133605 | 1300..1 | 6500 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TAHRE | 10463 | TAHRE OSV 10463bp | 6701..6799 | 125..26 | 145 | 64.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 20128491..20129786 | 1..1296 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7328-RA | 1..921 | 223..1143 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7328-RA | 1..921 | 223..1143 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7328-RA | 1..921 | 223..1143 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7328-RA | 1..921 | 223..1143 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7328-RA | 1..921 | 223..1143 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7328-RA | 1..1296 | 1..1296 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7328-RA | 1..1296 | 1..1296 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7328-RA | 103..1398 | 1..1296 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7328-RA | 1..1296 | 1..1296 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7328-RA | 103..1398 | 1..1296 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20139210..20140505 | 1..1296 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20139210..20140505 | 1..1296 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20139210..20140505 | 1..1296 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 20132310..20133605 | 1..1296 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20132310..20133605 | 1..1296 | 100 | Minus |
Translation from 222 to 1142
> RE49431.pep MTQVKSVLCVGCTVIDFVTINGSYPMEDTDRRCLDGFWQRGGNASNVSTV LRVLGCKVDFFGMLSRSDGFRVLLDDLSKREIGTNDCPFTDRDPPFSSVI LAQDSGTRTIIHCNKDYPQTTYEDFSKINLSQYGWVHFEARNTPHTLKMM QSIREYNQRTGQGIIISLDFETRYEQNQELCAPCDFVVFSKELAGQLGWK TPRQSCEELASKIPEGGPKPVFICPWGSAGAGAMDANGNYYEMSSYKQDK VVDTLGAGDSFMAGFIYATLKARRSLAEAVDFANRVASHKITGFGYEHIS QLSLTK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24486-PA | 305 | GF24486-PA | 1..302 | 1..302 | 1163 | 68.5 | Plus |
Dana\GF24552-PA | 375 | GF24552-PA | 7..314 | 1..302 | 634 | 41.9 | Plus |
Dana\GF25264-PA | 327 | GF25264-PA | 18..323 | 5..304 | 609 | 41.2 | Plus |
Dana\GF24487-PA | 373 | GF24487-PA | 34..358 | 5..297 | 349 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13341-PA | 306 | GG13341-PA | 1..305 | 1..305 | 1574 | 94.1 | Plus |
Dere\GG15503-PA | 322 | GG15503-PA | 15..318 | 5..304 | 652 | 42.1 | Plus |
Dere\GG13921-PA | 381 | GG13921-PA | 7..316 | 1..304 | 625 | 41 | Plus |
Dere\GG13342-PA | 375 | GG13342-PA | 31..360 | 2..297 | 361 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15118-PA | 307 | GH15118-PA | 1..298 | 4..302 | 1020 | 61.7 | Plus |
Dgri\GH16650-PA | 379 | GH16650-PA | 7..318 | 1..303 | 627 | 40.1 | Plus |
Dgri\GH14844-PA | 322 | GH14844-PA | 15..316 | 5..302 | 617 | 37.7 | Plus |
Dgri\GH15119-PA | 374 | GH15119-PA | 33..361 | 7..299 | 325 | 24.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7328-PA | 306 | CG7328-PA | 1..306 | 1..306 | 1632 | 100 | Plus |
CG7551-PB | 322 | CG7551-PB | 15..318 | 5..304 | 660 | 42.1 | Plus |
CG12289-PA | 378 | CG12289-PA | 10..316 | 4..304 | 633 | 42 | Plus |
CG7335-PA | 372 | CG7335-PA | 31..357 | 5..297 | 348 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13769-PA | 310 | GI13769-PA | 1..301 | 1..302 | 1062 | 64 | Plus |
Dmoj\GI13697-PA | 379 | GI13697-PA | 7..314 | 1..304 | 630 | 39 | Plus |
Dmoj\GI11611-PA | 424 | GI11611-PA | 5..312 | 1..304 | 626 | 39 | Plus |
Dmoj\GI13699-PA | 322 | GI13699-PA | 15..316 | 5..302 | 560 | 37.7 | Plus |
Dmoj\GI13771-PA | 371 | GI13771-PA | 33..358 | 7..299 | 382 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25057-PA | 310 | GL25057-PA | 8..309 | 5..304 | 1188 | 73.2 | Plus |
Dper\GL22794-PA | 302 | GL22794-PA | 1..296 | 15..302 | 589 | 39.5 | Plus |
Dper\GL22827-PA | 192 | GL22827-PA | 10..188 | 4..180 | 405 | 43.6 | Plus |
Dper\GL25058-PA | 371 | GL25058-PA | 31..356 | 5..297 | 347 | 27 | Plus |
Dper\GL22825-PA | 219 | GL22825-PA | 10..137 | 4..131 | 312 | 44.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20264-PA | 310 | GA20264-PA | 8..309 | 5..304 | 1182 | 72.5 | Plus |
Dpse\GA23880-PA | 394 | GA23880-PA | 10..317 | 4..305 | 712 | 43.8 | Plus |
Dpse\GA20433-PA | 327 | GA20433-PA | 16..321 | 5..302 | 621 | 40.2 | Plus |
Dpse\GA20271-PA | 371 | GA20271-PA | 31..356 | 5..297 | 353 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22247-PA | 306 | GM22247-PA | 1..306 | 1..306 | 1613 | 97.1 | Plus |
Dsec\GM25272-PA | 322 | GM25272-PA | 15..318 | 5..304 | 675 | 42.1 | Plus |
Dsec\GM24754-PA | 378 | GM24754-PA | 7..316 | 1..304 | 643 | 42 | Plus |
Dsec\GM22248-PA | 372 | GM22248-PA | 31..357 | 5..297 | 358 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12218-PA | 306 | GD12218-PA | 1..306 | 1..306 | 1618 | 97.7 | Plus |
Dsim\GD14306-PA | 322 | GD14306-PA | 15..318 | 5..304 | 675 | 41.8 | Plus |
Dsim\GD12805-PA | 378 | GD12805-PA | 7..316 | 1..304 | 639 | 41.6 | Plus |
Dsim\GD12219-PA | 183 | GD12219-PA | 31..169 | 5..142 | 232 | 33.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13759-PA | 310 | GJ13759-PA | 1..301 | 1..302 | 1070 | 64.4 | Plus |
Dvir\GJ14039-PA | 322 | GJ14039-PA | 15..319 | 5..305 | 677 | 41.6 | Plus |
Dvir\GJ11289-PA | 420 | GJ11289-PA | 7..313 | 1..303 | 668 | 42 | Plus |
Dvir\GJ13760-PA | 370 | GJ13760-PA | 33..355 | 7..297 | 375 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17250-PA | 308 | GK17250-PA | 1..306 | 1..303 | 1126 | 67.6 | Plus |
Dwil\GK17169-PA | 418 | GK17169-PA | 7..316 | 1..304 | 831 | 49.4 | Plus |
Dwil\GK19276-PA | 327 | GK19276-PA | 15..324 | 5..305 | 709 | 44.2 | Plus |
Dwil\GK17251-PA | 698 | GK17251-PA | 31..360 | 5..292 | 361 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22430-PA | 306 | GE22430-PA | 1..306 | 1..306 | 1540 | 92.2 | Plus |
Dyak\GE21811-PA | 322 | GE21811-PA | 15..318 | 5..304 | 663 | 42.8 | Plus |
Dyak\GE23229-PA | 228 | GE23229-PA | 91..228 | 169..306 | 641 | 85.5 | Plus |
Dyak\GE20217-PA | 380 | GE20217-PA | 7..316 | 1..304 | 638 | 41.6 | Plus |
Dyak\GE23229-PA | 228 | GE23229-PA | 1..98 | 1..98 | 498 | 93.9 | Plus |
Dyak\GE22431-PA | 375 | GE22431-PA | 34..360 | 5..297 | 361 | 27.2 | Plus |
Translation from 222 to 1142
> RE49431.hyp MTQVKSVLCVGCTVIDFVTINGSYPMEDTDRRCLDGFWQRGGNASNVSTV LRVLGCKVDFFGMLSRSDGFRVLLDDLSKREIGTNDCPFTDRDPPFSSVI LAQDSGTRTIIHCNKDYPQTTYEDFSKINLSQYGWVHFEARNTPHTLKMM QSIREYNQRTGQGIIISLDFETRYEQNQELCAPCDFVVFSKELAGQLGWK TPRQSCEELASKIPEGGPKPVFICPWGSAGAGAMDANGNYYEMSSYKQDK VVDTLGAGDSFMAGFIYATLKARRSLAEAVDFANRVASHKITGFGYEHIS QLSLTK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7328-PA | 306 | CG7328-PA | 1..306 | 1..306 | 1632 | 100 | Plus |
CG7551-PB | 322 | CG7551-PB | 15..318 | 5..304 | 660 | 42.1 | Plus |
CG12289-PA | 378 | CG12289-PA | 10..316 | 4..304 | 633 | 42 | Plus |
CG7335-PA | 372 | CG7335-PA | 31..357 | 5..297 | 348 | 27.5 | Plus |