Clone RE49559 Report

Search the DGRC for RE49559

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:495
Well:59
Vector:pFlc-1
Associated Gene/TranscriptSpt5-RB
Protein status:RE49559.pep: validated full length
Sequenced Size:3130

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7626 2002-10-19 Blastp of sequenced clone
Spt5 2008-04-29 Release 5.5 accounting
Spt5 2008-08-15 Release 5.9 accounting
Spt5 2008-12-18 5.12 accounting

Clone Sequence Records

RE49559.complete Sequence

3130 bp (3130 high quality bases) assembled on 2006-06-05

GenBank Submission: BT001668

> RE49559.complete
AAAATTTACGACTGTCCACCACTGGCGTGGAAAGAATTACATTTTTTGCT
TTTGAACAATTCGCTTAGAAAATATCTAATTAAACATAAAGGAAATAGAC
TCACATAGACAATAATGTCGGACTCGGAAGTCAGTAATATGTCGGATAGT
GGCTCCGAAGATGGATCCATTTCCAACAAGTCGCAACGGAGTGCCCGCTC
CAAGTCAAGATCGCGTTCCAGGTCCGGTTCCAGGGGATCTCGCTCCGTTT
CCAGGTCCAGATCACGCTCTCAATCGGGCCACTCTAGATCTGGCTCGGAA
TCTCCACAGAGACGAGATAATCGCGGCAAGAGCGATGAATCCGGCGAAGA
GGAGGAGGAGCCACCAGGTGAGGACATCGATTCCGAGGAGTACGATGAGG
AGGAGAACGACGATCACCCAAGGAAGAAGAAAAAGAAGGAGCGTTTTGGG
GGCTTCATCATTGACGAGGCCGAAGTGGACGATGAAGTCGATGAAGATGA
CGAGTGGGAAGAGGGTGCCAATGAAATTGGCATTGTTGGCAATGAGATCG
ATGAGCTGGGCCCCACAGCCAGGGATATTGAAATTCGACGACGAGGCACA
AACCTTTGGGACACCCAAAAGGAGGACGAGATAGAGGAGTATCTCCGTAA
GAAGTACGCCGATGAGTCAATTGCAAAACGCCACTTTGGAGATGGCGGTG
AAGAGATGTCAGACGAAATTACCCAACAAACTCTATTGCCCGGCATCAAG
GATCCCAATTTGTGGATGGTGAAATGTCGTATAGGCGAGGAGAAGGCCAC
AGCGCTTCTTCTAATGCGAAAGTACTTAACCTACCTGAACACAGACGATC
CATTGCAAATCAAATCTATTATTGCACCAGAGGGCGTCAAGGGATACATT
TACCTGGAGGCCTATAAGCAGACTCATGTTAAAACTTGCATTGATAACGT
GGGTAATCTTCGGATGGGCAAATGGAAACAGGAAATGGTGCCCATCAAGG
AGATGACGGATGTGCTAAAGGTGGTCAAGGAGCAGGTTGGCCTTAAAGTG
AAACAATGGGTGCGCTTGAAGCGCGGTCTCTACAAGGACGACATCGCACA
GGTGGACTACGTGGATCTGGCCCAGAACCAAGTACATCTTAAGTTGCTTC
CTCGCATTGACTACACACGCATGCGAGGAGCCTTGCGAACAACAGCAACG
GAGAGTGACGATAGCAAGCGCAAGAAGAAACGCCGCCCAGCAGCTAAACC
TTTTGATCCAGAGGCCGTAAGGGCAATTGGAGGTGAAGTACACTCAGATG
GTGATTTCCTGCTCTTCGAGGGAAACCGGTATTCGCGAAAGGGATTCCTG
TATAAAAACTTTACCATGTCGGCCATTCTCTCGGACGGTGTAAAGCCCAC
TTTAGCCGAGCTAGAACGCTTTGAAGAATCTCCGGAAGAGGTAAACTTGG
AAATTATGGGCACCGTGAAGGATGATCCCACTATGGCTCACTCATTCTCA
ATGGGCGACAATGTGGAAGTCTGCGTGGGTGATTTGGAAAACTTACAGGC
CAAGATTGTGGCTATTGACGGCACCATGAATGGCAAGTGCATCGAGTGCA
AGCCAACTGCATTGCACAAGCGAAAGGAGAACCGTCATACGGTGGCTCTG
GATGCAGATCAAAACCAAATCCGCCGGCGCGATGTAGTCAAGGTGATGGA
GGGACCCCATGCAGGACGTTCCGGCGAGATCAAGCATTTGTATCGCAGTC
TGGCCTTTCTCCATTGCCGCATGTACACGGAGAACGGTGGAATATTTGTG
TGCAAGACTAGGCATTTGCAGTTGGCTGGAGGCAGCAAGACTACCGTTAG
TAATGCCGGCATTGTGGGCGGCCTAGGATTTATGTCGCCGCGCATTCAAT
CGCCCATGCATCCATCCGGTGGTCGTGGAGCTCGTGGTGGCGCCCGTGGT
GGACGAGGTGGTTTCCGAGTGACCCGTGACCGTGAGATCTTGGGTAAAAC
CATTAAGATTAGTGGAGGACCTTATAAGGGCGCCGTGGGAATTGTGAAGG
ATGCCACCGAGAGCACGGCTCGTGTGGAACTGCATACCTCATGCCAGACG
ATTTCGGTAGACCGGAATCACATTGCCATTGTGGGAGTTACCGGTAAAGA
GGGCAGTGTCTCCACATATGGACGCACCCCAGCTCGCACTCCCGGCTACG
GTGCCCAGACTCCCAGTTATACCGCTGCCGGATCGAAAACTCCGTTGGTG
GGAAGCCAGACGCCCAACTGGGATACGGATACTCGTACTCCTTATGGTAC
AATGACACCATCGCACGATGGCAGCATGACACCACGTCATGGCGCTTGGG
ATCCCACGGCAAACACAACGCCGGCCAGGAACAACGATTTCGATTACTCC
CTTGAGGAGCCCAGTCCCAGCCCTGGATACAATCCAAGTACCCCTGGCTA
TCAAATGACTTCCCAGTTTGCCCCGCAAACTCCTGGCACTCTGTATGGAT
CGGACAGAAGCTACAGTCCATTCAATCCCAGCCCCAGTCCTGCTCCGTCG
CCGTATCCCGTTGGTTACATGAACACTCCGTCGCCATCGACTTATTCACC
GAATACTCCTGGTGGCATACCGCAGTCGCCGTACAATCCGCAGACCCCTG
GAGCCAGTCTGGACTCGTCGATGGGCGACTGGTGTACCACAGACATTGAA
GTTCGGATTCACACGCACGACGACACCGATCTCGTTGGGCAAACGGGCAT
CATTCGCACCGTTTCGAACGGCGTCTGCTCCGTATTCCTGCGCCAGGAGG
ATCGCAGTGTGTCCATCGTTAGTGAGCACTTGGCGCCAGTGCTACCATGC
AATGGCGACGAATTCAAGATCATCTACGGCGATGACCGCGAGTCCGTGGG
CAGAGTGCTGTCCAAGGATGGCGATGTGTTCGTCTGCAGGATTAACGAGG
AAATCAAGCTGCTACCGATTAACTTCCTCTGCAAGATGAAGTCCATCGAC
TAAGCTCTACATACGAATTGATGCTACACACTTTAAAGTTGACGGACTTC
TTCAATGGAATACACATTATTGCTAAAATTAATAATTCAAATAAACTATT
ATGGACGTTTAAAGAAAAAAAAAAAAAAAA

RE49559.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:14:22
Subject Length Description Subject Range Query Range Score Percent Strand
Spt5-RA 3523 Spt5-RA 40..1617 2..1579 7875 99.9 Plus
Spt5-RA 3523 Spt5-RA 1961..3497 1575..3111 7685 100 Plus
Spt5.a 3430 Spt5.a 1895..3430 1575..3110 7680 100 Plus
Spt5.a 3430 Spt5.a 60..1551 88..1579 7415 99.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:21:05
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 15327601..15328327 1714..2440 3635 100 Plus
chr2R 21145070 chr2R 15328383..15329056 2438..3111 3355 99.9 Plus
chr2R 21145070 chr2R 15325938..15326389 750..1201 2245 99.8 Plus
chr2R 21145070 chr2R 15325108..15325498 98..488 1850 98.2 Plus
chr2R 21145070 chr2R 15326582..15326750 1270..1438 830 99.4 Plus
chr2R 21145070 chr2R 15326809..15326951 1437..1579 715 100 Plus
chr2R 21145070 chr2R 15327408..15327547 1575..1714 700 100 Plus
chr2R 21145070 chr2R 15325743..15325881 612..750 665 98.6 Plus
chr2R 21145070 chr2R 15325560..15325684 487..611 610 99.2 Plus
chr2R 21145070 chr2R 15324640..15324736 2..98 485 100 Plus
chr2R 21145070 chr2R 15326450..15326522 1200..1272 350 98.6 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:59:58 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:21:03
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19440444..19441170 1714..2440 3635 100 Plus
2R 25286936 2R 19441226..19441899 2438..3111 3370 100 Plus
2R 25286936 2R 19438785..19439236 750..1201 2260 100 Plus
2R 25286936 2R 19437955..19438345 98..488 1955 100 Plus
2R 25286936 2R 19439424..19439592 1270..1438 845 100 Plus
2R 25286936 2R 19439651..19439793 1437..1579 715 100 Plus
2R 25286936 2R 19440251..19440390 1575..1714 700 100 Plus
2R 25286936 2R 19438590..19438728 612..750 680 99.3 Plus
2R 25286936 2R 19438407..19438531 487..611 625 100 Plus
2R 25286936 2R 19437486..19437582 2..98 485 100 Plus
2R 25286936 2R 19439297..19439369 1200..1272 365 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:08:02
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 19441643..19442369 1714..2440 3635 100 Plus
2R 25260384 2R 19442425..19443098 2438..3111 3370 100 Plus
2R 25260384 2R 19439984..19440435 750..1201 2260 100 Plus
2R 25260384 2R 19439154..19439544 98..488 1955 100 Plus
2R 25260384 2R 19440623..19440791 1270..1438 845 100 Plus
2R 25260384 2R 19440850..19440992 1437..1579 715 100 Plus
2R 25260384 2R 19441450..19441589 1575..1714 700 100 Plus
2R 25260384 2R 19439789..19439927 612..750 680 99.2 Plus
2R 25260384 2R 19439606..19439730 487..611 625 100 Plus
2R 25260384 2R 19438685..19438781 2..98 485 100 Plus
2R 25260384 2R 19440496..19440568 1200..1272 365 100 Plus
Blast to na_te.dros performed on 2019-03-15 18:21:03 has no hits.

RE49559.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:22:07 Download gff for RE49559.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 15326584..15326750 1272..1438 99 -> Plus
chr2R 15326811..15326949 1439..1577 100 -> Plus
chr2R 15327411..15327546 1578..1713 100 -> Plus
chr2R 15324638..15324735 1..97 98 -> Plus
chr2R 15325108..15325496 98..486 98 -> Plus
chr2R 15325560..15325684 487..611 99 -> Plus
chr2R 15325743..15325880 612..749 98 -> Plus
chr2R 15325938..15326388 750..1200 99 -> Plus
chr2R 15326451..15326521 1201..1271 98 -> Plus
chr2R 15327601..15328324 1714..2437 100 -> Plus
chr2R 15328383..15329056 2438..3114 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:20:16 Download gff for RE49559.complete
Subject Subject Range Query Range Percent Splice Strand
Spt5-RB 1..2889 115..3003 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:23:50 Download gff for RE49559.complete
Subject Subject Range Query Range Percent Splice Strand
Spt5-RA 1..1463 115..1577 99 -> Plus
Spt5-RA 1812..3237 1578..3003 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:59:41 Download gff for RE49559.complete
Subject Subject Range Query Range Percent Splice Strand
Spt5-RA 1..1463 115..1577 99 -> Plus
Spt5-RA 1812..3237 1578..3003 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:42:40 Download gff for RE49559.complete
Subject Subject Range Query Range Percent Splice Strand
Spt5-RB 1..2889 115..3003 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:58:54 Download gff for RE49559.complete
Subject Subject Range Query Range Percent Splice Strand
Spt5-RA 1..1463 115..1577 99 -> Plus
Spt5-RA 1812..3237 1578..3003 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:52:06 Download gff for RE49559.complete
Subject Subject Range Query Range Percent Splice Strand
Spt5-RB 1..3112 1..3111 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:23:50 Download gff for RE49559.complete
Subject Subject Range Query Range Percent Splice Strand
Spt5-RA 1..1576 2..1577 99 -> Plus
Spt5-RA 1925..3457 1578..3110 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:59:41 Download gff for RE49559.complete
Subject Subject Range Query Range Percent Splice Strand
Spt5-RA 2..1579 1..1577 99 -> Plus
Spt5-RA 1928..3460 1578..3110 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:42:40 Download gff for RE49559.complete
Subject Subject Range Query Range Percent Splice Strand
Spt5-RB 1..3112 1..3111 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:58:54 Download gff for RE49559.complete
Subject Subject Range Query Range Percent Splice Strand
Spt5-RA 2..1579 1..1577 99 -> Plus
Spt5-RA 1928..3460 1578..3110 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:22:07 Download gff for RE49559.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19439426..19439592 1272..1438 100 -> Plus
2R 19439653..19439791 1439..1577 100 -> Plus
2R 19440254..19440389 1578..1713 100 -> Plus
2R 19438785..19439235 750..1200 100 -> Plus
2R 19437484..19437581 1..97 98 -> Plus
2R 19437955..19438343 98..486 100 -> Plus
2R 19438407..19438531 487..611 100 -> Plus
2R 19438590..19438727 612..749 99 -> Plus
2R 19439298..19439368 1201..1271 100 -> Plus
2R 19440444..19441167 1714..2437 100 -> Plus
2R 19441226..19441899 2438..3114 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:22:07 Download gff for RE49559.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19439426..19439592 1272..1438 100 -> Plus
2R 19439653..19439791 1439..1577 100 -> Plus
2R 19440254..19440389 1578..1713 100 -> Plus
2R 19438785..19439235 750..1200 100 -> Plus
2R 19437484..19437581 1..97 98 -> Plus
2R 19437955..19438343 98..486 100 -> Plus
2R 19438407..19438531 487..611 100 -> Plus
2R 19438590..19438727 612..749 99 -> Plus
2R 19439298..19439368 1201..1271 100 -> Plus
2R 19440444..19441167 1714..2437 100 -> Plus
2R 19441226..19441899 2438..3114 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:22:07 Download gff for RE49559.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19439426..19439592 1272..1438 100 -> Plus
2R 19439653..19439791 1439..1577 100 -> Plus
2R 19440254..19440389 1578..1713 100 -> Plus
2R 19438785..19439235 750..1200 100 -> Plus
2R 19437484..19437581 1..97 98 -> Plus
2R 19437955..19438343 98..486 100 -> Plus
2R 19438407..19438531 487..611 100 -> Plus
2R 19438590..19438727 612..749 99 -> Plus
2R 19439298..19439368 1201..1271 100 -> Plus
2R 19440444..19441167 1714..2437 100 -> Plus
2R 19441226..19441899 2438..3114 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:59:41 Download gff for RE49559.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15324989..15325086 1..97 98 -> Plus
arm_2R 15325460..15325848 98..486 100 -> Plus
arm_2R 15325912..15326036 487..611 100 -> Plus
arm_2R 15326095..15326232 612..749 99 -> Plus
arm_2R 15326290..15326740 750..1200 100 -> Plus
arm_2R 15326803..15326873 1201..1271 100 -> Plus
arm_2R 15326931..15327097 1272..1438 100 -> Plus
arm_2R 15327158..15327296 1439..1577 100 -> Plus
arm_2R 15327759..15327894 1578..1713 100 -> Plus
arm_2R 15327949..15328672 1714..2437 100 -> Plus
arm_2R 15328731..15329404 2438..3114 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:51:39 Download gff for RE49559.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19438683..19438780 1..97 98 -> Plus
2R 19439154..19439542 98..486 100 -> Plus
2R 19439606..19439730 487..611 100 -> Plus
2R 19439789..19439926 612..749 99 -> Plus
2R 19439984..19440434 750..1200 100 -> Plus
2R 19440497..19440567 1201..1271 100 -> Plus
2R 19440625..19440791 1272..1438 100 -> Plus
2R 19440852..19440990 1439..1577 100 -> Plus
2R 19441453..19441588 1578..1713 100 -> Plus
2R 19441643..19442366 1714..2437 100 -> Plus
2R 19442425..19443098 2438..3114 99   Plus

RE49559.pep Sequence

Translation from 114 to 3002

> RE49559.pep
MSDSEVSNMSDSGSEDGSISNKSQRSARSKSRSRSRSGSRGSRSVSRSRS
RSQSGHSRSGSESPQRRDNRGKSDESGEEEEEPPGEDIDSEEYDEEENDD
HPRKKKKKERFGGFIIDEAEVDDEVDEDDEWEEGANEIGIVGNEIDELGP
TARDIEIRRRGTNLWDTQKEDEIEEYLRKKYADESIAKRHFGDGGEEMSD
EITQQTLLPGIKDPNLWMVKCRIGEEKATALLLMRKYLTYLNTDDPLQIK
SIIAPEGVKGYIYLEAYKQTHVKTCIDNVGNLRMGKWKQEMVPIKEMTDV
LKVVKEQVGLKVKQWVRLKRGLYKDDIAQVDYVDLAQNQVHLKLLPRIDY
TRMRGALRTTATESDDSKRKKKRRPAAKPFDPEAVRAIGGEVHSDGDFLL
FEGNRYSRKGFLYKNFTMSAILSDGVKPTLAELERFEESPEEVNLEIMGT
VKDDPTMAHSFSMGDNVEVCVGDLENLQAKIVAIDGTMNGKCIECKPTAL
HKRKENRHTVALDADQNQIRRRDVVKVMEGPHAGRSGEIKHLYRSLAFLH
CRMYTENGGIFVCKTRHLQLAGGSKTTVSNAGIVGGLGFMSPRIQSPMHP
SGGRGARGGARGGRGGFRVTRDREILGKTIKISGGPYKGAVGIVKDATES
TARVELHTSCQTISVDRNHIAIVGVTGKEGSVSTYGRTPARTPGYGAQTP
SYTAAGSKTPLVGSQTPNWDTDTRTPYGTMTPSHDGSMTPRHGAWDPTAN
TTPARNNDFDYSLEEPSPSPGYNPSTPGYQMTSQFAPQTPGTLYGSDRSY
SPFNPSPSPAPSPYPVGYMNTPSPSTYSPNTPGGIPQSPYNPQTPGASLD
SSMGDWCTTDIEVRIHTHDDTDLVGQTGIIRTVSNGVCSVFLRQEDRSVS
IVSEHLAPVLPCNGDEFKIIYGDDRESVGRVLSKDGDVFVCRINEEIKLL
PINFLCKMKSID*

RE49559.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:30:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12341-PA 1081 GF12341-PA 577..1081 461..962 2267 90.5 Plus
Dana\GF12341-PA 1081 GF12341-PA 1..575 1..582 2003 80.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:30:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21970-PA 1078 GG21970-PA 574..1078 461..962 2277 90.9 Plus
Dere\GG21970-PA 1078 GG21970-PA 1..532 1..539 2036 89.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:30:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20202-PA 1082 GH20202-PA 578..1082 461..962 2219 88.9 Plus
Dgri\GH20202-PA 1082 GH20202-PA 1..536 1..539 2009 81.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:46:23
Subject Length Description Subject Range Query Range Score Percent Strand
Spt5-PA 1078 CG7626-PA 536..1078 426..962 2563 90.1 Plus
Spt5-PA 1078 CG7626-PA 1..533 1..539 2527 91.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:30:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20728-PA 1087 GI20728-PA 583..1087 461..962 2211 88.5 Plus
Dmoj\GI20728-PA 1087 GI20728-PA 1..581 1..582 1992 74.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:30:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10931-PA 1080 GL10931-PA 575..1080 461..962 2244 88.6 Plus
Dper\GL10931-PA 1080 GL10931-PA 1..533 1..539 2030 86.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:30:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20489-PA 1080 GA20489-PA 575..1080 461..962 2244 88.6 Plus
Dpse\GA20489-PA 1080 GA20489-PA 1..533 1..539 2030 86.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:30:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21959-PA 1078 GM21959-PA 575..1078 461..962 2370 94.7 Plus
Dsec\GM21959-PA 1078 GM21959-PA 1..533 1..539 2083 91.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:30:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11454-PA 881 GD11454-PA 378..881 461..962 2362 94.5 Plus
Dsim\GD11454-PA 881 GD11454-PA 1..336 198..539 1553 86.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:30:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20465-PA 1085 GJ20465-PA 581..1085 461..962 2219 88.9 Plus
Dvir\GJ20465-PA 1085 GJ20465-PA 1..579 1..582 2022 75.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:30:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15869-PA 1082 GK15869-PA 578..1082 461..962 2257 89.7 Plus
Dwil\GK15869-PA 1082 GK15869-PA 1..576 1..582 2020 78 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:30:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12049-PA 1079 GE12049-PA 575..1079 461..962 2278 90.9 Plus
Dyak\GE12049-PA 1079 GE12049-PA 1..533 1..539 2055 90.9 Plus

RE49559.hyp Sequence

Translation from 114 to 3002

> RE49559.hyp
MSDSEVSNMSDSGSEDGSISNKSQRSARSKSRSRSRSGSRGSRSVSRSRS
RSQSGHSRSGSESPQRRDNRGKSDESGEEEEEPPGEDIDSEEYDEEENDD
HPRKKKKKERFGGFIIDEAEVDDEVDEDDEWEEGANEIGIVGNEIDELGP
TARDIEIRRRGTNLWDTQKEDEIEEYLRKKYADESIAKRHFGDGGEEMSD
EITQQTLLPGIKDPNLWMVKCRIGEEKATALLLMRKYLTYLNTDDPLQIK
SIIAPEGVKGYIYLEAYKQTHVKTCIDNVGNLRMGKWKQEMVPIKEMTDV
LKVVKEQVGLKVKQWVRLKRGLYKDDIAQVDYVDLAQNQVHLKLLPRIDY
TRMRGALRTTATESDDSKRKKKRRPAAKPFDPEAVRAIGGEVHSDGDFLL
FEGNRYSRKGFLYKNFTMSAILSDGVKPTLAELERFEESPEEVNLEIMGT
VKDDPTMAHSFSMGDNVEVCVGDLENLQAKIVAIDGTMNGKCIECKPTAL
HKRKENRHTVALDADQNQIRRRDVVKVMEGPHAGRSGEIKHLYRSLAFLH
CRMYTENGGIFVCKTRHLQLAGGSKTTVSNAGIVGGLGFMSPRIQSPMHP
SGGRGARGGARGGRGGFRVTRDREILGKTIKISGGPYKGAVGIVKDATES
TARVELHTSCQTISVDRNHIAIVGVTGKEGSVSTYGRTPARTPGYGAQTP
SYTAAGSKTPLVGSQTPNWDTDTRTPYGTMTPSHDGSMTPRHGAWDPTAN
TTPARNNDFDYSLEEPSPSPGYNPSTPGYQMTSQFAPQTPGTLYGSDRSY
SPFNPSPSPAPSPYPVGYMNTPSPSTYSPNTPGGIPQSPYNPQTPGASLD
SSMGDWCTTDIEVRIHTHDDTDLVGQTGIIRTVSNGVCSVFLRQEDRSVS
IVSEHLAPVLPCNGDEFKIIYGDDRESVGRVLSKDGDVFVCRINEEIKLL
PINFLCKMKSID*

RE49559.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:32:16
Subject Length Description Subject Range Query Range Score Percent Strand
Spt5-PA 1078 CG7626-PA 536..1078 426..962 2563 90.1 Plus
Spt5-PA 1078 CG7626-PA 1..533 1..539 2527 91.9 Plus