BDGP Sequence Production Resources |
Search the DGRC for RE49668
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 496 |
Well: | 68 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG31323-RA |
Protein status: | RE49668.pep: gold |
Preliminary Size: | 924 |
Sequenced Size: | 3498 |
Gene | Date | Evidence |
---|---|---|
CG31323 | 2001-12-17 | Blastp of sequenced clone |
CG14558 | 2002-01-01 | Sim4 clustering to Release 2 |
CG31323 | 2008-04-29 | Release 5.5 accounting |
CG31323 | 2008-08-15 | Release 5.9 accounting |
CG31323 | 2008-12-18 | 5.12 accounting |
3498 bp (3498 high quality bases) assembled on 2001-12-17
GenBank Submission: AY071413
> RE49668.complete AGCTCTCATGCGGCTTTCATCCGAACCGCACCGTATCAGTTCGCAACGGA ATTTTGCCAAAAAGATACTTTTGAAACTACGTAACGAACTTCAAAGCGAC ACGTGGGTGTGAAAAAAGGCTATAAAAAAAAAACAGCTTCAAATTGCAGT GTTCGTTAAATTATAAGAAATCAGGCGAAATATCTAAATGATGGCGAAGT GAAATGAATTCCGAGGAATGTCCGCAATTGGTCAACCTGTGAGTCCAGCG AATCCCGTGTGAGTGCTGTGCGTGCCCAGACGATGGCGGTGGGCAGTTCA ATTATGGAGACCGTCGCTATTTTGGCCCTGCTGCTTGGCCTGTTCATTCG AAGTGGCTACTGCATAGACTGTTTCAAATGCGTGTCATACAATGGTGCTA ACAAGGCCTGCGACGATCCCTTTCACAACAACTACTCAACGGCCATTTTG GAGTCGCCCTGCATGGGCGGCCGGAAGGGGCGTGACGGCCTGTTTCCGGC CACCGCTTGCATCAAGATCGCCGGCTATTACGATGGAACTGGCGAGACGA TAACGGTGAGAGGTTGCGCCCTGGACAGCGGCACCCTGACCACCGACACA GAGATTATAAGAATGTCGCATTGCGGAAAGTTCTACTACGATGACAAGTA CGTGCACGGGTGCTTGCAGAGCTGCAGCGATGCGGATGCCTGCAACTCGG CCAGGAGGCAGGGCGCAAGTCCCGCAGACCTGGAGTCACTGATGAGGCAC CTGCTCAGTCTGGTCGTGTTCCTATTGGCTGCCAGCAGGTAGCATAGTGG ATATCTGTAGGTACCGCATCCGGAGCAGAAGAGGCAGGCGGAAATATGGC TGCAAGGGAAGTAAGGCAGCCGGGAAGGCATTCAAGTCGTCTTGGATGCA CGTGGAAATCCTTTTCTTTTCCTTCGAATCTCTCTGTGTCTAGGATCGCA ATCGCACCCAAATGTAAACGCACTCGAGCTGCTGCAGCAAGGACACGCTC GGAAACACACTCTCTCTTACACACAATAACATTATGGAATTCATCAAGCA ATTATGTGATTTTTAAGCGAATACTTAACAACTATCAAACAATAATTGAT GAGCGCGAAAGGAAACTATTTAGATGCTAAGCATTCGAGTGGCGAAAATC AAAGAAAAACACTGCAAACCAAATTCAAATTCTAATTGCAATTATTTTTA GCTCCTAAGAAGGAATCTAGACTTTAAACGCTGTCGCTTAGTGAAAGGCA GGAATGGTTTACGATTTATATACGATGTGTTTTACCTTGGCATAAGTAAG CATTTTTCACCTCTCTAGATGAGTATTGTACATATACAAAAACAATTTAT CTATTTGTTAAACGAGTGCTGAATTTTGGGCAGATTATAAATAGTTGTGT AAATGGATTAGTGAGTAAAATTAGCAACGAAAACTGCGAGCTACAAAGAG GGAGGAAAATTACTTTTTTTTGGGAGATTGATGTAATAACGTCATCTTTA TTTAAACAGTTTTGTTTTACATTATCAAACCACTATTAGATTACTTGGTT TACTCGGAACTGTGTGAACTATTTACTATCAAATATTACTTCTATTAAGT CCTAAATCAAGCCATAAATGCCGGTCATAAATGACACAATTCGTTGCTAT ATAGACTTCTGAATTTAGACAGCCAACTACTAACACTTACCGCCTTACCA GTCTGGTGCGGTTGATTCACCGGAAGATTGGTTATCATGTCCGGATAACC TGATAGGGTATCGGTTACCTAGGTGTTGCCTAGCCGCCGCCAAAAATAAC TATCGCAATTGCTTAGTACATTCAAGCAGCTCAATCGAAATGGACGGTAA GCACTGGCGCATTCCCCTTTTCCGTTCGGATCCTCCAATTTAGCGGGATA ATTTCGCTGACTTGCAGGTCACAGCTGGCTTCACTTCAGCAACGGAGCAA TCCCCCAGGCAGCCGTTGTGGCTGGTCACGATTCCGATGGCGACACCATC TTCATTGGCCGCGCCTTCTACTGCAACGACATGCTGCCGGCCAAGATTAT CCCCAACAAGGGCAAGGCCTACGTGGCGTATGCCAACCAGGAGGTGGAGC TGGAGAACTACGAGGTACTCAGCGGCTTCAACTACGAGTGGCTGCCGGCC GAGAACGGAGAGGTGCCTCCCGGCGCCGTCAAGGTCGGCCAGAATGTCGA CGGAGAGACCTTGTACGCCGGAAGGGGCTACCATGCCGGCAGTTTGACCG TGGGCAAGGTGCATCCGTCCCACGGCTGCCTGTACATTCCCTACGATTCC GAGGAGGTTAAGATATTCGCCTACGAGGTTCTGTCCCGTCGCTTGGAGGC GAGATAGGTGATCCATTTTCAGTTATTGCCTGTTAATCACAAATAAATTC GACACTTTTTGTAGACGCTCGTGTGTTGTTATCTCCATTTGGTGATCATA AAACTTCCTTATCGTGCAAAGATTAATTTCAAACATAACTAAAAATAATA GAGTTGATAGCTTGAGAAATACGTGGTTATTATAATGTATTGTAGATGGT ATTGGTTTTTCAGACTTCAACTTGTGCTCGCAGTTTTCGTCCATACCCCT TTTATGCAGGAAAAAGTTATAAGTTAACAAAACCAAATATGACCACAGTG AAGCCACTAATTAACGTCTAAGTTGAAAACTCTCTTAATTACGCGATGCC TAAATACTTGATTGTAAAATCGAGCTAAATTTTCATATGGATATGGCGAA CCAATAGGACCAAACTAAATAAAACGAATACTATAACGAATGGGTCGGAG TCCACGGCAATGACATTCGATATGCATCGAATTCTAGTTTAAATTGTTTA TGGTTCGCATGTCGGTACTTCATTTTTCGGACTAAGCGAGCTTGCAATGG TTTCCGCAAATAAAAATCAACAACAACTATGTATAAACAAGTGAAGAAGT TTTGATAGAACGCAACGGTTTTTGATCGGTAGCAGACAGGCAACACATCA AAATCAGGCAATTCGCATTTTCTCTCTGCTGAAATCGCTTGCTTGCCACG CAACTAAACGCAAACTAATCGAAAGCAAACACAATACGCACTTATTGGCT ATAACGGCTCCCCGGCTAAGGGCCATTGAATTCTTCAACTCTCTAACACA CAATGAACGACCAAGCAAAGTTTGTAAAAATAACACAAGAGTACATTAAA CGTTTCATGGCAAGGCGAATGCCAAACATTTTTGAATGCAAATGTATCTA GAATTTAAGGAGATCTTTATACATATACAATTGAGGCGGCAGAGCGATGG ATTAACGATAATTAGATAAACTAGATAACGACGCTACTTGAACTAATCAA ATTGAATTGAAAATCGAAATTGAATCTGTTTACCCTGCAATTGAATGTGT GCGTACAACTTTTTCTAGTGCAACATTTTGAAGCATTACGAACTAAACTA TCAGCATTTCTGAATAAAAAACTGCATACATATATTGAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31323-RA | 3488 | CG31323-RA | 5..3488 | 4..3487 | 17405 | 99.9 | Plus |
CG31086-RA | 1054 | CG31086-RA | 416..1054 | 1917..2555 | 3195 | 100 | Plus |
CG31086-RA | 1054 | CG31086-RA | 1..418 | 1431..1848 | 2090 | 100 | Plus |
CG6073-RA | 1608 | CG6073-RA | 1269..1608 | 3490..3151 | 1700 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 22007513..22010343 | 648..3487 | 13790 | 99.1 | Plus |
chrX | 22417052 | chrX | 13452746..13453118 | 1962..2334 | 1055 | 85.5 | Plus |
chr3R | 27901430 | chr3R | 22007089..22007266 | 355..532 | 890 | 100 | Plus |
chr3R | 27901430 | chr3R | 21993889..21994069 | 4..182 | 825 | 98.3 | Plus |
chr3R | 27901430 | chr3R | 22006844..22007010 | 190..356 | 805 | 98.8 | Plus |
chr3R | 27901430 | chr3R | 22007334..22007452 | 532..650 | 595 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 26184468..26187310 | 648..3490 | 14200 | 100 | Plus |
X | 23542271 | X | 13562010..13562382 | 1962..2334 | 1055 | 85.5 | Plus |
3R | 32079331 | 3R | 26170852..26171038 | 4..190 | 935 | 100 | Plus |
3R | 32079331 | 3R | 26184044..26184221 | 355..532 | 890 | 100 | Plus |
3R | 32079331 | 3R | 26183799..26183965 | 190..356 | 835 | 100 | Plus |
3R | 32079331 | 3R | 26184289..26184407 | 532..650 | 595 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 25925299..25928141 | 648..3490 | 14200 | 99.9 | Plus |
X | 23527363 | X | 13570108..13570480 | 1962..2334 | 1055 | 85.5 | Plus |
3R | 31820162 | 3R | 25911683..25911869 | 4..190 | 935 | 100 | Plus |
3R | 31820162 | 3R | 25924875..25925052 | 355..532 | 890 | 100 | Plus |
3R | 31820162 | 3R | 25924630..25924796 | 190..356 | 835 | 100 | Plus |
3R | 31820162 | 3R | 25925120..25925238 | 532..650 | 595 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 21993886..21994080 | 1..190 | 96 | -> | Plus |
chr3R | 22006845..22007009 | 191..355 | 98 | -> | Plus |
chr3R | 22007090..22007266 | 356..532 | 100 | -> | Plus |
chr3R | 22007335..22007449 | 533..647 | 100 | -> | Plus |
chr3R | 22007513..22010343 | 648..3487 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31323-RA | 1..510 | 283..792 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31323-RA | 1..510 | 283..792 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31323-RA | 1..510 | 283..792 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31323-RA | 1..510 | 283..792 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31323-RA | 1..510 | 283..792 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31323-RA | 1..1527 | 1..1527 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31323-RA | 1..3487 | 1..3487 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31323-RA | 3..3489 | 1..3487 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31323-RA | 1..1527 | 1..1527 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31323-RA | 3..3489 | 1..3487 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26170849..26171038 | 1..190 | 99 | -> | Plus |
3R | 26183800..26183964 | 191..355 | 100 | -> | Plus |
3R | 26184045..26184221 | 356..532 | 100 | -> | Plus |
3R | 26184290..26184404 | 533..647 | 100 | -> | Plus |
3R | 26184468..26187307 | 648..3487 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26170849..26171038 | 1..190 | 99 | -> | Plus |
3R | 26183800..26183964 | 191..355 | 100 | -> | Plus |
3R | 26184045..26184221 | 356..532 | 100 | -> | Plus |
3R | 26184290..26184404 | 533..647 | 100 | -> | Plus |
3R | 26184468..26187307 | 648..3487 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26170849..26171038 | 1..190 | 99 | -> | Plus |
3R | 26183800..26183964 | 191..355 | 100 | -> | Plus |
3R | 26184045..26184221 | 356..532 | 100 | -> | Plus |
3R | 26184290..26184404 | 533..647 | 100 | -> | Plus |
3R | 26184468..26187307 | 648..3487 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 21996571..21996760 | 1..190 | 99 | -> | Plus |
arm_3R | 22009522..22009686 | 191..355 | 100 | -> | Plus |
arm_3R | 22009767..22009943 | 356..532 | 100 | -> | Plus |
arm_3R | 22010012..22010126 | 533..647 | 100 | -> | Plus |
arm_3R | 22010190..22013029 | 648..3487 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25925299..25928138 | 648..3487 | 99 | Plus | |
3R | 25911680..25911869 | 1..190 | 99 | -> | Plus |
3R | 25924631..25924795 | 191..355 | 100 | -> | Plus |
3R | 25924876..25925052 | 356..532 | 100 | -> | Plus |
3R | 25925121..25925235 | 533..647 | 100 | -> | Plus |
Translation from 282 to 791
> RE49668.pep MAVGSSIMETVAILALLLGLFIRSGYCIDCFKCVSYNGANKACDDPFHNN YSTAILESPCMGGRKGRDGLFPATACIKIAGYYDGTGETITVRGCALDSG TLTTDTEIIRMSHCGKFYYDDKYVHGCLQSCSDADACNSARRQGASPADL ESLMRHLLSLVVFLLAASR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16763-PA | 169 | GF16763-PA | 1..156 | 1..156 | 777 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11467-PA | 169 | GG11467-PA | 1..169 | 1..169 | 873 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19467-PA | 160 | GH19467-PA | 1..145 | 1..151 | 656 | 83.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31323-PB | 169 | CG31323-PB | 1..169 | 1..169 | 898 | 100 | Plus |
CG31323-PA | 169 | CG31323-PA | 1..169 | 1..169 | 898 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24702-PA | 161 | GI24702-PA | 1..146 | 1..151 | 613 | 80.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21833-PA | 169 | GL21833-PA | 1..169 | 1..169 | 694 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16181-PA | 169 | GA16181-PA | 1..169 | 1..169 | 694 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10312-PA | 162 | GM10312-PA | 1..162 | 8..169 | 854 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21273-PA | 164 | GD21273-PA | 1..164 | 1..164 | 866 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23920-PA | 160 | GJ23920-PA | 1..147 | 1..153 | 640 | 84.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13295-PA | 173 | GK13295-PA | 8..159 | 6..156 | 649 | 82.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23658-PA | 169 | GE23658-PA | 1..169 | 1..169 | 878 | 98.8 | Plus |
Translation from 282 to 791
> RE49668.hyp MAVGSSIMETVAILALLLGLFIRSGYCIDCFKCVSYNGANKACDDPFHNN YSTAILESPCMGGRKGRDGLFPATACIKIAGYYDGTGETITVRGCALDSG TLTTDTEIIRMSHCGKFYYDDKYVHGCLQSCSDADACNSARRQGASPADL ESLMRHLLSLVVFLLAASR*