Clone RE50839 Report

Search the DGRC for RE50839

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:508
Well:39
Vector:pFlc-1
Associated Gene/TranscriptSpx-RA
Protein status:RE50839.pep: gold
Preliminary Size:1091
Sequenced Size:1647

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3780 2002-01-01 Sim4 clustering to Release 2
CG3780 2003-01-01 Sim4 clustering to Release 3
Spx 2008-04-29 Release 5.5 accounting
Spx 2008-08-15 Release 5.9 accounting
Spx 2008-12-18 5.12 accounting

Clone Sequence Records

RE50839.complete Sequence

1647 bp (1647 high quality bases) assembled on 2006-06-05

GenBank Submission: BT023489

> RE50839.complete
GGTGTGTTGCGAGCATTTTTGCATGTTGAAAACGCCGAAAATTAGTTTTT
GGTTTTGTTTATAAAAATAGCTCCGAAATGGCGGCAGGTCCAATTGCTGA
ACGCAACCAAGATGCCACCATCTATGCCGGCGGTCTTGACGACAAGGTGT
CGGAAACGCTGCTTTGGGAGCTGTTTGTCCAGGCAGGACCAGTGGTGAAC
GTACACATGCCCAAGGATCGTGTCACCCAAATGCACCAGGGCTATGGATT
CGTCGAGTTCCTCAGCGAGGAAGACGCCGACTATGGAATAAAGATCATGA
ACATGATCAAGCTTTACGGCAAGCCCATTCGCGTGAACAAGGCGTCGGCG
CATCAGAAGAACCTGGACGTCGGCGCCAACATCTTCATTGGCAACCTAGA
CGTGGAAGTGGACGAGAAGCTGCTGTACGATACGTTCTCCGCCTTCGGCG
TTATACTGCAGACGCCGAAGATCATGCGAGACCCAGAGACGGGCAAGTCT
AAGAGCTTTGCGTTCATCAACTTTGCCAGCTTCGAGGCCAGCGATGCGGC
CATGGACGCCATGAACGGCCAGTACCTGTGCAACCGTCCCATTTCCGTGT
CCTATGCCTTCAAGAAGGATCACAAGGGCGAGCGTCACGGTTCGGCTGCG
GAGCGCCTGTTGGCCGCCCAGAATCCATCGACCCATGCAGACCGGCCGCA
TCAATTGTTCGCCGATGCACCGGTGCAAACCATGATGCCCCAGATGCCGG
GCCAGATCCCGGCCCAGATGCCGGGCCAGATGATGCCGCCACCCATGATG
GCGCCGCCGCCGCCGGTGGTGCCCGTTTCGAATAACAATATGGGCATGCT
AGCACCGCCGCCGCCCGTTCCCCAGCCTGCACCGTTCCCAGCTACGATAC
CGCCGCCTCCGTTGCCACCGATGACCGGCGGACAGCCGCCGCTGCCGCCA
GCAATGGGCATTCCGCCGCCGCCTCGCATGATGCAACCAAATGCATGGGC
ACCGCCCGGCATGCCTGCTCCTCCGCCCAGACCACCGCCCACCAACTGGC
GTCCGCCGCCCGTGCCCTTCCCACCCACGCCCTACGCACGGCCCTATCAA
CCCGACGGCTACCAGTACTAAGTCTAGCGTGTAGTGTATACCAATTTGGA
CGAGACGAGAAATAAACATCAATAGGATTCATCAATGAAGCCTGCTCTGG
GATATGTTAAGATTTCCATTCTTCTTTCTAATATGCATTTAACAACCGGG
AAACCACTGGGAGACATTTAGATCATCATTGTATTTCCATTTAGTAGTCG
CAATACAATCTTCGAATTCTTACAAGACGAAATTAAATAACTTTGAATAG
AATTTTGAAATGAACGAAATGATTTGATATAAATTGACTCTCGATTCTTG
ATTTTTTTTTAAACGGAACTATTTTCAATAAACATAAAACGTTTACATTA
ACAAGTCTGTAAGTTTAATTTGAATGGAACATACGAAGAAAGCGATAATT
TTTTTTTGTAATTTAACTAAGTATTTTTAAAGGGCTCCCTCTAATTTAAT
GTCCAATCCTTTGAAGTTATGTATAGAAACTAGCTTGTAGTTCAAAATAA
ACTGAGGAATGATTTTCCATTTATTGAAATGAAAAAAAAAAAAAAAA

RE50839.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:14:09
Subject Length Description Subject Range Query Range Score Percent Strand
Spx-RA 1699 Spx-RA 41..1672 3..1634 8160 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:58:11
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 6148344..6149780 195..1631 7185 100 Plus
chrX 22417052 chrX 6148020..6148128 3..111 545 100 Plus
chrX 22417052 chrX 6148201..6148286 110..195 430 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:00:41 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:58:09
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6256160..6257599 195..1634 7200 100 Plus
X 23542271 X 6255836..6255944 3..111 545 100 Plus
X 23542271 X 6256017..6256102 110..195 430 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:07:51
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 6264258..6265697 195..1634 7200 100 Plus
X 23527363 X 6263934..6264042 3..111 545 100 Plus
X 23527363 X 6264115..6264200 110..195 430 100 Plus
Blast to na_te.dros performed on 2019-03-16 18:58:10 has no hits.

RE50839.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:58:52 Download gff for RE50839.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 6148017..6148128 1..111 99 -> Plus
chrX 6148203..6148286 112..195 100 -> Plus
chrX 6148345..6149780 196..1631 97   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:20:59 Download gff for RE50839.complete
Subject Subject Range Query Range Percent Splice Strand
Spx-RA 1..1044 78..1121 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:23:27 Download gff for RE50839.complete
Subject Subject Range Query Range Percent Splice Strand
Spx-RA 1..1044 78..1121 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:20:50 Download gff for RE50839.complete
Subject Subject Range Query Range Percent Splice Strand
Spx-RA 1..1044 78..1121 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:42:08 Download gff for RE50839.complete
Subject Subject Range Query Range Percent Splice Strand
Spx-RA 1..1044 78..1121 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:57:02 Download gff for RE50839.complete
Subject Subject Range Query Range Percent Splice Strand
Spx-RA 1..1044 78..1121 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:51:40 Download gff for RE50839.complete
Subject Subject Range Query Range Percent Splice Strand
Spx-RA 1..1455 1..1454 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:23:27 Download gff for RE50839.complete
Subject Subject Range Query Range Percent Splice Strand
Spx-RA 26..1657 1..1631 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:20:50 Download gff for RE50839.complete
Subject Subject Range Query Range Percent Splice Strand
Spx-RA 12..1643 1..1631 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:42:09 Download gff for RE50839.complete
Subject Subject Range Query Range Percent Splice Strand
Spx-RA 1..1455 1..1454 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:57:02 Download gff for RE50839.complete
Subject Subject Range Query Range Percent Splice Strand
Spx-RA 12..1643 1..1631 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:58:52 Download gff for RE50839.complete
Subject Subject Range Query Range Percent Splice Strand
X 6255833..6255944 1..111 99 -> Plus
X 6256019..6256102 112..195 100 -> Plus
X 6256161..6257596 196..1631 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:58:52 Download gff for RE50839.complete
Subject Subject Range Query Range Percent Splice Strand
X 6255833..6255944 1..111 99 -> Plus
X 6256019..6256102 112..195 100 -> Plus
X 6256161..6257596 196..1631 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:58:52 Download gff for RE50839.complete
Subject Subject Range Query Range Percent Splice Strand
X 6255833..6255944 1..111 99 -> Plus
X 6256019..6256102 112..195 100 -> Plus
X 6256161..6257596 196..1631 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:20:50 Download gff for RE50839.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6149866..6149977 1..111 99 -> Plus
arm_X 6150052..6150135 112..195 100 -> Plus
arm_X 6150194..6151629 196..1631 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:51:23 Download gff for RE50839.complete
Subject Subject Range Query Range Percent Splice Strand
X 6263931..6264042 1..111 99 -> Plus
X 6264117..6264200 112..195 100 -> Plus
X 6264259..6265694 196..1631 100   Plus

RE50839.pep Sequence

Translation from 77 to 1120

> RE50839.pep
MAAGPIAERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVT
QMHQGYGFVEFLSEEDADYGIKIMNMIKLYGKPIRVNKASAHQKNLDVGA
NIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAFINFA
SFEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGERHGSAAERLLAAQNP
STHADRPHQLFADAPVQTMMPQMPGQIPAQMPGQMMPPPMMAPPPPVVPV
SNNNMGMLAPPPPVPQPAPFPATIPPPPLPPMTGGQPPLPPAMGIPPPPR
MMQPNAWAPPGMPAPPPRPPPTNWRPPPVPFPPTPYARPYQPDGYQY*

RE50839.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:27:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20385-PA 341 GF20385-PA 1..341 1..347 1301 94.2 Plus
Dana\GF12652-PA 639 GF12652-PA 2..162 13..174 270 36 Plus
Dana\GF17967-PA 471 GF17967-PA 2..174 8..180 243 32.8 Plus
Dana\GF12652-PA 639 GF12652-PA 82..283 5..201 194 27.8 Plus
Dana\GF14992-PA 660 GF14992-PA 109..267 24..177 188 34 Plus
Dana\GF21012-PA 757 GF21012-PA 124..286 29..198 180 29.7 Plus
Dana\GF12652-PA 639 GF12652-PA 185..368 15..183 173 26.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:27:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19577-PA 339 GG19577-PA 1..339 1..347 1707 95.7 Plus
Dere\GG21846-PA 635 GG21846-PA 2..162 13..174 279 38.4 Plus
Dere\GG12380-PA 464 GG12380-PA 2..174 8..180 249 33.3 Plus
Dere\GG21846-PA 635 GG21846-PA 82..283 5..201 189 27.8 Plus
Dere\GG24901-PA 446 GG24901-PA 123..281 24..177 187 34 Plus
Dere\GG12847-PA 513 GG12847-PA 117..249 29..163 174 28.9 Plus
Dere\GG21846-PA 635 GG21846-PA 185..368 15..183 157 26.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:27:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17589-PA 340 GH17589-PA 1..340 1..347 1236 83.6 Plus
Dgri\GH21052-PA 645 GH21052-PA 2..162 13..174 278 37.8 Plus
Dgri\GH19101-PA 476 GH19101-PA 2..174 8..180 244 32.8 Plus
Dgri\GH13638-PA 726 GH13638-PA 124..277 24..177 201 35 Plus
Dgri\GH24172-PA 365 GH24172-PA 113..265 9..163 171 27.7 Plus
Dgri\GH21052-PA 645 GH21052-PA 185..368 15..183 169 27.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:05:38
Subject Length Description Subject Range Query Range Score Percent Strand
Spx-PA 347 CG3780-PA 1..347 1..347 1896 100 Plus
pAbp-PA 634 CG5119-PA 2..180 13..192 269 34.6 Plus
pAbp-PB 634 CG5119-PB 2..180 13..192 269 34.6 Plus
pAbp-PC 634 CG5119-PC 2..180 13..192 269 34.6 Plus
Rb97D-PE 434 CG6354-PE 25..392 6..346 268 28.8 Plus
Rb97D-PD 434 CG6354-PD 25..392 6..346 268 28.8 Plus
Rb97D-PG 465 CG6354-PG 25..392 6..346 268 28.8 Plus
Rb97D-PC 465 CG6354-PC 25..392 6..346 268 28.8 Plus
Rb97D-PA 465 CG6354-PA 25..392 6..346 268 28.8 Plus
Rb97D-PI 471 CG6354-PI 25..392 6..346 268 28.8 Plus
Rb97D-PF 471 CG6354-PF 25..392 6..346 268 28.8 Plus
Rb97D-PB 471 CG6354-PB 25..392 6..346 268 28.8 Plus
Rb97D-PH 471 CG6354-PH 25..392 6..346 268 28.8 Plus
Rox8-PC 464 CG5422-PC 2..174 8..180 240 33.3 Plus
Rox8-PB 464 CG5422-PB 2..174 8..180 240 33.3 Plus
Rox8-PH 470 CG5422-PH 2..174 8..180 240 33.3 Plus
Rox8-PG 470 CG5422-PG 2..174 8..180 240 33.3 Plus
Rox8-PE 470 CG5422-PE 2..174 8..180 240 33.3 Plus
Rox8-PD 470 CG5422-PD 2..174 8..180 240 33.3 Plus
BOD1-PC 1109 CG5514-PC 334..490 197..333 212 38.2 Plus
BOD1-PA 1109 CG5514-PA 334..490 197..333 212 38.2 Plus
BOD1-PD 1150 CG5514-PD 334..490 197..333 212 38.2 Plus
BOD1-PB 1150 CG5514-PB 334..490 197..333 212 38.2 Plus
BOD1-PE 1151 CG5514-PE 334..490 197..333 212 38.2 Plus
Rbp9-PH 439 CG3151-PH 117..274 20..177 202 33.1 Plus
Rbp9-PG 439 CG3151-PG 117..274 20..177 202 33.1 Plus
Rbp9-PF 439 CG3151-PF 117..274 20..177 202 33.1 Plus
Rbp9-PE 439 CG3151-PE 117..274 20..177 202 33.1 Plus
Rbp9-PJ 684 CG3151-PJ 117..274 20..177 202 33.1 Plus
BOD1-PC 1109 CG5514-PC 392..500 211..330 199 38.3 Plus
BOD1-PA 1109 CG5514-PA 392..500 211..330 199 38.3 Plus
BOD1-PD 1150 CG5514-PD 392..500 211..330 199 38.3 Plus
BOD1-PB 1150 CG5514-PB 392..500 211..330 199 38.3 Plus
BOD1-PE 1151 CG5514-PE 392..500 211..330 199 38.3 Plus
CG13722-PB 708 CG13722-PB 489..637 221..347 197 37.6 Plus
CG13722-PB 708 CG13722-PB 520..680 200..347 197 36.9 Plus
CG15021-PA 420 CG15021-PA 59..172 221..342 194 41.3 Plus
hfp-PJ 545 CG12085-PJ 40..348 15..285 191 24.8 Plus
hfp-PI 545 CG12085-PI 40..348 15..285 191 24.8 Plus
hfp-PH 545 CG12085-PH 40..348 15..285 191 24.8 Plus
hfp-PG 545 CG12085-PG 40..348 15..285 191 24.8 Plus
hfp-PF 545 CG12085-PF 40..348 15..285 191 24.8 Plus
hfp-PE 545 CG12085-PE 40..348 15..285 191 24.8 Plus
hfp-PB 545 CG12085-PB 40..348 15..285 191 24.8 Plus
hfp-PD 545 CG12085-PD 40..348 15..285 191 24.8 Plus
hfp-PC 545 CG12085-PC 40..348 15..285 191 24.8 Plus
hfp-PA 637 CG12085-PA 132..440 15..285 191 24.8 Plus
Bap111-PA 749 CG7055-PA 474..601 224..345 190 37.1 Plus
ena-PG 664 CG15112-PG 342..456 200..321 189 41.3 Plus
ena-PE 684 CG15112-PE 362..476 200..321 189 41.3 Plus
ena-PC 684 CG15112-PC 362..476 200..321 189 41.3 Plus
ena-PA 684 CG15112-PA 362..476 200..321 189 41.3 Plus
ena-PD 687 CG15112-PD 365..479 200..321 189 41.3 Plus
ena-PB 834 CG15112-PB 511..625 200..321 189 41.3 Plus
ena-PF 980 CG15112-PF 658..772 200..321 189 41.3 Plus
CG15021-PA 420 CG15021-PA 181..330 199..342 187 35.5 Plus
CG13722-PB 708 CG13722-PB 231..372 221..347 186 36.6 Plus
CG13722-PB 708 CG13722-PB 248..409 200..342 186 33.9 Plus
CG15021-PA 420 CG15021-PA 84..247 200..344 186 35.1 Plus
Rbp9-PK 444 CG3151-PK 117..279 20..177 186 32.1 Plus
Rbp9-PI 444 CG3151-PI 117..279 20..177 186 32.1 Plus
CG13722-PB 708 CG13722-PB 129..279 221..347 185 37.3 Plus
CG15021-PA 420 CG15021-PA 121..260 215..342 183 37.2 Plus
CG15021-PA 420 CG15021-PA 254..411 196..347 182 32.7 Plus
CG15021-PA 420 CG15021-PA 70..222 207..345 181 34.6 Plus
CG15021-PA 420 CG15021-PA 146..276 215..347 179 37.1 Plus
ena-PG 664 CG15112-PG 317..467 200..343 179 37.6 Plus
ena-PE 684 CG15112-PE 337..487 200..343 179 37.6 Plus
ena-PC 684 CG15112-PC 337..487 200..343 179 37.6 Plus
ena-PA 684 CG15112-PA 337..487 200..343 179 37.6 Plus
ena-PD 687 CG15112-PD 340..490 200..343 179 37.6 Plus
ena-PB 834 CG15112-PB 486..636 200..343 179 37.6 Plus
ena-PF 980 CG15112-PF 633..783 200..343 179 37.6 Plus
pAbp-PA 634 CG5119-PA 82..246 5..165 174 29.8 Plus
pAbp-PB 634 CG5119-PB 82..246 5..165 174 29.8 Plus
pAbp-PC 634 CG5119-PC 82..246 5..165 174 29.8 Plus
CG13722-PB 708 CG13722-PB 80..228 215..347 174 33.5 Plus
CG15021-PA 420 CG15021-PA 246..364 224..342 173 41.9 Plus
BOD1-PC 1109 CG5514-PC 397..501 207..321 164 36.8 Plus
BOD1-PA 1109 CG5514-PA 397..501 207..321 164 36.8 Plus
BOD1-PD 1150 CG5514-PD 397..501 207..321 164 36.8 Plus
BOD1-PB 1150 CG5514-PB 397..501 207..321 164 36.8 Plus
BOD1-PE 1151 CG5514-PE 397..501 207..321 164 36.8 Plus
CG13722-PB 708 CG13722-PB 328..466 221..342 162 35.9 Plus
CG13722-PB 708 CG13722-PB 442..589 215..347 162 33.8 Plus
CG13722-PB 708 CG13722-PB 375..529 221..347 160 32.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:27:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16317-PA 340 GI16317-PA 1..340 1..347 1195 84.2 Plus
Dmoj\GI18654-PA 645 GI18654-PA 2..162 13..174 280 37.8 Plus
Dmoj\GI22960-PA 475 GI22960-PA 2..174 8..180 240 32.2 Plus
Dmoj\GI11879-PA 724 GI11879-PA 135..293 24..177 186 34 Plus
Dmoj\GI20843-PA 303 GI20843-PA 3..82 10..89 170 42.5 Plus
Dmoj\GI18654-PA 645 GI18654-PA 185..368 15..183 165 26.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:27:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21313-PA 341 GL21313-PA 1..341 1..347 1275 93.1 Plus
Dper\GL11548-PA 640 GL11548-PA 2..162 13..174 273 37.2 Plus
Dper\GL24152-PA 464 GL24152-PA 2..174 8..180 249 33.3 Plus
Dper\GL26299-PA 678 GL26299-PA 121..274 24..177 205 35 Plus
Dper\GL14245-PA 618 GL14245-PA 115..290 8..190 198 29.2 Plus
Dper\GL11548-PA 640 GL11548-PA 185..368 15..183 157 25.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:27:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17684-PA 341 GA17684-PA 1..341 1..347 1274 92.8 Plus
Dpse\GA18673-PA 640 GA18673-PA 2..162 13..174 272 37.2 Plus
Dpse\GA18869-PA 464 GA18869-PA 2..174 8..180 249 33.3 Plus
Dpse\GA22715-PA 672 GA22715-PA 115..290 8..190 198 29.2 Plus
Dpse\GA28809-PA 692 GA28809-PA 130..288 24..177 188 34 Plus
Dpse\GA18673-PA 640 GA18673-PA 185..368 15..183 157 25.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:27:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12470-PA 299 GM12470-PA 1..262 1..254 1320 95.8 Plus
Dsec\GM21847-PA 634 GM21847-PA 2..162 13..174 273 37.2 Plus
Dsec\GM23518-PA 464 GM23518-PA 2..174 8..180 250 33.3 Plus
Dsec\GM21847-PA 634 GM21847-PA 82..284 5..202 190 27.7 Plus
Dsec\GM18380-PA 650 GM18380-PA 327..485 24..177 189 32.3 Plus
Dsec\Sxl-PA 301 GM17480-PA 133..265 29..163 176 30.4 Plus
Dsec\GM21847-PA 634 GM21847-PA 185..368 15..183 158 26.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:27:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11341-PA 379 GD11341-PA 2..162 13..174 260 37.2 Plus
Dsim\GD18328-PA 824 GD18328-PA 2..174 8..180 236 33.3 Plus
Dsim\GD17091-PA 371 GD17091-PA 37..194 24..165 176 26.2 Plus
Dsim\GD23195-PA 464 GD23195-PA 326..460 24..154 176 33.6 Plus
Dsim\GD11341-PA 379 GD11341-PA 82..246 5..165 175 29.8 Plus
Dsim\GD11288-PA 301 GD11288-PA 3..82 10..89 174 43.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:27:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15655-PA 340 GJ15655-PA 1..340 1..347 1216 90.2 Plus
Dvir\GJ21671-PA 645 GJ21671-PA 2..162 13..174 278 37.8 Plus
Dvir\GJ14540-PA 472 GJ14540-PA 2..174 8..180 246 32.8 Plus
Dvir\GJ21671-PA 645 GJ21671-PA 82..283 5..201 187 27.8 Plus
Dvir\GJ13991-PA 725 GJ13991-PA 113..271 24..177 184 33.3 Plus
Dvir\GJ10859-PA 388 GJ10859-PA 42..181 26..167 179 30.1 Plus
Dvir\GJ21671-PA 645 GJ21671-PA 185..368 15..183 163 26.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:27:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19717-PA 339 GK19717-PA 1..339 1..347 1258 93.1 Plus
Dwil\GK19652-PA 638 GK19652-PA 2..162 13..174 277 37.2 Plus
Dwil\GK11939-PA 469 GK11939-PA 2..174 8..180 247 33.3 Plus
Dwil\GK19652-PA 638 GK19652-PA 82..284 5..202 199 28.6 Plus
Dwil\GK14865-PA 725 GK14865-PA 132..290 24..177 180 34 Plus
Dwil\GK16445-PA 373 GK16445-PA 132..269 24..163 173 29.3 Plus
Dwil\GK19652-PA 638 GK19652-PA 223..368 54..183 165 29.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:27:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16738-PA 339 GE16738-PA 1..339 1..347 1705 95.7 Plus
Dyak\GE11925-PA 634 GE11925-PA 2..162 13..174 273 37.2 Plus
Dyak\GE10834-PA 464 GE10834-PA 2..174 8..180 248 33.3 Plus
Dyak\GE11925-PA 634 GE11925-PA 82..284 5..202 190 27.7 Plus
Dyak\GE18193-PA 446 GE18193-PA 123..281 24..177 188 34 Plus
Dyak\GE16683-PA 563 GE16683-PA 124..261 24..163 179 27.9 Plus
Dyak\GE11925-PA 634 GE11925-PA 185..368 15..183 152 26.1 Plus

RE50839.hyp Sequence

Translation from 77 to 1120

> RE50839.hyp
MAAGPIAERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVT
QMHQGYGFVEFLSEEDADYGIKIMNMIKLYGKPIRVNKASAHQKNLDVGA
NIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAFINFA
SFEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGERHGSAAERLLAAQNP
STHADRPHQLFADAPVQTMMPQMPGQIPAQMPGQMMPPPMMAPPPPVVPV
SNNNMGMLAPPPPVPQPAPFPATIPPPPLPPMTGGQPPLPPAMGIPPPPR
MMQPNAWAPPGMPAPPPRPPPTNWRPPPVPFPPTPYARPYQPDGYQY*

RE50839.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:21:13
Subject Length Description Subject Range Query Range Score Percent Strand
Spx-PA 347 CG3780-PA 1..347 1..347 1896 100 Plus
Rb97D-PE 434 CG6354-PE 25..392 6..346 268 28.8 Plus
Rb97D-PD 434 CG6354-PD 25..392 6..346 268 28.8 Plus
Rb97D-PG 465 CG6354-PG 25..392 6..346 268 28.8 Plus
Rb97D-PC 465 CG6354-PC 25..392 6..346 268 28.8 Plus