BDGP Sequence Production Resources |
Search the DGRC for RE51073
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 510 |
Well: | 73 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG4133-RA |
Protein status: | RE51073.pep: gold |
Preliminary Size: | 2240 |
Sequenced Size: | 2633 |
Gene | Date | Evidence |
---|---|---|
CG4133 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4133 | 2002-01-03 | Blastp of sequenced clone |
CG4133 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4133 | 2008-04-29 | Release 5.5 accounting |
CG4133 | 2008-08-15 | Release 5.9 accounting |
CG4133 | 2008-12-18 | 5.12 accounting |
2633 bp (2633 high quality bases) assembled on 2002-01-03
GenBank Submission: AY075499
> RE51073.complete AGAGAGCGAAGAAATTTGTACCAGTGCGGACGTGGACAAGCTCGATCCAG CTTTATTATTTATTTTATCAGAAAGCAGAACCCACAACCGAAAAAACCAG TCATTGGCAAGGCTAAAAGATATTATTGCCTACCATCCTTTACTTCATAC CTCGCATTGGAAAGTGAAGTTGAGTTGGAAAAGGAGAACTAGAAAAAGGA TTTCTAGACCGAAAAAACAAGACACCAACAGCACAACGACCATAAATACA TAGTATGAATGTCGCCTAAATATCATAATTTCGAGATTGCACTGGTCTAC TTTCTGCTGCTAATACCATGGCCACCCACGAATGTGATCAGAATCCTCTG CTCGCGAGATAACAGCCGACTGGTGCGCAAAATAGTGCGCTCCAAATGGA CTCCCATTCTGGACAAGCATCAGGTGAAGCTGCCGCTGGAGTGCCCGCTC CATCCGTTCCGGGATGTCTTTGCCCCCCGCCAGGATGCCAAGCAGAGGGA TCGACCTACTCAGTGGACGTGCAGGAAATGTGGCAAGAGCTTCTACCAGG AGAAGCATCTGGACTTACATTTCGACACACGCCACAAGAGCATCATCAAT GAGGCGGAGGATGCCGTTTGCCTGGCCGACTTCTGCGACATTATGCGGTG TGAGGTATTTGAAACGGAGGACGCATCTAGCCTGAAGTTTGGTGACCAGC ACATTGTCACGGACATCGAGGTCTGGGGCGACTCCCTGGGCCAGAACTCC GCGTTGGCCAAAGCGAATGCTGCCTACTTGAGCTTAATACCTAGAACTTC CACATTGGGTGCCTCGCGTGCCGCCAAAGTACAAAATCGTCAATTACTTC AAGACAAGCCAAGCCAGGCCAGCAAGCAGAATCAGTCACCGGCAGGTGAG CGAACACATCCCCAATCCCACCACCATCCCCGAGATCGTGCATCCACCAC AGCCAATCCCCTTCGCCTAGATCCATCGCCGGAGGACGGGTCGGCGGCTA GGCCCAGGTCGGCGGGCGAGAAGCTGCTTAACAAGCTTAAGGAGCTGGGG AAGGCGCACCTAAAGCCGGCAGCGGATCCGGAGGCCAGCAGGCAGAACGA GACCGGCGAGGAGGAGGACGAAAAGGGGAGTGGACAACCTGAGGGCAGTG GCCAGTCCGCTGATGAGGTCAAAACGGAGGAGGGATCGGGGGCTAATGGA AACGGAAACAAGGCCAGAGCCAATTGCAAGCCGGAGGAGTTGAGTAAGCT GAAGAACCGCTGCGAGATCCTGCTAAGGAGCTGCATCGGGGGATTGCTGC TGTCCATGTCGGATCAGGCCTTCAAGGAGATGGAAGATGAAATGAACAAG GCGGTGTGCTGGTACTTGACTTGCGATCGATACTGGGAGGATGGTCCCTT GGAGCCCCGAGCCTTTCCCTGGGGTCTAATCGTGATCCTGATCTTCGTAC TCTCCACTGGGATCTGCTTCTGCTACTACATTATCTGGATCCTGTTCGAC TCCGAAGAAACGACAATCAACGCGAACCACTACTACGGCCAGGGATCCAT CGGCGCCGGCGGGAGCATCTACATGCCAGGAGCAGCAGCGGGTCATCACT ACCATGTGGACTATGCCACGCGGCACGACCTCGACCTGGACGCCGGCGGG ATAGCTGGTCAGCAGCAGCAACAGCAGCACCTGCTTCAGGAGCAGCAGTA CTATTACCAACAGCAGCAGCAACAGCAGCAGCAGGCAGCATCCGTTCGGG ACTTGTACCCGGAGCAGGTTCAGTATCATCGCCACAGTCCGCGGCACTAC ATCGCCGATCAGCGTCCGGTGGGGCCAACAGTGGGCACGCCCACCCAAGG GGCCGTTCGCAGCAGCTCCTCCAACGCCAACACGCCGTTGCACCATCGGG TGCAGCATTCGGGACAGCATCCCCACCTGCAACATCGTCACTCGACGAGC CTGGCCTACCCACAGGACATTTTAGACCGACGCGACTATACAAGTAGCTC CTCTCGCCAGATTGCCACCAACATAGTGGCTGGATCAGGATCGGGACAAG GCGCTGGAGCTCCTGGCGATACACAGCGTCACTACAACACGCATCCGCGG CCGCTGGAAACGAGGCATCGCCATGTGGGTTCCTCGCAGCAATCCCTTCG TGCCTCTGCCTCCACGCACGAGATTGTGCAGCAGGAGGCGGGTCTGGGTC AGAACGAGCACTACATCTACGTGACCTATCCACCGGACCTCAAGAAGCGC TACTTCGAGTGATGCACTGGGTCTGGACTGGGTGCGCTCACAGATGATCG CATTGTGGAGACTATGGTCGAGCTTTCAAAGAGTAGATTGGATTGATTGA CCGGCAGATGGAGTGACCAAAGGGCCTTCAAAAGGAGATCCAAGAAACGA TACCAAAGCCAGAGTTCAACTACAGTTGATCTTACATATTATGAGGATAT TGAATGACCTTGAATGAGCGGAGGTCTGGTCGCCAACATAGCCCCAAAAG TTGGATTTTTACTTTTAGCCTGCAAATTCTAGATTTGTGAACTGTGCTAT TCTTTTTTAATTCTACAAAATAAATTGCAATATTTCTGTACAATAAAAAA TAATGGTTATTTAATGGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4133-RA | 2691 | CG4133-RA | 45..2662 | 1..2618 | 13090 | 100 | Plus |
CG4133.b | 2561 | CG4133.b | 893..2561 | 950..2618 | 8345 | 100 | Plus |
CG4133.c | 2675 | CG4133.c | 45..1543 | 1..1499 | 7495 | 100 | Plus |
CG4133.c | 2675 | CG4133.c | 1557..2675 | 1500..2618 | 5595 | 100 | Plus |
CG4133.b | 2561 | CG4133.b | 1..895 | 1..895 | 4475 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 457663..458780 | 1500..2617 | 5545 | 99.7 | Plus |
chr2L | 23010047 | chr2L | 456828..457373 | 791..1336 | 2715 | 99.8 | Plus |
chr2L | 23010047 | chr2L | 455582..455866 | 1..285 | 1395 | 99.3 | Plus |
chr2L | 23010047 | chr2L | 456576..456768 | 602..794 | 950 | 99.5 | Plus |
chr2L | 23010047 | chr2L | 456326..456508 | 422..604 | 915 | 100 | Plus |
chr2L | 23010047 | chr2L | 457433..457597 | 1335..1499 | 825 | 100 | Plus |
chr2L | 23010047 | chr2L | 456123..456264 | 284..425 | 710 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 457628..458746 | 1500..2618 | 5595 | 100 | Plus |
2L | 23513712 | 2L | 456793..457338 | 791..1336 | 2730 | 100 | Plus |
2L | 23513712 | 2L | 455543..455827 | 1..285 | 1425 | 100 | Plus |
2L | 23513712 | 2L | 456537..456729 | 602..794 | 965 | 100 | Plus |
2L | 23513712 | 2L | 456287..456469 | 422..604 | 915 | 100 | Plus |
2L | 23513712 | 2L | 457398..457562 | 1335..1499 | 825 | 100 | Plus |
2L | 23513712 | 2L | 456084..456225 | 284..425 | 710 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 457628..458746 | 1500..2618 | 5595 | 100 | Plus |
2L | 23513712 | 2L | 456793..457338 | 791..1336 | 2730 | 100 | Plus |
2L | 23513712 | 2L | 455543..455827 | 1..285 | 1425 | 100 | Plus |
2L | 23513712 | 2L | 456537..456729 | 602..794 | 965 | 100 | Plus |
2L | 23513712 | 2L | 456287..456469 | 422..604 | 915 | 100 | Plus |
2L | 23513712 | 2L | 457398..457562 | 1335..1499 | 825 | 100 | Plus |
2L | 23513712 | 2L | 456084..456225 | 284..425 | 710 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 1310..1360 | 1311..1261 | 120 | 70.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 455582..455866 | 1..285 | 99 | -> | Plus |
chr2L | 456125..456262 | 286..423 | 100 | -> | Plus |
chr2L | 456328..456507 | 424..603 | 100 | -> | Plus |
chr2L | 456578..456768 | 604..794 | 99 | -> | Plus |
chr2L | 456832..457373 | 795..1336 | 99 | -> | Plus |
chr2L | 457435..457597 | 1337..1499 | 100 | -> | Plus |
chr2L | 457663..457822 | 1500..1659 | 100 | == | Plus |
chr2L | 457904..458780 | 1741..2617 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4133-RA | 1..2004 | 259..2262 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4133-RA | 1..2004 | 259..2262 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4133-RA | 1..2004 | 259..2262 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4133-RA | 1..2004 | 259..2262 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4133-RA | 1..2004 | 259..2262 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4133-RA | 1..2617 | 1..2617 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4133-RA | 1..2617 | 1..2617 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4133-RA | 13..2629 | 1..2617 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4133-RA | 1..2617 | 1..2617 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4133-RA | 13..2629 | 1..2617 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 456539..456729 | 604..794 | 100 | -> | Plus |
2L | 455543..455827 | 1..285 | 100 | -> | Plus |
2L | 456086..456223 | 286..423 | 100 | -> | Plus |
2L | 456289..456468 | 424..603 | 100 | -> | Plus |
2L | 456797..457338 | 795..1336 | 100 | -> | Plus |
2L | 457400..457562 | 1337..1499 | 100 | -> | Plus |
2L | 457628..458745 | 1500..2617 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 456539..456729 | 604..794 | 100 | -> | Plus |
2L | 455543..455827 | 1..285 | 100 | -> | Plus |
2L | 456086..456223 | 286..423 | 100 | -> | Plus |
2L | 456289..456468 | 424..603 | 100 | -> | Plus |
2L | 456797..457338 | 795..1336 | 100 | -> | Plus |
2L | 457400..457562 | 1337..1499 | 100 | -> | Plus |
2L | 457628..458745 | 1500..2617 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 456539..456729 | 604..794 | 100 | -> | Plus |
2L | 455543..455827 | 1..285 | 100 | -> | Plus |
2L | 456086..456223 | 286..423 | 100 | -> | Plus |
2L | 456289..456468 | 424..603 | 100 | -> | Plus |
2L | 456797..457338 | 795..1336 | 100 | -> | Plus |
2L | 457400..457562 | 1337..1499 | 100 | -> | Plus |
2L | 457628..458745 | 1500..2617 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 456539..456729 | 604..794 | 100 | -> | Plus |
arm_2L | 455543..455827 | 1..285 | 100 | -> | Plus |
arm_2L | 456086..456223 | 286..423 | 100 | -> | Plus |
arm_2L | 456289..456468 | 424..603 | 100 | -> | Plus |
arm_2L | 456797..457338 | 795..1336 | 100 | -> | Plus |
arm_2L | 457400..457562 | 1337..1499 | 100 | -> | Plus |
arm_2L | 457628..458745 | 1500..2617 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 455543..455827 | 1..285 | 100 | -> | Plus |
2L | 456086..456223 | 286..423 | 100 | -> | Plus |
2L | 456289..456468 | 424..603 | 100 | -> | Plus |
2L | 456539..456729 | 604..794 | 100 | -> | Plus |
2L | 456797..457338 | 795..1336 | 100 | -> | Plus |
2L | 457400..457562 | 1337..1499 | 100 | -> | Plus |
2L | 457628..458745 | 1500..2617 | 100 | Plus |
Translation from 258 to 2261
> RE51073.hyp MSPKYHNFEIALVYFLLLIPWPPTNVIRILCSRDNSRLVRKIVRSKWTPI LDKHQVKLPLECPLHPFRDVFAPRQDAKQRDRPTQWTCRKCGKSFYQEKH LDLHFDTRHKSIINEAEDAVCLADFCDIMRCEVFETEDASSLKFGDQHIV TDIEVWGDSLGQNSALAKANAAYLSLIPRTSTLGASRAAKVQNRQLLQDK PSQASKQNQSPAGERTHPQSHHHPRDRASTTANPLRLDPSPEDGSAARPR SAGEKLLNKLKELGKAHLKPAADPEASRQNETGEEEDEKGSGQPEGSGQS ADEVKTEEGSGANGNGNKARANCKPEELSKLKNRCEILLRSCIGGLLLSM SDQAFKEMEDEMNKAVCWYLTCDRYWEDGPLEPRAFPWGLIVILIFVLST GICFCYYIIWILFDSEETTINANHYYGQGSIGAGGSIYMPGAAAGHHYHV DYATRHDLDLDAGGIAGQQQQQQHLLQEQQYYYQQQQQQQQQAASVRDLY PEQVQYHRHSPRHYIADQRPVGPTVGTPTQGAVRSSSSNANTPLHHRVQH SGQHPHLQHRHSTSLAYPQDILDRRDYTSSSSRQIATNIVAGSGSGQGAG APGDTQRHYNTHPRPLETRHRHVGSSQQSLRASASTHEIVQQEAGLGQNE HYIYVTYPPDLKKRYFE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4133-PA | 667 | CG4133-PA | 1..667 | 1..667 | 3576 | 100 | Plus |
CG4133-PB | 642 | CG4133-PB | 1..642 | 1..667 | 3400 | 96.3 | Plus |
CG4133-PC | 583 | CG4133-PC | 1..414 | 1..414 | 2217 | 100 | Plus |
dar1-PB | 751 | CG12029-PB | 307..491 | 468..659 | 162 | 31 | Plus |
Translation from 258 to 2261
> RE51073.pep MSPKYHNFEIALVYFLLLIPWPPTNVIRILCSRDNSRLVRKIVRSKWTPI LDKHQVKLPLECPLHPFRDVFAPRQDAKQRDRPTQWTCRKCGKSFYQEKH LDLHFDTRHKSIINEAEDAVCLADFCDIMRCEVFETEDASSLKFGDQHIV TDIEVWGDSLGQNSALAKANAAYLSLIPRTSTLGASRAAKVQNRQLLQDK PSQASKQNQSPAGERTHPQSHHHPRDRASTTANPLRLDPSPEDGSAARPR SAGEKLLNKLKELGKAHLKPAADPEASRQNETGEEEDEKGSGQPEGSGQS ADEVKTEEGSGANGNGNKARANCKPEELSKLKNRCEILLRSCIGGLLLSM SDQAFKEMEDEMNKAVCWYLTCDRYWEDGPLEPRAFPWGLIVILIFVLST GICFCYYIIWILFDSEETTINANHYYGQGSIGAGGSIYMPGAAAGHHYHV DYATRHDLDLDAGGIAGQQQQQQHLLQEQQYYYQQQQQQQQQAASVRDLY PEQVQYHRHSPRHYIADQRPVGPTVGTPTQGAVRSSSSNANTPLHHRVQH SGQHPHLQHRHSTSLAYPQDILDRRDYTSSSSRQIATNIVAGSGSGQGAG APGDTQRHYNTHPRPLETRHRHVGSSQQSLRASASTHEIVQQEAGLGQNE HYIYVTYPPDLKKRYFE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20663-PA | 701 | GF20663-PA | 1..701 | 1..667 | 2691 | 79.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24723-PA | 669 | GG24723-PA | 1..669 | 1..667 | 3573 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11227-PA | 635 | GH11227-PA | 7..632 | 12..667 | 2303 | 70.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4133-PA | 667 | CG4133-PA | 1..667 | 1..667 | 3576 | 100 | Plus |
CG4133-PB | 642 | CG4133-PB | 1..642 | 1..667 | 3400 | 96.3 | Plus |
CG4133-PC | 583 | CG4133-PC | 1..414 | 1..414 | 2217 | 100 | Plus |
dar1-PB | 751 | CG12029-PB | 307..491 | 468..659 | 162 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21701-PA | 639 | GI21701-PA | 7..636 | 12..667 | 2312 | 71.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18880-PA | 683 | GL18880-PA | 1..391 | 1..385 | 1519 | 79 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17979-PA | 684 | GA17979-PA | 1..681 | 1..667 | 2331 | 74.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16746-PA | 652 | GM16746-PA | 1..652 | 1..667 | 3473 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23028-PA | 667 | GD23028-PA | 1..667 | 1..667 | 3585 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17779-PA | 625 | GJ17779-PA | 7..622 | 12..667 | 2166 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24396-PA | 754 | GK24396-PA | 1..670 | 1..667 | 2241 | 65.9 | Plus |
Dwil\GK24396-PA | 754 | GK24396-PA | 603..751 | 510..667 | 313 | 49.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16858-PA | 669 | GE16858-PA | 1..669 | 1..667 | 3562 | 98.5 | Plus |