BDGP Sequence Production Resources |
Search the DGRC for RE51662
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 516 |
Well: | 62 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Mipp1-RA |
Protein status: | RE51662.pep: gold |
Preliminary Size: | 1728 |
Sequenced Size: | 1773 |
Gene | Date | Evidence |
---|---|---|
CG4123 | 2001-12-14 | Blastp of sequenced clone |
CG4123 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4123 | 2003-01-01 | Sim4 clustering to Release 3 |
Mipp1 | 2008-04-29 | Release 5.5 accounting |
Mipp1 | 2008-08-15 | Release 5.9 accounting |
Mipp1 | 2008-12-18 | 5.12 accounting |
1773 bp (1773 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071426
> RE51662.complete AGTAAACTTGAACGTCTGAAACGATGGAGGTGGACTTTGGGGCGCTCTAT TATTAGTTGAATCAGAGCTATGCGCCTGCTGATATTGCTACTGCTGCCAC TGGTGGCCATCGCCCAAGATGACTACTGCTTCAGCAAGGACACCTCCCGC CTCCAGACCCGCCAGTTCTCCTCGAAGACCGCCTATCAGATCGTCAAGGG CACGGACATTGACAAGCAGTACCTGGTGCCCGGCTGTCAGCCCCAGAAGA TGTGGATCTTTCACAGGCACGGCACACGACTGCCCAAGAAGAGCATGATC AACAAGGCGTCCAGGGTGGCTGAGCTGCGCGATCTCATCATTAACAACTA CCAAGTGGCCAGGACCAAGCCCGAAACGGATGCTCTCTGCCAGACGGATC TGATTGCCATCAAGTTGTGGAAGTGGAACAGCAGCATAACGCCCGACATG GAGGAGTATCTGACCGCCCAGGGCTACGAGGATCTCAGGGGCACGGCCAA GCTGTACCAGCGGTACTATCCCACTGTGCTGACCGCTAACTATAATGACA CTTACTACCAGTTCCGCCATACGGACACCCAGCGCACCACGGAAAGTTTC AAGGCTTTCGCCGAGGGTCTGTTTGGATCCCAAAACGCTGCTCATCCCGT CGAGATTCCCAAGCAGGATCTGCTGCTGCGTCCCTATGACTATTGCTCCT CTTTCAAGAATGTGAACTACAAGGATGAGGGCTCTGAGTACTACAAGTTT CATCAGTCGAAGCTGTACAACGACACGTTGGCGGATATCTCCACTCGATT GGGTTTCCTTTACACCCTGGAGGAGGCGGACATCAAGCTAATGTACGATA TGTGTCGCTATGAGCAGGCGTGGAATGTGGACCGCAATAGCGTCTGGTGC GGCGCCTTCTTGCCGGAGCAAATAACGGTCTTTGAGTACCTGGAAGATCT AAAGTACTACTATGGCTCGGGCTATGGTTTCCCGGAAAACGCACATCTCA ACTGCCGACTGGTGCAGGACCTGCTCACCCACCTGAGCAATCCGGTGTCG CCGCATGTGGTAGCTCATTTCGGTCACTCGACTGGTCTCCTAACTCTCCT AACTGCGCTGGGAATCCAGAAGGACGACATCAAGTTGCGGGCAGACAATT ACGATAGTTTGACGAGCCGCCGTTGGAAGAGCAGCCTGATCGATCCGTTT GCCGCCAATTTCGTGGCGGTGAAATACGACTGTCCGGCGGACTTGGATCG CGAGAAGGTGGTCTTCTTCCTCAACCAGCAGGCCGTGCAGCTGGACTGGT GCAGCGTCGGTCTGTGCAAGTGGTCAGATGTCCTCGAGAAGTACAAGACC ATTGCGGATGCGGATTGTGGAGAATACTACTGCCGGACGGGAGGTGCTCC ATCGCTGGGATCCGGAGTTGGCGGACTTCTGGCCACCACGCTCGCCGCCA TGCTGGTCTACTTAATGCACTAACTTTCGATTAGATTAGTTTTTAATTCG TAATGTACAAATTTCGTACCAAATGGAGGGACGCCACGCGGCGGATGTCA GTCAAGTATTTTTCGATTTAGATTTTTTTACTTTTAATCCAGCAACAGCA CAATTCTTCACACAGTCAAGAAGTCACACTACACACAAAAAACACACACA ACCAGATACTGAAATGTTCAACTTAACGATTTTTCTAAACGCTTAATGAA CGTTGATGGCGCTCCAGTCAGAATTAGCTTTATATTAACTGAATAAAATG AGTCTTTAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 16553398..16554278 | 1757..877 | 4390 | 99.9 | Minus |
chr3L | 24539361 | chr3L | 16555370..16555631 | 324..63 | 1310 | 100 | Minus |
chr3L | 24539361 | chr3L | 16554480..16554723 | 803..560 | 1220 | 100 | Minus |
chr3L | 24539361 | chr3L | 16554794..16555032 | 561..323 | 1195 | 100 | Minus |
chr3L | 24539361 | chr3L | 16554334..16554410 | 879..803 | 385 | 100 | Minus |
chr3L | 24539361 | chr3L | 16563036..16563100 | 65..1 | 325 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 16563633..16564517 | 1761..877 | 4425 | 100 | Minus |
3L | 28110227 | 3L | 16565609..16565870 | 324..63 | 1310 | 100 | Minus |
3L | 28110227 | 3L | 16564719..16564962 | 803..560 | 1220 | 100 | Minus |
3L | 28110227 | 3L | 16565033..16565271 | 561..323 | 1195 | 100 | Minus |
3L | 28110227 | 3L | 16564573..16564649 | 879..803 | 385 | 100 | Minus |
3L | 28110227 | 3L | 16573266..16573330 | 65..1 | 325 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 16556733..16557617 | 1761..877 | 4425 | 100 | Minus |
3L | 28103327 | 3L | 16558709..16558970 | 324..63 | 1310 | 100 | Minus |
3L | 28103327 | 3L | 16557819..16558062 | 803..560 | 1220 | 100 | Minus |
3L | 28103327 | 3L | 16558133..16558371 | 561..323 | 1195 | 100 | Minus |
3L | 28103327 | 3L | 16557673..16557749 | 879..803 | 385 | 100 | Minus |
3L | 28103327 | 3L | 16566366..16566430 | 65..1 | 325 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 16553398..16554278 | 877..1757 | 99 | <- | Minus |
chr3L | 16554337..16554409 | 804..876 | 100 | <- | Minus |
chr3L | 16554480..16554721 | 562..803 | 100 | <- | Minus |
chr3L | 16554794..16555030 | 325..561 | 100 | <- | Minus |
chr3L | 16555370..16555628 | 66..324 | 100 | <- | Minus |
chr3L | 16563036..16563100 | 1..65 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mipp1-RA | 1..1404 | 70..1473 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mipp1-RA | 1..1404 | 70..1473 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mipp1-RB | 1..1404 | 70..1473 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mipp1-RA | 1..1404 | 70..1473 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mipp1-RB | 1..1404 | 70..1473 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mipp1-RB | 1..1757 | 1..1757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mipp1-RB | 1..1757 | 1..1757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mipp1-RB | 5..1761 | 1..1757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mipp1-RB | 1..1757 | 1..1757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mipp1-RB | 5..1761 | 1..1757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16563637..16564517 | 877..1757 | 100 | <- | Minus |
3L | 16564576..16564648 | 804..876 | 100 | <- | Minus |
3L | 16564719..16564960 | 562..803 | 100 | <- | Minus |
3L | 16565033..16565269 | 325..561 | 100 | <- | Minus |
3L | 16565609..16565867 | 66..324 | 100 | <- | Minus |
3L | 16573266..16573330 | 1..65 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16563637..16564517 | 877..1757 | 100 | <- | Minus |
3L | 16564576..16564648 | 804..876 | 100 | <- | Minus |
3L | 16564719..16564960 | 562..803 | 100 | <- | Minus |
3L | 16565033..16565269 | 325..561 | 100 | <- | Minus |
3L | 16565609..16565867 | 66..324 | 100 | <- | Minus |
3L | 16573266..16573330 | 1..65 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16563637..16564517 | 877..1757 | 100 | <- | Minus |
3L | 16564576..16564648 | 804..876 | 100 | <- | Minus |
3L | 16564719..16564960 | 562..803 | 100 | <- | Minus |
3L | 16565033..16565269 | 325..561 | 100 | <- | Minus |
3L | 16565609..16565867 | 66..324 | 100 | <- | Minus |
3L | 16573266..16573330 | 1..65 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 16556737..16557617 | 877..1757 | 100 | <- | Minus |
arm_3L | 16557676..16557748 | 804..876 | 100 | <- | Minus |
arm_3L | 16557819..16558060 | 562..803 | 100 | <- | Minus |
arm_3L | 16558133..16558369 | 325..561 | 100 | <- | Minus |
arm_3L | 16558709..16558967 | 66..324 | 100 | <- | Minus |
arm_3L | 16566366..16566430 | 1..65 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16557819..16558060 | 562..803 | 100 | <- | Minus |
3L | 16556737..16557617 | 877..1757 | 100 | <- | Minus |
3L | 16557676..16557748 | 804..876 | 100 | <- | Minus |
3L | 16558133..16558369 | 325..561 | 100 | <- | Minus |
3L | 16558709..16558967 | 66..324 | 100 | <- | Minus |
3L | 16566366..16566430 | 1..65 | 100 | Minus |
Translation from 69 to 1472
> RE51662.pep MRLLILLLLPLVAIAQDDYCFSKDTSRLQTRQFSSKTAYQIVKGTDIDKQ YLVPGCQPQKMWIFHRHGTRLPKKSMINKASRVAELRDLIINNYQVARTK PETDALCQTDLIAIKLWKWNSSITPDMEEYLTAQGYEDLRGTAKLYQRYY PTVLTANYNDTYYQFRHTDTQRTTESFKAFAEGLFGSQNAAHPVEIPKQD LLLRPYDYCSSFKNVNYKDEGSEYYKFHQSKLYNDTLADISTRLGFLYTL EEADIKLMYDMCRYEQAWNVDRNSVWCGAFLPEQITVFEYLEDLKYYYGS GYGFPENAHLNCRLVQDLLTHLSNPVSPHVVAHFGHSTGLLTLLTALGIQ KDDIKLRADNYDSLTSRRWKSSLIDPFAANFVAVKYDCPADLDREKVVFF LNQQAVQLDWCSVGLCKWSDVLEKYKTIADADCGEYYCRTGGAPSLGSGV GGLLATTLAAMLVYLMH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10522-PA | 467 | GF10522-PA | 18..467 | 17..467 | 2055 | 82 | Plus |
Dana\GF20313-PA | 2062 | GF20313-PA | 57..224 | 32..205 | 245 | 35.8 | Plus |
Dana\GF20313-PA | 2062 | GF20313-PA | 1851..2031 | 241..413 | 218 | 32.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15873-PA | 467 | GG15873-PA | 1..467 | 1..467 | 2445 | 96.6 | Plus |
Dere\GG17695-PA | 241 | GG17695-PA | 8..205 | 5..204 | 239 | 31.7 | Plus |
Dere\GG17696-PA | 1858 | GG17696-PA | 1645..1855 | 241..440 | 217 | 30.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24977-PA | 465 | GH24977-PA | 18..465 | 15..467 | 1768 | 70.2 | Plus |
Dgri\GH15581-PA | 529 | GH15581-PA | 82..529 | 15..467 | 1767 | 70 | Plus |
Dgri\GH24109-PA | 448 | GH24109-PA | 33..432 | 20..426 | 452 | 29.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mipp1-PC | 467 | CG4123-PC | 1..467 | 1..467 | 2495 | 100 | Plus |
Mipp1-PA | 467 | CG4123-PA | 1..467 | 1..467 | 2495 | 100 | Plus |
Mipp1-PB | 467 | CG4123-PB | 1..467 | 1..467 | 2495 | 100 | Plus |
Mipp2-PA | 453 | CG4317-PA | 10..452 | 3..439 | 473 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16858-PA | 464 | GI16858-PA | 15..464 | 13..467 | 1771 | 70.3 | Plus |
Dmoj\GI16368-PA | 442 | GI16368-PA | 12..403 | 5..406 | 489 | 30.7 | Plus |
Dmoj\GI10863-PA | 66 | GI10863-PA | 1..66 | 398..467 | 237 | 62.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17983-PA | 472 | GL17983-PA | 19..472 | 15..467 | 1897 | 76 | Plus |
Dper\GL14954-PA | 1648 | GL14954-PA | 27..194 | 31..204 | 234 | 32.4 | Plus |
Dper\GL14954-PA | 1648 | GL14954-PA | 1447..1613 | 247..411 | 202 | 33.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17974-PA | 472 | GA17974-PA | 19..472 | 15..467 | 1899 | 76.2 | Plus |
Dpse\GA22271-PA | 222 | GA22271-PA | 49..216 | 31..204 | 231 | 32.4 | Plus |
Dpse\GA18105-PA | 1918 | GA18105-PA | 1717..1883 | 247..411 | 200 | 33.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24391-PA | 467 | GM24391-PA | 1..467 | 1..467 | 2498 | 98.7 | Plus |
Dsec\GM12595-PA | 453 | GM12595-PA | 19..452 | 12..439 | 436 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12462-PA | 467 | GD12462-PA | 1..467 | 1..467 | 2498 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12608-PA | 464 | GJ12608-PA | 14..464 | 12..467 | 1833 | 73 | Plus |
Dvir\GJ12609-PA | 462 | GJ12609-PA | 14..462 | 12..467 | 1733 | 69.3 | Plus |
Dvir\GJ16740-PA | 221 | GJ16740-PA | 26..204 | 247..425 | 267 | 35.1 | Plus |
Dvir\GJ16739-PA | 1654 | GJ16739-PA | 11..206 | 4..204 | 237 | 32.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17479-PA | 466 | GK17479-PA | 19..466 | 15..467 | 1906 | 75.7 | Plus |
Dwil\GK17412-PA | 1985 | GK17412-PA | 37..206 | 28..204 | 241 | 33.9 | Plus |
Dwil\GK17412-PA | 1985 | GK17412-PA | 1785..1949 | 247..411 | 224 | 34.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22212-PA | 467 | GE22212-PA | 1..467 | 1..467 | 2446 | 96.6 | Plus |
Dyak\GE16484-PA | 1143 | GE16484-PA | 20..209 | 12..208 | 236 | 30.8 | Plus |
Dyak\GE16484-PA | 1143 | GE16484-PA | 932..1142 | 241..442 | 207 | 29.4 | Plus |
Translation from 69 to 1472
> RE51662.hyp MRLLILLLLPLVAIAQDDYCFSKDTSRLQTRQFSSKTAYQIVKGTDIDKQ YLVPGCQPQKMWIFHRHGTRLPKKSMINKASRVAELRDLIINNYQVARTK PETDALCQTDLIAIKLWKWNSSITPDMEEYLTAQGYEDLRGTAKLYQRYY PTVLTANYNDTYYQFRHTDTQRTTESFKAFAEGLFGSQNAAHPVEIPKQD LLLRPYDYCSSFKNVNYKDEGSEYYKFHQSKLYNDTLADISTRLGFLYTL EEADIKLMYDMCRYEQAWNVDRNSVWCGAFLPEQITVFEYLEDLKYYYGS GYGFPENAHLNCRLVQDLLTHLSNPVSPHVVAHFGHSTGLLTLLTALGIQ KDDIKLRADNYDSLTSRRWKSSLIDPFAANFVAVKYDCPADLDREKVVFF LNQQAVQLDWCSVGLCKWSDVLEKYKTIADADCGEYYCRTGGAPSLGSGV GGLLATTLAAMLVYLMH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mipp1-PC | 467 | CG4123-PC | 1..467 | 1..467 | 2495 | 100 | Plus |
Mipp1-PA | 467 | CG4123-PA | 1..467 | 1..467 | 2495 | 100 | Plus |
Mipp1-PB | 467 | CG4123-PB | 1..467 | 1..467 | 2495 | 100 | Plus |
Mipp2-PA | 453 | CG4317-PA | 10..452 | 3..439 | 473 | 29.7 | Plus |