BDGP Sequence Production Resources |
Search the DGRC for RE51791
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 517 |
Well: | 91 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG8891-RA |
Protein status: | RE51791.pep: gold |
Preliminary Size: | 576 |
Sequenced Size: | 783 |
Gene | Date | Evidence |
---|---|---|
CG8891 | 2001-12-14 | Blastp of sequenced clone |
CG8891 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8891 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8891 | 2008-04-29 | Release 5.5 accounting |
CG8891 | 2008-08-15 | Release 5.9 accounting |
CG8891 | 2008-12-18 | 5.12 accounting |
783 bp (783 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071428
> RE51791.complete AAGCTAAGCAGAAAACAGCTGATTTGGCCGCATGCTTTAGTCTTGCAAAT GGCGTTGAATACTGCGGCCAATTGTTTAAATTGAGGGCGACAATTTAATC TGTACCGTCATGTCGAAACCAATTACCTTTGTCACCGGCAACGCCAAGAA GCTGGAAGAGTTGGTTGCCATCCTGGGACCCAGTTTCCCGCGCACCATTG TGTCAAAGAAGATTGATCTTCCGGAATTGCAAGGCGACATCGACGAGATT GCCATCAAGAAGTGCAAGGAGGCAGCGCGTCAGGTGAATGGACCCGTGCT GGTGGAGGACACTAGTCTGTGCTTCAATGCGCTGGAGGGCTTGCCGGGTC CGTACATCAAATGGTTCCTGGAGAAGCTGCAGCCGGAGGGGTTACACCGT CTGCTCCATGGTTGGGAGAACAAAAGCGCTCAGGCTATTTGCACCTTTGG CTACTGCGACGGTGTGGATGCCGAGCCTCTAATCTTTAAGGGCATCACCG AGGGCGTTATCGTCGAACCTCGCGGCCCCCGGGACTTTGGATGGGATCCG GTTTTCCAGCCCAGTGGCTACGATAAGACCTACGCCGAACTGCCCAAGTC CGAGAAGAACACCATTTCCCATCGCTACCGCGCTTTAGCTCTACTGCGGC AGCACTTCGAGAAACAGGACAAGTTAATAAACTAGGACTCAATTTAATTT AATTATTCAATTCAATTATTTAAACATCGCATATTTGTTCTACATTGTCG AGAAGTTGTTGCAACCTAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 4977875..4978187 | 544..232 | 1565 | 100 | Minus |
chr2L | 23010047 | chr2L | 4978244..4978477 | 234..1 | 1170 | 100 | Minus |
chr2L | 23010047 | chr2L | 4977584..4977808 | 767..543 | 1125 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 4978775..4979087 | 544..232 | 1565 | 100 | Minus |
2L | 23513712 | 2L | 4979144..4979377 | 234..1 | 1170 | 100 | Minus |
2L | 23513712 | 2L | 4978483..4978708 | 768..543 | 1130 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 4977584..4977807 | 544..767 | 100 | <- | Minus |
chr2L | 4977876..4978185 | 234..543 | 100 | <- | Minus |
chr2L | 4978245..4978477 | 1..233 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8891-RA | 1..576 | 110..685 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8891-RA | 1..576 | 110..685 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8891-RA | 1..576 | 110..685 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8891-RA | 1..576 | 110..685 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8891-RA | 1..576 | 110..685 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8891-RA | 1..767 | 1..767 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8891-RA | 1..767 | 1..767 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8891-RA | 3..769 | 1..767 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8891-RA | 1..767 | 1..767 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8891-RA | 3..769 | 1..767 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4978776..4979085 | 234..543 | 100 | <- | Minus |
2L | 4979145..4979377 | 1..233 | 100 | Minus | |
2L | 4978484..4978707 | 544..767 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4978776..4979085 | 234..543 | 100 | <- | Minus |
2L | 4979145..4979377 | 1..233 | 100 | Minus | |
2L | 4978484..4978707 | 544..767 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4978776..4979085 | 234..543 | 100 | <- | Minus |
2L | 4979145..4979377 | 1..233 | 100 | Minus | |
2L | 4978484..4978707 | 544..767 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 4978484..4978707 | 544..767 | 100 | <- | Minus |
arm_2L | 4978776..4979085 | 234..543 | 100 | <- | Minus |
arm_2L | 4979145..4979377 | 1..233 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4978484..4978707 | 544..767 | 100 | <- | Minus |
2L | 4978776..4979085 | 234..543 | 100 | <- | Minus |
2L | 4979145..4979377 | 1..233 | 100 | Minus |
Translation from 109 to 684
> RE51791.hyp MSKPITFVTGNAKKLEELVAILGPSFPRTIVSKKIDLPELQGDIDEIAIK KCKEAARQVNGPVLVEDTSLCFNALEGLPGPYIKWFLEKLQPEGLHRLLH GWENKSAQAICTFGYCDGVDAEPLIFKGITEGVIVEPRGPRDFGWDPVFQ PSGYDKTYAELPKSEKNTISHRYRALALLRQHFEKQDKLIN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8891-PA | 191 | CG8891-PA | 1..191 | 1..191 | 1015 | 100 | Plus |
Translation from 109 to 684
> RE51791.pep MSKPITFVTGNAKKLEELVAILGPSFPRTIVSKKIDLPELQGDIDEIAIK KCKEAARQVNGPVLVEDTSLCFNALEGLPGPYIKWFLEKLQPEGLHRLLH GWENKSAQAICTFGYCDGVDAEPLIFKGITEGVIVEPRGPRDFGWDPVFQ PSGYDKTYAELPKSEKNTISHRYRALALLRQHFEKQDKLIN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14164-PA | 191 | GF14164-PA | 1..189 | 1..189 | 887 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24330-PA | 191 | GG24330-PA | 1..191 | 1..191 | 1006 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13806-PA | 187 | GH13806-PA | 1..184 | 1..184 | 841 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8891-PA | 191 | CG8891-PA | 1..191 | 1..191 | 1015 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18056-PA | 187 | GI18056-PA | 1..184 | 1..184 | 875 | 87 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26487-PA | 188 | GL26487-PA | 1..187 | 1..187 | 915 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21395-PA | 188 | GA21395-PA | 1..187 | 1..187 | 918 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18051-PA | 191 | GM18051-PA | 1..191 | 1..191 | 1013 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22671-PA | 191 | GD22671-PA | 1..191 | 1..191 | 1010 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22490-PA | 188 | GJ22490-PA | 1..186 | 1..186 | 855 | 82.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24597-PA | 187 | GK24597-PA | 1..187 | 1..187 | 872 | 85 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18710-PA | 191 | GE18710-PA | 1..191 | 1..191 | 994 | 97.4 | Plus |