Clone RE52086 Report

Gene	Date	Evidence
CG11638	2001-12-14	Blastp of sequenced clone
CG18819	2002-01-01	Sim4 clustering to Release 2
CG11638	2008-04-29	Release 5.5 accounting
CG11638	2008-08-15	Release 5.9 accounting
CG11638	2008-12-18	5.12 accounting

Clone Sequence Records

RE52086.complete Sequence

2478 bp (2478 high quality bases) assembled on 2001-12-14

GenBank Submission: AY071434

> RE52086.complete
AGTCAGTTCAGTTCATTCAGTCGGGCCATGAAGCAAAGCTCCGCGCATTG
TGGATTTGCGCGTGTCGAAAGGGGAAACAGCAAAAACGCCATTTTTTTCG
AGTAACGGTGCGTGCGTAATTTTATCCGTTATCTTTCCTCGACAAACATT
CGAACTGGGAAACAACAGGAATTCCATTTTTTCGAGTTAAGATACTAATC
GATTGGAATTGGGAATTTGCATATCCTTTATACCGAAAGCAGTCAGGAGG
ATTCTTTTCCGCCCCTGAATTCCCTGAAGCGGGAGGAAGGCCGCCACGTT
GGAAGGAAAACGGCTTTTCACGGCAGTTAATAAATTTTTAACTGGTTCAA
CAATTGCCCGCGAGTTTCGCCAACTAATGACGAGAAACGCGGCGGTGAGT
GGCGATGAACCCGACGAGGAGCAGGCGTCAGCGGTAGTCGCTGAAGGTGA
GGATCAGGAGACTCAAAACCAGGCGATGCAGGATGATGGGCAACCAGGAG
GCGAGGGCCACCACCTCAGCAGCGAAAAGCAACAATCGACAGAGCAGTGT
CGTCAGAGGCCGCGGAAAAAATTGACGGACAAGCAACCACAACGAAGTGC
TGCCAATTCGCATCCAGAGCAGGCGGATGCGGACACGGACTCCAGCTCCT
GCGAAGGCATTAAAGTGGGTCAGCGGAGGGGCACGCGGGTGAGCTACGCT
CAGAGAAACCTTCATGGGGCGGAGCTGGAGGACTACGACTACGATGGGGA
AGGGGAGGGGGAGCGGGAGGAAGATGGGGAGGAGGAAGAAGAGGAGGAAG
AATCCTACGACGACTACGAACAGTCCTCGAAACCGGAGGGACGTCGACCT
TCTGCCCGAACCGCCTTGAGCGTCCGCAGCAGACGAAAGACGAAAACCCG
TCAAATTTGCTATGCATCCTCGGACTTGGAGCTGGGAATTGGCGACGGAC
CCAACCTAATCGACGGCGAGACCCTGCATAAACGCCGCTGCATCTCCAAG
GGACAAATGCGGGAATTCCGGGAGGCCTTCCGGCTCTTTGACAAGGATGG
CGATGGCTGCATAACCAAAGAGGAGCTCGGCACAGTGATGCGGTCACTGG
GACAATTTGCCAGAGTAGAAGAGCTGCAGGAGATGTTGCAGGAGATCGAC
GTGGACGGGGACGGGAACGTCAGTTTTGAGGAGTTCGTTGATATCCTGTC
AAACATGACGTACGAGGATAAGTCAGGTCTATCCTCCGCCGATCAGGAGG
AGCGGGAACTACGCGACGCCTTCCGCGTCTTCGACAAGCACAACCGGGGA
TACATAACAGCCTCTGACTTGCGAGCCGTGCTGCAGTGTCTGGGCGAGGA
TCTCGACGAGGAGGACATTGAGGACATGATCAAGGAGGTGGACGTGGACG
GCGACGGGCGCATTGACTTCTACGAGTTTGTCCACGCATTGGGAGAACCG
GAGGACTCGCAGGAGAACGACGACGAGGATGTGGACACCACATCGCCGCT
GCCCACACCGAAATCGGCCATTTCCCTAAGCTACGATTGAGGCTACCCGA
GTTCGCTCTATGTGCATGTTGATTGTCGAGAGAGGAATCCAAAGTTTGAA
TAATATATTAAATAGCTTAAATTAAAAAACACGAACCGATACAGATGTTC
ACCAATAATCGAACGGCAAAGATTCGATATGTATGTATGTATTTTTATCA
ATATTTTTCAACTACTAAGCCATAGTTAGTGATGCAATATACGTGCCCAA
TTTTTCGCCGAAAGTAAAACAAAGCAGCATTAAAAAGATAACGGTTCTTC
TCAGGAACTGAATAACAAAACCTGAACAAAAAACAATAACATTGATAGAT
TTTCGTGCAATGAGAAAATATTATGTAGCGCGTCATAAGATTAGCGCCCC
TGCATAGCTCCGTTTCTTCTTATGTTCTGTATTTAAATACAAATCTAGAA
ACAACAAACTGTATTCCATATAAACTTTTCATTTATAGAATTGTTCATCT
TTAAAGGGAAAAAAAATGGAAAAAATTTCCAAACCTCTCGCTAAAACAGT
TTTCTAAATATTTCACATCTAAATAAAGGGGCGCTAACCTGGTGACGCGC
AGTGTATGTCTATATATATATATATTTCTATATATGTATAGAGCTATTGA
ATAATCGAATACAACAAATTAACCGACAAACGATTTACTTTACATCGATC
TTTACGGGAAACTAACTAACTCCAATTTTAAATCGCTGTCTTTACCTATT
CACCAAAGTCCAAATAAAAATCAAAAGTAATCTTAGTGCGATAAATATAA
CTTACCAAATATATTATATCCGTGGACTTATCCAACTTAGAAGCACAAAT
ACACATATTTCAAGACATATCATTGAAGACGCCTCTGTAAATGTGTTTTT
TAAATCCAACTGATATATATTTAAATATACTTATACTTGTCAATCTATCC
GTGAGTTCCTCCAAAAAAAAAAAAAAAA

RE52086.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:43:41

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
CG11638-RA	2651	CG11638-RA	31..2490	2..2460	12260	99.9	Plus
nc_21270.a	736	nc_21270.a	1..188	5..192	940	100	Plus
RpS3A.a	1720	RpS3A.a	1569..1644	1806..1730	285	93.5	Minus

Blast to d_melanogaster_OreR.fa performed 2019-03-16 03:37:20

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chrX	22417052	chrX	907957..909050	2460..1368	5405	99.8	Minus
chrX	22417052	chrX	909439..910218	1158..379	3870	99.7	Minus
chrX	22417052	chrX	909111..909321	1367..1157	1055	100	Minus
chrX	22417052	chrX	920498..920687	191..2	950	100	Minus
chrX	22417052	chrX	910490..910679	379..190	950	100	Minus
chr3L	24539361	chr3L	23331272..23331347	1731..1806	335	96.1	Plus
chr3L	24539361	chr3L	22454101..22454175	1732..1806	315	94.7	Plus
chrX	22417052	chrX	22287619..22287752	2073..1930	295	81.9	Minus
chr2L	23010047	chr2L	22237574..22237659	1930..2015	295	89.5	Plus
chr2L	23010047	chr2L	22963671..22963743	1806..1734	290	93.2	Minus
chr2R	21145070	chr2R	1405267..1405351	1930..2014	290	89.4	Plus
chr2R	21145070	chr2R	1200207..1200278	1730..1801	285	93.1	Plus
chr3L	24539361	chr3L	23259436..23259503	1806..1739	280	94.1	Minus
chr4	1351717	chr4	85619..85694	1730..1806	275	93.5	Plus
chr2L	23010047	chr2L	21370799..21370875	1806..1730	265	89.6	Minus
chrXHet	204175	chrXHet	17864..17937	1730..1803	265	90.5	Plus
chr3R	27901430	chr3R	153269..153345	1730..1806	265	89.6	Plus
chr2R	21145070	chr2R	129216..129300	1930..2014	260	87.1	Plus
chr3L	24539361	chr3L	23132355..23132429	2015..1941	255	89.3	Minus
chr3R	27901430	chr3R	388486..388578	2012..1920	255	84.9	Minus
chr3R	27901430	chr3R	152204..152283	2015..1936	250	87.5	Minus
chr3L	24539361	chr3L	22453585..22453667	2015..1930	245	88.4	Minus
chr2L	23010047	chr2L	22875932..22876016	2014..1930	245	85.9	Minus
chr2L	23010047	chr2L	22877354..22877411	1935..1878	245	94.8	Minus
chrYHet	347003	chrYHet	68173..68247	1806..1732	240	88	Minus
chr4	1351717	chr4	965811..965869	1806..1748	235	93.2	Minus
chr2L	23010047	chr2L	22608989..22609061	2002..1930	230	87.7	Minus
chr3R	27901430	chr3R	557946..558000	1995..1941	230	94.5	Minus
chr3LHet	2555433	chr3LHet	1190077..1190145	1730..1798	225	88.4	Plus
chr2L	23010047	chr2L	22196411..22196496	1930..2015	220	83.7	Plus
chr2L	23010047	chr2L	21370665..21370722	1878..1934	210	94.8	Plus
chrX	22417052	chrX	20895217..20895281	1933..1997	205	87.7	Plus
chr3L	24539361	chr3L	23331384..23331423	1823..1862	200	100	Plus
chr2L	23010047	chr2L	22877230..22877275	1761..1806	200	95.7	Plus
chr2L	23010047	chr2L	22963594..22963633	1862..1823	200	100	Minus
chr2R	21145070	chr2R	1242434..1242473	1862..1823	200	100	Minus
chr3LHet	2555433	chr3LHet	2472691..2472736	1870..1825	200	95.7	Minus
chr3L	24539361	chr3L	22454259..22454316	1934..1878	195	93.1	Minus
chr2L	23010047	chr2L	21370718..21370765	1870..1823	195	93.8	Minus
chr2L	23010047	chr2L	22327026..22327073	1870..1823	195	93.8	Minus
chr4	1351717	chr4	966205..966279	1923..1997	195	84	Plus
chr3LHet	2555433	chr3LHet	1190190..1190237	1823..1870	195	93.8	Plus
chr3LHet	2555433	chr3LHet	1190233..1190290	1934..1878	195	93.1	Minus
chr3LHet	2555433	chr3LHet	2481773..2481830	1934..1878	195	93.1	Minus

Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:01:19 has no hits.

Blast to na_all.dmel.RELEASE6 performed 2019-03-16 03:37:18

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
X	23542271	X	1013986..1015079	2460..1368	5420	99.9	Minus
X	23542271	X	1015468..1016247	1158..379	3900	100	Minus
X	23542271	X	1015140..1015350	1367..1157	1055	100	Minus
X	23542271	X	1016521..1016710	379..190	950	100	Minus
X	23542271	X	1026514..1026703	191..2	950	100	Minus
3L	28110227	3L	23342356..23342431	1731..1806	335	96.1	Plus
3L	28110227	3L	22465193..22465267	1732..1806	315	94.7	Plus
2R	25286936	2R	5312832..5312903	1730..1801	300	94.4	Plus
X	23542271	X	22891626..22891759	2073..1930	295	81.9	Minus
2L	23513712	2L	22239043..22239128	1930..2015	295	89.5	Plus
2R	25286936	2R	5517916..5518000	1930..2014	290	89.4	Plus
2L	23513712	2L	23072436..23072508	1806..1734	290	93.2	Minus
3L	28110227	3L	23270516..23270583	1806..1739	280	94.1	Minus
4	1348131	4	64984..65059	1730..1806	275	93.5	Plus
X	23542271	X	23039044..23039117	1730..1803	265	90.5	Plus
2L	23513712	2L	21372283..21372359	1806..1730	265	89.6	Minus
3R	32079331	3R	4327549..4327625	1730..1806	265	89.6	Plus
2R	25286936	2R	4241675..4241759	1930..2014	260	87.1	Plus
3L	28110227	3L	23143424..23143498	2015..1941	255	89.3	Minus
3R	32079331	3R	4562768..4562860	2012..1920	255	84.9	Minus
3R	32079331	3R	4326484..4326563	2015..1936	250	87.5	Minus
3L	28110227	3L	22464677..22464759	2015..1930	245	88.4	Minus
2L	23513712	2L	22984693..22984777	2014..1930	245	85.9	Minus
2L	23513712	2L	22986115..22986172	1935..1878	245	94.8	Minus
Y	3667352	Y	583963..584037	1806..1732	240	88	Minus
4	1348131	4	945294..945352	1806..1748	235	93.2	Minus
2L	23513712	2L	22717759..22717831	2002..1930	230	87.7	Minus
3R	32079331	3R	4732237..4732291	1995..1941	230	94.5	Minus
3L	28110227	3L	25807411..25807479	1730..1798	225	88.4	Plus
2L	23513712	2L	22197883..22197968	1930..2015	220	83.7	Plus
2L	23513712	2L	21372149..21372206	1878..1934	210	94.8	Plus
X	23542271	X	21030060..21030124	1933..1997	205	87.7	Plus
3L	28110227	3L	23342468..23342507	1823..1862	200	100	Plus
3L	28110227	3L	27349764..27349809	1870..1825	200	95.7	Minus
2R	25286936	2R	5355015..5355054	1862..1823	200	100	Minus
2L	23513712	2L	22985991..22986036	1761..1806	200	95.7	Plus
2L	23513712	2L	23072359..23072398	1862..1823	200	100	Minus
3L	28110227	3L	22465351..22465408	1934..1878	195	93.1	Minus
3L	28110227	3L	25807524..25807571	1823..1870	195	93.8	Plus
3L	28110227	3L	25807567..25807624	1934..1878	195	93.1	Minus
3L	28110227	3L	27358847..27358904	1934..1878	195	93.1	Minus
2L	23513712	2L	21372202..21372249	1870..1823	195	93.8	Minus
2L	23513712	2L	22328529..22328576	1870..1823	195	93.8	Minus
4	1348131	4	945688..945762	1923..1997	195	84	Plus

Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:10:30

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
X	23527363	X	1022084..1023177	2460..1368	5430	99.9	Minus
X	23527363	X	1023566..1024345	1158..379	3900	100	Minus
X	23527363	X	1023238..1023448	1367..1157	1055	100	Minus
X	23527363	X	1024619..1024808	379..190	950	100	Minus
X	23527363	X	1034612..1034801	191..2	950	100	Minus
3L	28103327	3L	23335456..23335531	1731..1806	335	96	Plus
3L	28103327	3L	22458293..22458367	1732..1806	315	94.6	Plus
2R	25260384	2R	5314031..5314102	1730..1801	300	94.4	Plus
2L	23513712	2L	22239043..22239128	1930..2015	295	89.5	Plus
X	23527363	X	22876767..22876851	2014..1930	290	89.4	Minus
2L	23513712	2L	23072436..23072508	1806..1734	290	93.1	Minus
2R	25260384	2R	5519115..5519199	1930..2014	290	89.4	Plus
4	1331231	4	64984..65059	1730..1806	285	93.5	Plus
3L	28103327	3L	23263616..23263683	1806..1739	280	94.1	Minus
X	23527363	X	23024136..23024209	1730..1803	265	90.5	Plus
2L	23513712	2L	21372283..21372359	1806..1730	265	89.6	Minus
3R	31820162	3R	4068380..4068456	1730..1806	265	89.6	Plus
2R	25260384	2R	4242874..4242958	1930..2014	260	87	Plus
3L	28103327	3L	22457777..22457859	2015..1930	255	88.3	Minus
3L	28103327	3L	23136524..23136598	2015..1941	255	89.3	Minus
3R	31820162	3R	4303599..4303691	2012..1920	255	84.9	Minus
3R	31820162	3R	4067315..4067394	2015..1936	250	87.5	Minus
2L	23513712	2L	22986115..22986172	1935..1878	245	94.8	Minus
2L	23513712	2L	22984693..22984777	2014..1930	245	85.8	Minus
Y	3410481	Y	561777..561851	1806..1732	240	88	Minus
3R	31820162	3R	4473068..4473142	1995..1920	235	89.4	Minus
4	1331231	4	945294..945352	1806..1748	235	93.2	Minus
2L	23513712	2L	22717759..22717831	2002..1930	230	87.6	Minus
3L	28103327	3L	25800511..25800579	1730..1798	225	88.4	Plus
2L	23513712	2L	21372149..21372206	1878..1934	220	94.8	Plus
2L	23513712	2L	22197883..22197968	1930..2015	220	83.7	Plus
X	23527363	X	21015152..21015216	1933..1997	205	87.6	Plus
3L	28103327	3L	22458451..22458508	1934..1878	205	93.1	Minus
3L	28103327	3L	27351947..27352004	1934..1878	205	93.1	Minus
3L	28103327	3L	25800667..25800724	1934..1878	205	93.1	Minus
3L	28103327	3L	23335568..23335607	1823..1862	200	100	Plus
3L	28103327	3L	27342864..27342909	1870..1825	200	95.6	Minus
2L	23513712	2L	22985991..22986036	1761..1806	200	95.6	Plus
2L	23513712	2L	23072359..23072398	1862..1823	200	100	Minus
2R	25260384	2R	5356214..5356253	1862..1823	200	100	Minus
3L	28103327	3L	25800624..25800671	1823..1870	195	93.7	Plus
2L	23513712	2L	21372202..21372249	1870..1823	195	93.7	Minus
2L	23513712	2L	22328529..22328576	1870..1823	195	93.7	Minus
4	1331231	4	945688..945762	1923..1997	195	84	Plus
3L	28103327	3L	22458408..22458455	1823..1870	180	91.6	Plus
3L	28103327	3L	24201936..24201983	1823..1870	180	91.6	Plus
3L	28103327	3L	24201646..24201699	1753..1806	180	88.8	Plus
3L	28103327	3L	23263533..23263580	1870..1823	180	91.6	Minus
3L	28103327	3L	27342948..27342992	1806..1762	180	93.3	Minus
2L	23513712	2L	22986075..22986112	1825..1862	175	97.3	Plus
X	23527363	X	22876718..22876774	2073..2018	170	89.4	Minus
4	1331231	4	945766..945820	2015..2069	170	87.2	Plus
3L	28103327	3L	27274379..27274417	2023..2061	165	94.8	Plus
3L	28103327	3L	23136432..23136463	2107..2076	160	100	Minus
3L	28103327	3L	26368436..26368485	2069..2020	160	88	Minus
2L	23513712	2L	22984649..22984700	2069..2018	155	86.5	Minus
2L	23513712	2L	22328660..22328693	1769..1736	155	97	Minus
X	23527363	X	1033916..1033969	182..129	150	85.1	Minus
3L	28103327	3L	27348322..27348381	2015..1956	150	83.3	Minus
3L	28103327	3L	26368389..26368421	2108..2076	150	96.9	Minus
2L	23513712	2L	22328615..22328653	1804..1766	150	92.3	Minus
3L	28103327	3L	27274332..27274381	1966..2015	145	86	Plus
3L	28103327	3L	22457679..22457713	2115..2081	145	94.2	Minus
2L	23513712	2L	22239123..22239169	2020..2066	145	87.2	Plus
3R	31820162	3R	4303518..4303549	2107..2076	145	96.8	Minus
X	23527363	X	23024248..23024287	1823..1862	140	90	Plus

Blast to na_te.dros performed on 2019-03-16 03:37:18 has no hits.

RE52086.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 03:37:58 Download gff for RE52086.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chrX	907955..909050	1368..2462	99	<-	Minus
chrX	909111..909320	1158..1367	100	<-	Minus
chrX	909440..910217	380..1157	99	<-	Minus
chrX	910490..910677	192..379	100	<-	Minus
chrX	920498..920687	1..191	99		Minus

Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:44:17 Download gff for RE52086.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG11638-RA	1..1164	377..1540	100		Plus

Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:10:01 Download gff for RE52086.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG11638-RA	1..1164	377..1540	100		Plus

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:47:27 Download gff for RE52086.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG11638-RA	1..1164	377..1540	100		Plus

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:34:11 Download gff for RE52086.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG11638-RA	1..1164	377..1540	100		Plus

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:10:21 Download gff for RE52086.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG11638-RA	1..1164	377..1540	100		Plus

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:44:17 Download gff for RE52086.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG11638-RA	1..2460	2..2462	99		Plus

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:10:00 Download gff for RE52086.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG11638-RA	1..2460	2..2462	99		Plus

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:47:27 Download gff for RE52086.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG11638-RA	1..2460	2..2462	99		Plus

Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:34:12 Download gff for RE52086.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG11638-RA	1..2460	2..2462	99		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:10:21 Download gff for RE52086.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG11638-RA	1..2460	2..2462	99		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:37:58 Download gff for RE52086.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	1013984..1015079	1368..2462	99	<-	Minus
X	1015140..1015349	1158..1367	100	<-	Minus
X	1015469..1016246	380..1157	100	<-	Minus
X	1016521..1016708	192..379	100	<-	Minus
X	1026514..1026703	1..191	99		Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:37:58 Download gff for RE52086.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	1013984..1015079	1368..2462	99	<-	Minus
X	1015140..1015349	1158..1367	100	<-	Minus
X	1015469..1016246	380..1157	100	<-	Minus
X	1016521..1016708	192..379	100	<-	Minus
X	1026514..1026703	1..191	99		Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:37:58 Download gff for RE52086.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	1013984..1015079	1368..2462	99	<-	Minus
X	1015140..1015349	1158..1367	100	<-	Minus
X	1015469..1016246	380..1157	100	<-	Minus
X	1016521..1016708	192..379	100	<-	Minus
X	1026514..1026703	1..191	99		Minus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:47:27 Download gff for RE52086.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_X	920547..920736	1..191	99		Minus
arm_X	909502..910279	380..1157	100	<-	Minus
arm_X	910554..910741	192..379	100	<-	Minus
arm_X	908017..909112	1368..2462	99	<-	Minus
arm_X	909173..909382	1158..1367	100	<-	Minus

Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:11:21 Download gff for RE52086.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	1022082..1023177	1368..2462	99	<-	Minus
X	1023238..1023447	1158..1367	100	<-	Minus
X	1023567..1024344	380..1157	100	<-	Minus
X	1024619..1024806	192..379	100	<-	Minus
X	1034612..1034801	1..191	99		Minus

RE52086.pep Sequence

Translation from 376 to 1539

> RE52086.pep
MTRNAAVSGDEPDEEQASAVVAEGEDQETQNQAMQDDGQPGGEGHHLSSE
KQQSTEQCRQRPRKKLTDKQPQRSAANSHPEQADADTDSSSCEGIKVGQR
RGTRVSYAQRNLHGAELEDYDYDGEGEGEREEDGEEEEEEEESYDDYEQS
SKPEGRRPSARTALSVRSRRKTKTRQICYASSDLELGIGDGPNLIDGETL
HKRRCISKGQMREFREAFRLFDKDGDGCITKEELGTVMRSLGQFARVEEL
QEMLQEIDVDGDGNVSFEEFVDILSNMTYEDKSGLSSADQEERELRDAFR
VFDKHNRGYITASDLRAVLQCLGEDLDEEDIEDMIKEVDVDGDGRIDFYE
FVHALGEPEDSQENDDEDVDTTSPLPTPKSAISLSYD*

RE52086.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 21:09:47

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dana\GF22040-PA	385	GF22040-PA	1..385	1..387	1105	68	Plus
Dana\GF12835-PA	149	GF12835-PA	5..146	206..355	370	48.7	Plus
Dana\GF16772-PA	148	GF16772-PA	4..147	206..357	306	42.8	Plus
Dana\GF13647-PA	148	GF13647-PA	12..145	214..355	259	38	Plus
Dana\GF14383-PA	143	GF14383-PA	1..140	211..355	226	35.2	Plus
Dana\GF12835-PA	149	GF12835-PA	62..148	187..276	176	43.3	Plus
Dana\GF12835-PA	149	GF12835-PA	12..74	294..356	145	44.4	Plus

Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 21:09:48

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG12723-PA	332	GG12723-PA	1..332	1..387	1264	74.4	Plus
Dere\GG20265-PA	149	GG20265-PA	5..146	206..355	370	48.7	Plus
Dere\GG11425-PA	148	GG11425-PA	4..147	206..357	278	38.8	Plus
Dere\GG24968-PA	148	GG24968-PA	12..145	214..355	270	44.1	Plus
Dere\GG23316-PA	148	GG23316-PA	15..145	217..355	256	38.1	Plus
Dere\GG20265-PA	149	GG20265-PA	62..148	187..276	176	43.3	Plus
Dere\GG11425-PA	148	GG11425-PA	52..146	188..275	172	44.2	Plus
Dere\GG23316-PA	148	GG23316-PA	84..146	213..275	154	47.6	Plus
Dere\GG20265-PA	149	GG20265-PA	12..74	294..356	145	44.4	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 21:09:49

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH12737-PA	413	GH12737-PA	1..413	1..387	1050	62.7	Plus
Dgri\GH23405-PA	151	GH23405-PA	7..148	206..355	332	45.3	Plus
Dgri\GH22800-PA	122	GH22800-PA	8..104	206..310	253	50.5	Plus
Dgri\GH21304-PA	151	GH21304-PA	12..149	210..355	233	36.3	Plus
Dgri\GH21731-PA	152	GH21731-PA	3..147	206..355	233	36	Plus
Dgri\GH21304-PA	151	GH21304-PA	29..147	155..272	158	34.5	Plus
Dgri\GH23405-PA	151	GH23405-PA	87..149	213..275	148	47.6	Plus
Dgri\GH22800-PA	122	GH22800-PA	15..77	294..356	143	44.4	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:20:24

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
CG11638-PA	387	CG11638-PA	1..387	1..387	2010	100	Plus
Cam-PD	149	CG8472-PD	5..143	206..352	380	49.7	Plus
Cam-PC	149	CG8472-PC	5..143	206..352	380	49.7	Plus
Cam-PE	149	CG8472-PE	5..143	206..352	380	49.7	Plus
Cam-PB	149	CG8472-PB	5..143	206..352	380	49.7	Plus
Cam-PA	149	CG8472-PA	5..143	206..352	380	49.7	Plus
CG31960-PA	148	CG31960-PA	13..145	215..355	319	42.6	Plus
Acam-PB	148	CG17769-PB	4..147	206..357	296	38.8	Plus
Acam-PA	148	CG17769-PA	4..147	206..357	296	38.8	Plus
azot-PA	148	CG11165-PA	14..145	216..355	277	37.1	Plus
TpnC41C-PB	154	CG2981-PB	5..154	206..360	259	34.8	Plus
TpnC41C-PA	154	CG2981-PA	5..154	206..360	259	34.8	Plus
CG30378-PA	148	CG30378-PA	5..146	206..355	256	34	Plus
TpnC47D-PB	155	CG9073-PB	12..152	210..355	249	34.9	Plus
TpnC47D-PA	155	CG9073-PA	12..152	210..355	249	34.9	Plus
TpnC25D-PC	149	CG6514-PC	6..146	210..355	247	34.2	Plus
TpnC25D-PA	149	CG6514-PA	6..146	210..355	247	34.2	Plus
TpnC4-PB	153	CG12408-PB	8..151	208..355	247	33.3	Plus
TpnC4-PA	153	CG12408-PA	8..151	208..355	247	33.3	Plus
TpnC25D-PB	143	CG6514-PB	5..140	215..355	246	34.8	Plus
TpnC73F-PC	155	CG7930-PC	12..152	210..355	244	33.6	Plus
TpnC73F-PA	155	CG7930-PA	12..152	210..355	244	33.6	Plus
CG17493-PD	182	CG17493-PD	35..176	206..355	231	33.3	Plus
CG17493-PC	182	CG17493-PC	35..176	206..355	231	33.3	Plus
CG17493-PB	182	CG17493-PB	35..176	206..355	231	33.3	Plus
Eip63F-1-PD	166	CG15855-PD	9..165	210..355	224	31.2	Plus
Eip63F-1-PC	181	CG15855-PC	16..180	202..355	223	29.1	Plus
Eip63F-1-PA	193	CG15855-PA	28..192	202..355	223	29.1	Plus
CG17770-PA	164	CG17770-PA	20..161	206..355	218	33.1	Plus
Eip63F-1-PB	161	CG15855-PB	9..160	215..355	211	30.9	Plus
CG31802-PA	186	CG31802-PA	39..180	206..355	203	31.3	Plus
CG13898-PA	151	CG13898-PA	8..148	206..354	202	30.9	Plus
Mlc-c-PA	147	CG3201-PA	5..141	207..352	201	34.2	Plus
CG5024-PB	165	CG5024-PB	25..164	210..357	200	30.9	Plus
CG5024-PA	165	CG5024-PA	25..164	210..357	200	30.9	Plus
Mlc-c-PB	153	CG3201-PB	15..147	211..352	196	34.5	Plus
CG13526-PA	154	CG13526-PA	16..153	213..358	196	28.1	Plus
Cam-PD	149	CG8472-PD	59..148	190..276	183	44.4	Plus
Cam-PC	149	CG8472-PC	59..148	190..276	183	44.4	Plus
Cam-PE	149	CG8472-PE	59..148	190..276	183	44.4	Plus
Cam-PB	149	CG8472-PB	59..148	190..276	183	44.4	Plus
Cam-PA	149	CG8472-PA	59..148	190..276	183	44.4	Plus
Mlc2-PA	222	CG2184-PA	73..219	207..363	176	29.7	Plus
sqh-PE	174	CG3595-PE	30..164	208..355	174	29.1	Plus
sqh-PD	174	CG3595-PD	30..164	208..355	174	29.1	Plus
sqh-PC	174	CG3595-PC	30..164	208..355	174	29.1	Plus
sqh-PB	174	CG3595-PB	30..164	208..355	174	29.1	Plus
sqh-PA	174	CG3595-PA	30..164	208..355	174	29.1	Plus
Acam-PB	148	CG17769-PB	6..146	137..275	173	36.3	Plus
Acam-PA	148	CG17769-PA	6..146	137..275	173	36.3	Plus
CG17272-PA	149	CG17272-PA	3..138	204..352	167	30.2	Plus
CanB-PB	170	CG4209-PB	19..161	210..359	160	28.4	Plus
CanB-PA	170	CG4209-PA	19..161	210..359	160	28.4	Plus
Cam-PD	149	CG8472-PD	7..85	289..367	156	36.7	Plus
Cam-PC	149	CG8472-PC	7..85	289..367	156	36.7	Plus
Cam-PE	149	CG8472-PE	7..85	289..367	156	36.7	Plus
Cam-PB	149	CG8472-PB	7..85	289..367	156	36.7	Plus
Cam-PA	149	CG8472-PA	7..85	289..367	156	36.7	Plus
azot-PA	148	CG11165-PA	84..146	213..275	156	47.6	Plus
CG31960-PA	148	CG31960-PA	74..146	203..275	151	38.4	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 21:09:49

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI14994-PA	109	GI14994-PA	1..109	277..387	478	93.7	Plus
Dmoj\GI20594-PA	149	GI20594-PA	5..146	206..355	370	48.7	Plus
Dmoj\GI10339-PA	149	GI10339-PA	5..146	206..355	314	43.3	Plus
Dmoj\GI10340-PA	150	GI10340-PA	6..147	206..355	289	40.7	Plus
Dmoj\GI19794-PA	151	GI19794-PA	8..149	206..355	264	38.7	Plus
Dmoj\GI20594-PA	149	GI20594-PA	62..148	187..276	176	43.3	Plus
Dmoj\GI10339-PA	149	GI10339-PA	85..147	213..275	153	49.2	Plus
Dmoj\GI10340-PA	150	GI10340-PA	86..148	213..275	148	47.6	Plus
Dmoj\GI14994-PA	109	GI14994-PA	17..79	212..274	146	47.6	Plus
Dmoj\GI20594-PA	149	GI20594-PA	12..74	294..356	145	44.4	Plus
Dmoj\GI19794-PA	151	GI19794-PA	85..151	210..276	144	41.8	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 21:09:50

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\GL14408-PA	374	GL14408-PA	1..374	1..387	872	62.3	Plus
Dper\GL10814-PA	149	GL10814-PA	5..146	206..355	370	48.7	Plus
Dper\GL21536-PA	148	GL21536-PA	4..147	206..357	324	42.8	Plus
Dper\GL11701-PA	148	GL11701-PA	14..145	216..355	320	46.4	Plus
Dper\GL21535-PA	148	GL21535-PA	4..147	206..357	317	43.4	Plus
Dper\GL10814-PA	149	GL10814-PA	62..148	187..276	176	43.3	Plus
Dper\GL11701-PA	148	GL11701-PA	84..146	213..275	154	46	Plus
Dper\GL10814-PA	149	GL10814-PA	12..74	294..356	145	44.4	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 21:09:51

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\GA11114-PA	386	GA11114-PA	1..386	1..387	1026	68.2	Plus
Dpse\GA24499-PA	149	GA24499-PA	5..146	206..355	370	48.7	Plus
Dpse\GA26322-PA	148	GA26322-PA	4..147	206..357	324	42.8	Plus
Dpse\GA10810-PA	148	GA10810-PA	14..145	216..355	317	45.7	Plus
Dpse\GA14657-PA	148	GA14657-PA	4..147	206..357	317	43.4	Plus
Dpse\GA24499-PA	149	GA24499-PA	62..148	187..276	176	43.3	Plus
Dpse\GA10810-PA	148	GA10810-PA	84..146	213..275	154	46	Plus
Dpse\GA24499-PA	149	GA24499-PA	12..74	294..356	145	44.4	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 21:09:52

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\GM19002-PA	389	GM19002-PA	1..389	1..387	1906	95.6	Plus
Dsec\GM21351-PA	149	GM21351-PA	5..146	206..355	370	48.7	Plus
Dsec\GM10265-PA	148	GM10265-PA	4..147	206..357	282	38.8	Plus
Dsec\GM18437-PA	148	GM18437-PA	12..145	214..355	270	40.8	Plus
Dsec\GM20994-PA	148	GM20994-PA	14..145	216..355	256	37.1	Plus
Dsec\GM21351-PA	149	GM21351-PA	62..148	187..276	176	43.3	Plus
Dsec\GM20994-PA	148	GM20994-PA	84..146	213..275	155	49.2	Plus
Dsec\GM21351-PA	149	GM21351-PA	12..74	294..356	145	44.4	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 21:09:53

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\GD16030-PA	243	GD16030-PA	1..231	34..264	948	91.3	Plus
Dsim\GD10849-PA	149	GD10849-PA	5..146	206..355	370	48.7	Plus
Dsim\GD21235-PA	148	GD21235-PA	4..147	206..357	282	38.8	Plus
Dsim\GD23255-PA	148	GD23255-PA	12..145	214..355	270	40.8	Plus
Dsim\GD10523-PA	148	GD10523-PA	14..145	216..355	255	36.4	Plus
Dsim\GD10849-PA	149	GD10849-PA	62..148	187..276	176	43.3	Plus
Dsim\GD10523-PA	148	GD10523-PA	84..146	213..275	155	47.6	Plus
Dsim\GD10849-PA	149	GD10849-PA	12..74	294..356	145	44.4	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 21:09:54

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\GJ15350-PA	416	GJ15350-PA	1..416	1..387	1054	62	Plus
Dvir\GJ10193-PA	151	GJ10193-PA	11..148	210..355	321	43.8	Plus
Dvir\GJ11809-PA	147	GJ11809-PA	7..144	210..355	268	39.5	Plus
Dvir\GJ20779-PA	113	GJ20779-PA	1..110	238..355	257	44.1	Plus
Dvir\GJ15117-PA	152	GJ15117-PA	9..150	206..355	252	38.7	Plus
Dvir\GJ20779-PA	113	GJ20779-PA	26..112	187..276	176	43.3	Plus
Dvir\GJ10193-PA	151	GJ10193-PA	87..149	213..275	153	49.2	Plus
Dvir\GJ15117-PA	152	GJ15117-PA	6..82	284..360	152	40.3	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 21:09:55

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK10165-PA	439	GK10165-PA	142..439	101..387	980	71.7	Plus
Dwil\GK22183-PA	149	GK22183-PA	5..146	206..355	370	48.7	Plus
Dwil\GK18988-PA	148	GK18988-PA	4..145	206..355	332	44.7	Plus
Dwil\GK19414-PA	148	GK19414-PA	8..142	210..352	271	40.6	Plus
Dwil\GK21975-PA	147	GK21975-PA	4..145	206..355	270	39.3	Plus
Dwil\GK22183-PA	149	GK22183-PA	62..148	187..276	176	43.3	Plus
Dwil\GK22183-PA	149	GK22183-PA	12..74	294..356	145	44.4	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 21:09:55

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\GE16550-PA	348	GE16550-PA	1..348	34..387	1464	88.1	Plus
Dyak\Cam-PA	149	GE12425-PA	5..146	206..355	370	48.7	Plus
Dyak\GE23620-PA	148	GE23620-PA	4..147	206..357	283	39.5	Plus
Dyak\GE18259-PA	148	GE18259-PA	12..145	214..355	275	42.7	Plus
Dyak\GE19161-PA	148	GE19161-PA	15..145	217..355	249	36	Plus
Dyak\Cam-PA	149	GE12425-PA	62..148	187..276	176	43.3	Plus
Dyak\GE23620-PA	148	GE23620-PA	52..146	188..275	167	43.2	Plus
Dyak\GE19161-PA	148	GE19161-PA	84..146	213..275	157	49.2	Plus
Dyak\Cam-PA	149	GE12425-PA	12..74	294..356	145	44.4	Plus

RE52086.hyp Sequence

Translation from 376 to 1539

> RE52086.hyp
MTRNAAVSGDEPDEEQASAVVAEGEDQETQNQAMQDDGQPGGEGHHLSSE
KQQSTEQCRQRPRKKLTDKQPQRSAANSHPEQADADTDSSSCEGIKVGQR
RGTRVSYAQRNLHGAELEDYDYDGEGEGEREEDGEEEEEEEESYDDYEQS
SKPEGRRPSARTALSVRSRRKTKTRQICYASSDLELGIGDGPNLIDGETL
HKRRCISKGQMREFREAFRLFDKDGDGCITKEELGTVMRSLGQFARVEEL
QEMLQEIDVDGDGNVSFEEFVDILSNMTYEDKSGLSSADQEERELRDAFR
VFDKHNRGYITASDLRAVLQCLGEDLDEEDIEDMIKEVDVDGDGRIDFYE
FVHALGEPEDSQENDDEDVDTTSPLPTPKSAISLSYD*

RE52086.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:40:57

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
CG11638-PA	387	CG11638-PA	1..387	1..387	2010	100	Plus
Cam-PD	149	CG8472-PD	5..143	206..352	380	49.7	Plus
Cam-PC	149	CG8472-PC	5..143	206..352	380	49.7	Plus
Cam-PE	149	CG8472-PE	5..143	206..352	380	49.7	Plus
Cam-PB	149	CG8472-PB	5..143	206..352	380	49.7	Plus
Cam-PD	149	CG8472-PD	59..148	190..276	183	44.4	Plus
Cam-PC	149	CG8472-PC	59..148	190..276	183	44.4	Plus
Cam-PE	149	CG8472-PE	59..148	190..276	183	44.4	Plus
Cam-PD	149	CG8472-PD	7..85	289..367	156	36.7	Plus
Cam-PC	149	CG8472-PC	7..85	289..367	156	36.7	Plus
Cam-PE	149	CG8472-PE	7..85	289..367	156	36.7	Plus

Library:	RE
Tissue Source:	Drosophila melanogaster embryo
Created by:	Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:	2000-10-23
Comments:	Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:	520
Well:	86
Vector:	pFlc-1
Associated Gene/Transcript	CG11638-RA
Protein status:	RE52086.pep: gold
Preliminary Size:	846
Sequenced Size:	2478

Clone RE52086 Report

Clone and Library Details

Associated Genes

Clone Sequence Records

RE52086.complete Sequence

RE52086.complete Blast Records

RE52086.complete Sim4 Records

RE52086.pep Sequence

RE52086.pep Blast Records

RE52086.hyp Sequence

RE52086.hyp Blast Records