BDGP Sequence Production Resources |
Search the DGRC for RE52151
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 521 |
Well: | 51 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG11190-RA |
Protein status: | RE52151.pep: gold |
Sequenced Size: | 2560 |
Gene | Date | Evidence |
---|---|---|
CG11190 | 2001-12-17 | Blastp of sequenced clone |
CG11190 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11190 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11190 | 2008-04-29 | Release 5.5 accounting |
CG11190 | 2008-08-15 | Release 5.9 accounting |
CG11190 | 2008-12-18 | 5.12 accounting |
2560 bp (2560 high quality bases) assembled on 2001-12-17
GenBank Submission: AY071437
> RE52151.complete ACTTTCCAGCCCTGGAAAAATACCAAGACATCTACCATCTCTCTAAAAAC GAAAACATCAAAGATTTACTACACCAAATTAAAATAAACTTATAAATCTT TGCAACCTTAAGTCCGTGGCAATTTCCATTTTGCATTTCCATATCCGGCT GGCCAAATAATTCCACGACATTTACGGATGTCGCGGTAACCTAAACACAA AAAAAATAAATAAATATAAATAAAATAAAATAAAATACATTAAAACGGAT CATCAGCTGTCGTTAGAACCGAAACGGACTAAGGGCGGAGGAACTGGCAC TGAACCTATGGGCCAGCATGTATCCGGTGGCGTTTGTCTTGCTGCTGCTG GTTGCACCTAATGCCGACGCGAATTTGGGACGCGATGACGAACGATTCCA CGAGGAGCTAGTGGTTCGTCCATTGTCCGGCGACCATGTCAACACCTACT TTCAGTTCACCACGCGCTGGCACTACGGCGAAAAGGATAATCTTTACCAC ACCCAATTGACGCCTCGAGTAATTGCGGAGCTGTTGCAGCAGTTTGCGGT AAAGGAGCTGCACATTGGCCTAACCCAGGGACTGTGGCGCTACGAGACAT GGGGCTATCCCATTGTGGAGGCCACCAGCGGTGCCGAGATGTGGGCGTGG TTCAGTGGCGCAAATTTGACCAACCGGGATGTGGATCGCCAGTGGAAGGA GTTGGCCAACGTTTTCTCGGGCGTGTTGTGCGCCTCGTTGAATTTCGTCG ACAATACGAATAGCATTGCACCGAGGCACTTGATTCGTCCACAATTTATG CCAGCCAATGGCCAAAGATTCGTTCGCTATGCCACATTGCCGCGTGAGAT CGTGTGCACGGAGAATCTGACGCCGTGGAAGAAACTACTGCCATGCGGTA GTGCCTCAGGCTTTGCCTCACTTCTCAACTCGGGACATGTACACAACACC AAATACCATTCGCTGGGCCTGAAGGTGCGCGTGCTCTGCGAGGATCACGA TGAGGACAATTGCATTGTGGAGCTGACGCAGACGGCCAACTTGGTCTACG ATCTCCGTCTGTTCGAATTGAGCAACAATGATTTCTCGCTGCGCCGCCTG TTCGGCATGGGACTGAATGGCTATTGTGAGCTGGCCGAGAGCTCCAAGAT CTATGTGCAGCGCAACGAGCTGGGCGAGCGCTATCAGCTGGTTCCAGAAC CCGTGCACGAAGTGAAGACCACTCGTGGTGGGCATAGTGTCGTCTATTCC GTCTACGATATGCACGAGCAGTTCAAAGAGGCCGGCGAACGGCTGTTTAA TGTCGCCTGGCTGGCGCCGAAGAGCGCAAATCGTCGTCGCAATTTGGCGA AGCCATCACTGCCACCGGTGACGGTTCATCGTTATCTATTGGGACACGGC CAGGAGCGTGGCAGGATCGTTACGGAGGTGACGAACTCGCACTACGACGC CCTGCCCATAATGCTGCAGGAGGTGATACCGTGGTATGTGCACGCCTATT TGCACACCCTTTCCATACGTCGCAAGCCGCAGCGGGTCAACGAATACGGA GGCCAGCGATTGACCTTCAAGCTGCTCCACTATACGCCCGGCAAGCAGAG GGAACTGCCGTCCCATTTGGAAATTGGCTTCATGCTGCCCGGCCAGACAT CGGCGCTGATAAGCATCGATGTGGATTATTTGCTGCTCAAATGGTTGGAG TATCCGCCGGATGCGAATCACGGCCATTACATCGGCTCGGCCATTGTGTC CAGCCAACTGCCGATGGGCAGAAACTATACCGCTCTGCCGCCGGAGGGGC ATCTCTTTGAGCATTCGTTCAATGCCACACGTCCGAGTTATGTTCTCAGT TTGCACACGGAAGCGCTGATTGTCTCACTGCCCACGCCGGACTTTAGCAT GCCGTACAATGTGATCTGTCTCGCATGCACAGTGGTTGCCCTGGCCTTTG GACCCATACACAGTGTGGCCACCAAGATGATCATTGTCGGTCGTCAGACA TCGGCGCCGAAGAATTTTGTTAAGAAGATCTTCAATCAGCTTTTCCGGCG CGGCAAGGCCACCGATGAGACAGCTGCCGAGGGCGAAGGATTGCCAGCGG CAGGAGCAGCAGCAACTGGAGTTGCATCGGGGAGAGCAGCGATATCGCCA GGCAGTCCATCGGGCGACCAGCCGCTGCTGGAAGATCTCGACGAGGAGGA GGAGGAGGAGCAGGACTAGGAGGTGATACAAAAAAACAGCCATCGGGAGT CGTGATAAGCTCCCACTGATAGTATACCCTTACAATTCCAATAAAGTATA TTCACAAGGATACCAAACTGGGTTGCAATTCTCGATTTTTAAGTTATTTC AATTTATTTCGGGGGTTTTCAAAAACAGTATTTTCAGTTATTTTGCTAAG AAAAATCAAAGAAATCGCCATGGGATTTCTATATATATTGTAGATGAAAT ATGTATAAACAATGTAAGAATGAGAATTGCAAAGTATACTTTTAGCTTTT TAGAAAGCTAACCAAATTTGTAACGAAATAAACAAAGTGAAAATACAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11190-RA | 2555 | CG11190-RA | 10..2553 | 1..2544 | 12720 | 100 | Plus |
Paf-AHalpha.a | 1433 | Paf-AHalpha.a | 29..86 | 1..58 | 290 | 100 | Plus |
Paf-AHalpha.d | 1503 | Paf-AHalpha.d | 99..156 | 1..58 | 290 | 100 | Plus |
Paf-AHalpha.a | 1433 | Paf-AHalpha.a | 109..176 | 62..129 | 250 | 91.1 | Plus |
Paf-AHalpha.d | 1503 | Paf-AHalpha.d | 179..246 | 62..129 | 250 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 8296283..8298333 | 2544..493 | 10045 | 99.4 | Minus |
chrX | 22417052 | chrX | 8298542..8299033 | 492..1 | 2445 | 99.8 | Minus |
chrX | 22417052 | chrX | 15675289..15675436 | 129..1 | 315 | 82.4 | Minus |
chr2L | 23010047 | chr2L | 21152582..21152639 | 1..58 | 260 | 96.6 | Plus |
chr2L | 23010047 | chr2L | 20899448..20899504 | 206..150 | 255 | 96.5 | Minus |
chr2R | 21145070 | chr2R | 5646827..5646972 | 71..225 | 230 | 78.1 | Plus |
chrX | 22417052 | chrX | 16676423..16676480 | 206..150 | 225 | 96.6 | Minus |
chrX | 22417052 | chrX | 16676618..16676673 | 58..3 | 220 | 92.9 | Minus |
chr2L | 23010047 | chr2L | 22886266..22886312 | 3..49 | 205 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 8404535..8406586 | 2544..493 | 10260 | 100 | Minus |
X | 23542271 | X | 8406795..8407286 | 492..1 | 2460 | 100 | Minus |
X | 23542271 | X | 15785425..15785572 | 129..1 | 315 | 82.4 | Minus |
2L | 23513712 | 2L | 21154077..21154134 | 1..58 | 260 | 96.6 | Plus |
2L | 23513712 | 2L | 20900913..20900969 | 206..150 | 255 | 96.5 | Minus |
2R | 25286936 | 2R | 9759390..9759535 | 71..225 | 230 | 78.1 | Plus |
X | 23542271 | X | 16786789..16786846 | 206..150 | 225 | 96.6 | Minus |
X | 23542271 | X | 16786984..16787039 | 58..3 | 220 | 92.9 | Minus |
2L | 23513712 | 2L | 22995027..22995073 | 3..49 | 205 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 8412633..8414684 | 2544..493 | 10260 | 100 | Minus |
X | 23527363 | X | 8414893..8415384 | 492..1 | 2460 | 100 | Minus |
X | 23527363 | X | 15793613..15793670 | 58..1 | 290 | 100 | Minus |
2L | 23513712 | 2L | 21154077..21154134 | 1..58 | 260 | 96.5 | Plus |
2L | 23513712 | 2L | 20900913..20900969 | 206..150 | 255 | 96.4 | Minus |
X | 23527363 | X | 15793523..15793590 | 129..62 | 250 | 91.1 | Minus |
X | 23527363 | X | 16794887..16794944 | 206..150 | 235 | 96.5 | Minus |
X | 23527363 | X | 16795082..16795137 | 58..3 | 220 | 92.8 | Minus |
2R | 25260384 | 2R | 9760589..9760646 | 71..128 | 215 | 91.3 | Plus |
2L | 23513712 | 2L | 22995027..22995073 | 3..49 | 205 | 95.7 | Plus |
2R | 25260384 | 2R | 9760659..9760734 | 150..225 | 185 | 82.8 | Plus |
2L | 23513712 | 2L | 21154150..21154203 | 56..109 | 180 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmir\spock | 4952 | Dmir\spock SPOCK 4952bp Derived from AY144571. | 4776..4947 | 53..219 | 211 | 63.5 | Plus |
TART-A | 13424 | TART-A 13424bp | 8585..8720 | 2044..2178 | 118 | 60 | Plus |
Dyak\HeT-A | 5691 | Dyak\HeT-A YAKHETA 5691bp | 227..285 | 37..96 | 117 | 68.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2755..2886 | 2020..2146 | 115 | 58.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 8296281..8298333 | 493..2546 | 97 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11190-RA | 1..1902 | 318..2219 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11190-RA | 1..1902 | 318..2219 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11190-RA | 1..1902 | 318..2219 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11190-RA | 1..1902 | 318..2219 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11190-RA | 1..1902 | 318..2219 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11190-RA | 1..2542 | 1..2542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11190-RA | 1..2542 | 1..2542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11190-RA | 1..2521 | 24..2544 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11190-RA | 1..2542 | 1..2542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11190-RA | 1..2521 | 24..2544 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8404533..8406586 | 493..2546 | 99 | <- | Minus |
X | 8406795..8407286 | 1..492 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8404533..8406586 | 493..2546 | 99 | <- | Minus |
X | 8406795..8407286 | 1..492 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8404533..8406586 | 493..2546 | 99 | <- | Minus |
X | 8406795..8407286 | 1..492 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 8298566..8300619 | 493..2546 | 99 | <- | Minus |
arm_X | 8300828..8301319 | 1..492 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8412631..8414684 | 493..2546 | 99 | <- | Minus |
X | 8414893..8415384 | 1..492 | 100 | Minus |
Translation from 317 to 2218
> RE52151.pep MYPVAFVLLLLVAPNADANLGRDDERFHEELVVRPLSGDHVNTYFQFTTR WHYGEKDNLYHTQLTPRVIAELLQQFAVKELHIGLTQGLWRYETWGYPIV EATSGAEMWAWFSGANLTNRDVDRQWKELANVFSGVLCASLNFVDNTNSI APRHLIRPQFMPANGQRFVRYATLPREIVCTENLTPWKKLLPCGSASGFA SLLNSGHVHNTKYHSLGLKVRVLCEDHDEDNCIVELTQTANLVYDLRLFE LSNNDFSLRRLFGMGLNGYCELAESSKIYVQRNELGERYQLVPEPVHEVK TTRGGHSVVYSVYDMHEQFKEAGERLFNVAWLAPKSANRRRNLAKPSLPP VTVHRYLLGHGQERGRIVTEVTNSHYDALPIMLQEVIPWYVHAYLHTLSI RRKPQRVNEYGGQRLTFKLLHYTPGKQRELPSHLEIGFMLPGQTSALISI DVDYLLLKWLEYPPDANHGHYIGSAIVSSQLPMGRNYTALPPEGHLFEHS FNATRPSYVLSLHTEALIVSLPTPDFSMPYNVICLACTVVALAFGPIHSV ATKMIIVGRQTSAPKNFVKKIFNQLFRRGKATDETAAEGEGLPAAGAAAT GVASGRAAISPGSPSGDQPLLEDLDEEEEEEQD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21840-PA | 654 | GF21840-PA | 38..602 | 14..578 | 2711 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17968-PA | 629 | GG17968-PA | 1..616 | 1..619 | 3049 | 93.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12887-PA | 635 | GH12887-PA | 36..601 | 24..586 | 2348 | 74.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PIG-T-PA | 633 | CG11190-PA | 1..633 | 1..633 | 3356 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14441-PA | 594 | GI14441-PA | 29..583 | 22..578 | 2255 | 73.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16569-PA | 642 | GL16569-PA | 9..590 | 7..590 | 2504 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10827-PA | 642 | GA10827-PA | 6..603 | 8..618 | 2507 | 76.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21409-PA | 635 | GM21409-PA | 1..634 | 1..631 | 3296 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16119-PA | 597 | GD16119-PA | 21..584 | 59..619 | 2767 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18779-PA | 633 | GJ18779-PA | 32..610 | 24..631 | 2326 | 70.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16308-PA | 624 | GK16308-PA | 14..616 | 7..602 | 2331 | 71.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17459-PA | 638 | GE17459-PA | 4..625 | 1..619 | 3055 | 94.5 | Plus |
Translation from 317 to 2218
> RE52151.hyp MYPVAFVLLLLVAPNADANLGRDDERFHEELVVRPLSGDHVNTYFQFTTR WHYGEKDNLYHTQLTPRVIAELLQQFAVKELHIGLTQGLWRYETWGYPIV EATSGAEMWAWFSGANLTNRDVDRQWKELANVFSGVLCASLNFVDNTNSI APRHLIRPQFMPANGQRFVRYATLPREIVCTENLTPWKKLLPCGSASGFA SLLNSGHVHNTKYHSLGLKVRVLCEDHDEDNCIVELTQTANLVYDLRLFE LSNNDFSLRRLFGMGLNGYCELAESSKIYVQRNELGERYQLVPEPVHEVK TTRGGHSVVYSVYDMHEQFKEAGERLFNVAWLAPKSANRRRNLAKPSLPP VTVHRYLLGHGQERGRIVTEVTNSHYDALPIMLQEVIPWYVHAYLHTLSI RRKPQRVNEYGGQRLTFKLLHYTPGKQRELPSHLEIGFMLPGQTSALISI DVDYLLLKWLEYPPDANHGHYIGSAIVSSQLPMGRNYTALPPEGHLFEHS FNATRPSYVLSLHTEALIVSLPTPDFSMPYNVICLACTVVALAFGPIHSV ATKMIIVGRQTSAPKNFVKKIFNQLFRRGKATDETAAEGEGLPAAGAAAT GVASGRAAISPGSPSGDQPLLEDLDEEEEEEQD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11190-PA | 633 | CG11190-PA | 1..633 | 1..633 | 3356 | 100 | Plus |