Clone RE52190 Report

Gene	Date	Evidence
CG12094	2002-01-01	Sim4 clustering to Release 2
CG12094	2003-01-01	Sim4 clustering to Release 3
CG12094	2003-01-22	Blastp of sequenced clone
CG34104	2008-04-29	Release 5.5 accounting
CG34104	2008-08-15	Release 5.9 accounting
CG34104	2008-12-18	5.12 accounting

Clone Sequence Records

RE52190.complete Sequence

2623 bp (2623 high quality bases) assembled on 2003-01-22

GenBank Submission: AY075502

> RE52190.complete
TGTATCTTGTTTTCGCGATCGGCGATCGTTTCGTTCGTTTGGGTTAGGTT
GTTATTTCGTTGTTATCCGTCGGTTTCTTTTAGCGGAGTTTGTTTTCGTT
GGTTTCGTTCTGTTTTCATTCTTTTTTTCTGTGCCGTGTGAGTTGCGCGC
ACGCGCAACCAACAAAATTGCTAAATAAAGAAATTCAAACGTTGCAAGTG
GCAGCGTTTCTCGACGTCAACGGCGACGCAGCGCAGGCGCAGCAGCAGCA
GAACAACGAATCAAATGGAATTGGATTTCGCCCCAATGAGCAGTTAATTG
GAATTACGTTCGACTGGAAGTGAGTGCAACAAGGAAACCCCTTCACTTTC
GAACTCTATCGACAACGCAAACTGGTGGAAAATTGTGGCAAACTTGTGTC
GTCATCGCCATCGTCGTCGTTCTCCCCAGCCAACTGTCATTGTCTTTGGC
ATTGGGCAACATTTTAATTGAAAAAGTTTTGCCAACTCTGGCACGCAGGA
GAGATGACTGTGAAATTGGCCAAGCTGTTTGGGGGCGTGACAACGGGTGG
CATTGAGATTCTGGACTCCCCGGGCAATCCGCAACAGCATCAGGAGCAAC
AGCATCTGCAGCAACAGCAACAGCAACCACTAACAGCACCGCAACAACAT
ATGCAACAGCAACCACCACCTCTGCCGCCACCAAATGCGAATATGAAGAG
TCTCAAGTATTATGAGCACCTGCAGGCCACCTACGACTGTCACGATCTGA
TGGATCATGACCAGGATCAGGATGACTACGAGGACACCTGTATGCAGCGC
AACCATCCGTATAACAATTCGCAGAGACCGCTTTTGGGCGACAGGCGACC
GCAACTCACTGTGATGAGTGTGGGTAAAAAGGGTGCAAAGTCTGGGATGC
AAGTGCAGAATCTGCCACCATTGCCGCCACTAAGGACATACATCTCACCA
TATGTGCAGCAACAGAAACGGGATAGCGCGAAGGGATTGCATGGATTCAA
TGACTTCGATGCCCTGTCCCAGCAATATAATCAACACCTTCAGAGTCCAC
ACATTGGCTATCCCTATGGCAGTCCACCGTCGCCAACGGCTCAATCCAGT
GATTTTTGCTTTGATCGCCAAACTGGTTTGGTCATGCTGCCCGGCACCGC
GGGTGGCCAGGTCAGCTCGAGCAGTTCGAGCAACTGCAGCAGTTCGCACA
CCACGTCCACCTCCTCGCCCACTAGATATTATCCGGATAATCCCGGTCAT
GCCACTGGTCTTTTTGCCTCCCGCTTCGAGGATGACTTTTGCATGCGTCG
TCCTGCCGTCCAGGAAAGTTCATCGCCCATCATTGCCGGTGGTTGTGGAG
GCGGAACAGGATCAGGATCAGGAGTGGCACTAGGAGTAGGTGGAGGACCC
TTCATCTTTGGCATTGCACCGGAGCAGCAGGTCACGGATTATGGAAGCAA
CCCACTGCCACCAACTCCTCCGCAGCTGAAACAACAATCTGTGATTAGTC
GAAGCCCACTGCAACAATCGCTGAGCGACACAAGTGCCGCCAGCAGTGGC
AAGGGCTCCAAATTCTTATTGCGTAAGCGTAAATCAAAGAAGACAACCGC
AGCAGCCGCAGCAACAACGGAGGCCGCAACAACGGCCAAAAAGGATGGCA
AAAAGGCTATTGCCCAGCCACAGCCTTCGATCAAGTGCGTCCTGGTGGGC
GACGGAGCCGTGGGCAAGACGAATCTGATATTATCGTATCTGGAGAATCG
CTTCAATCCGGAGCACATACCCACGGCATCAGACATTTATAATGTGTAAA
CTCTATAAAGAGCGCTTACCCTTCGTCACTCTCCTGAGCATCATTCAAAT
CATTTTCGCCTGCGTTTAAATATGAATGTTCTTTGCACACATGGGAGGTG
GCGGTAAAGTGGGTGGAAAATGGCAGGAGTTTCACCAGCACAGCGCTTTA
CTAATTCACTTGCTAGCTTGTCTGCATTGTCGATGCTCCGCGCCCCCTTA
CTTTCCCATTTTCATTTCCCCAACGCTTTTCCAGCTCAGTTCCATTGGTG
GTGGGAGAAATGACATCAATGCAATGTTGAATGTAATTAAACCGATGTTA
TTACTGAGCAGCAAAACGAATGTTTATTAACTGGTGATGGATTCAAATGC
TCAGTTTGATTGAGTTGTAGTATGTGCCTATGCAATATTAAGAACAATTA
AATAAAATAGCATATTAACTTATGGCAGCACTTTGTTGCTATGTTTATGT
TTATGTTTATGCACGCAGTTAGGCCAGGGCAGATGTAACATGATCACCCA
CTCGAAGGCAAAAAGTATAAGTGCATGGTCAGCATTCACACGCCGACCAA
ATACATATTACATACGTACATACATATCTCGCTCTCCCGATAAGCCTAGA
TATATAAGATATACATAAGAACGCCGCTCCGCTGCTGGCGTACCCGGCAG
CGCAGCTACGCGGATTAGCCTAAGTCAAAATATATAAAAAACTGTAAAAT
CGGGGAGACTCGGTAGACGTTGAGCTGACAGAACCATTTCTGCCTACTCA
AAAATCAAAAGAAGAAATTGAATAAATATATGTCAGCCCGACGGCTGCCT
TCAACTTAAAAAAAAAAAAAAAA

RE52190.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:24:03

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
CG34104.a	3269	CG34104.a	2..2612	2..2611	13015	99.9	Plus
CG34104-RA	2612	CG34104-RA	2..2612	2..2611	13015	99.9	Plus
CG34104-RB	2686	CG34104-RB	5..1798	2..1794	8930	99.9	Plus

Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:34:33

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chrX	22417052	chrX	10013713..10014861	363..1511	5670	99.6	Plus
chrX	22417052	chrX	10029524..10030339	1794..2607	4000	99.6	Plus
chrX	22417052	chrX	10036854..10037299	2162..2607	2215	99.8	Plus
chr3R	27901430	chr3R	11425891..11426336	2607..2162	2155	98.9	Minus
chr3L	24539361	chr3L	17506601..17507046	2607..2162	2155	98.9	Minus
chr3R	27901430	chr3R	11432874..11433315	2607..2166	2150	99.1	Minus
chr3L	24539361	chr3L	17513621..17514062	2607..2166	2150	99.1	Minus
chr3L	24539361	chr3L	19809750..19810195	2607..2162	2140	98.7	Minus
chr2RHet	3288813	chr2RHet	2576118..2576563	2607..2162	2140	98.7	Minus
chr2R	21145070	chr2R	19416009..19416454	2607..2162	2140	98.7	Minus
chr3L	24539361	chr3L	4328173..4328614	2166..2607	2135	98.9	Plus
chr3L	24539361	chr3L	19816775..19817216	2607..2166	2135	98.9	Minus
chr2RHet	3288813	chr2RHet	2583127..2583568	2607..2166	2135	98.9	Minus
chr2R	21145070	chr2R	19423047..19423488	2607..2166	2135	98.9	Minus
chr3R	27901430	chr3R	10927207..10927652	2607..2162	2125	98.4	Minus
chr3L	24539361	chr3L	4335129..4335574	2162..2607	2125	98.4	Plus
chr3L	24539361	chr3L	9532680..9533125	2162..2607	2125	98.4	Plus
chr2R	21145070	chr2R	20063347..20063792	2607..2162	2125	98.4	Minus
chr3R	27901430	chr3R	10933924..10934365	2607..2166	2120	98.6	Minus
chr3L	24539361	chr3L	9525662..9526103	2166..2607	2120	98.6	Plus
chrX	22417052	chrX	19031838..19032283	2162..2607	2110	98.2	Plus
chr2R	21145070	chr2R	20533574..20534019	2607..2162	2110	98.2	Minus
chrU	10048995	chrU	9549346..9549792	2162..2607	2110	98.7	Plus
chrX	22417052	chrX	19025461..19025902	2166..2607	2105	98.4	Plus
chr2R	21145070	chr2R	20540593..20541034	2607..2166	2105	98.4	Minus
chrU	10048995	chrU	5977657..5978098	2607..2166	2105	98.4	Minus
chr3L	24539361	chr3L	21239828..21240274	2162..2607	2080	98.2	Plus
chr3L	24539361	chr3L	21232808..21233250	2166..2607	2075	98.4	Plus
chr2R	21145070	chr2R	20070293..20070734	2607..2167	2070	98.4	Minus
chr3L	24539361	chr3L	1226264..1226710	2162..2607	2065	98	Plus
chr3L	24539361	chr3L	1219159..1219600	2167..2607	2055	98.2	Plus
chr2R	21145070	chr2R	20033163..20033609	2606..2162	2050	97.8	Minus
chr2R	21145070	chr2R	20040201..20040644	2606..2165	2050	98	Minus
chrX	22417052	chrX	445506..445951	2164..2607	2045	97.8	Plus
chr3L	24539361	chr3L	20579130..20579572	2166..2607	2045	98	Plus
chrX	22417052	chrX	452526..452973	2162..2607	2040	97.5	Plus
chrU	10048995	chrU	9890597..9891039	2607..2166	2015	97.5	Minus
chr3R	27901430	chr3R	13340671..13341117	2162..2607	2005	97.1	Plus
chr3R	27901430	chr3R	13333666..13334108	2166..2607	2000	97.3	Plus
chrX	22417052	chrX	21506440..21506887	2607..2162	1990	97.3	Minus
chrX	22417052	chrX	21513494..21513937	2607..2166	1985	97.5	Minus
chrX	22417052	chrX	5417312..5417758	2165..2607	1950	97.3	Plus
chrX	22417052	chrX	5420630..5421079	2162..2607	1950	97.1	Plus
chrU	10048995	chrU	923391..923840	2607..2162	1905	96.4	Minus
chrU	10048995	chrU	930400..930846	2607..2165	1905	96.6	Minus
chrU	10048995	chrU	9917628..9918069	2607..2171	1865	96.4	Minus
chr3L	24539361	chr3L	9122459..9122769	2607..2297	1510	99	Minus
chr3R	27901430	chr3R	22963742..22964052	2297..2607	1495	98.7	Plus
chr3R	27901430	chr3R	22970781..22971091	2297..2607	1495	98.7	Plus
chr3R	27901430	chr3R	26198283..26198593	2297..2607	1495	98.7	Plus
chr3R	27901430	chr3R	26205337..26205647	2297..2607	1495	98.7	Plus
chr3L	24539361	chr3L	9069068..9069378	2297..2607	1495	98.7	Plus
chr3L	24539361	chr3L	9076057..9076367	2297..2607	1495	98.7	Plus
chrU	10048995	chrU	9409695..9410005	2297..2607	1495	98.7	Plus
chrX	22417052	chrX	3880350..3880660	2607..2297	1480	98.4	Minus
chrX	22417052	chrX	3887412..3887722	2607..2297	1480	98.4	Minus
chr2R	21145070	chr2R	19800436..19800746	2607..2297	1465	98.1	Minus
chr2R	21145070	chr2R	19807489..19807799	2607..2297	1465	98.1	Minus
chrX	22417052	chrX	189944..190254	2607..2297	1450	97.7	Minus
chrX	22417052	chrX	197002..197312	2607..2297	1450	97.7	Minus
chr3L	24539361	chr3L	11555917..11556227	2297..2607	1450	97.7	Plus
chr3L	24539361	chr3L	11562970..11563280	2297..2607	1450	97.7	Plus
chrX	22417052	chrX	927555..927868	2297..2607	1410	98.1	Plus
chrX	22417052	chrX	934614..934927	2297..2607	1410	98.1	Plus
chr3L	24539361	chr3L	1047176..1047490	2607..2297	1335	97.1	Minus
chr3L	24539361	chr3L	1054324..1054638	2607..2297	1335	97.1	Minus
chrX	22417052	chrX	9978192..9978449	2..258	1225	99.2	Plus
chrU	10048995	chrU	5098574..5098889	2485..2166	810	86.3	Minus
chrU	10048995	chrU	5172260..5172553	2198..2493	755	85.9	Plus
chrU	10048995	chrU	9409531..9409692	2166..2326	745	98.8	Plus
chrX	22417052	chrX	934446..934611	2162..2326	735	97.6	Plus
chrX	22417052	chrX	3880663..3880828	2326..2162	735	97.6	Minus
chrX	22417052	chrX	190257..190422	2326..2162	735	97.6	Minus
chr3R	27901430	chr3R	22970613..22970778	2162..2326	735	97.6	Plus
chr3R	27901430	chr3R	26205169..26205334	2162..2326	735	97.6	Plus
chr3L	24539361	chr3L	1047493..1047658	2326..2162	735	97.6	Minus
chr3L	24539361	chr3L	1054641..1054803	2326..2165	735	98.2	Minus
chr3L	24539361	chr3L	9075889..9076054	2162..2326	735	97.6	Plus
chr3L	24539361	chr3L	11562802..11562967	2162..2326	735	97.6	Plus
chr2R	21145070	chr2R	19800749..19800914	2326..2162	735	97.6	Minus
chr2R	21145070	chr2R	19807802..19807964	2326..2165	735	98.2	Minus
chrX	22417052	chrX	927391..927552	2166..2326	730	98.1	Plus
chrX	22417052	chrX	3887725..3887886	2326..2166	730	98.1	Minus
chrX	22417052	chrX	10025611..10025756	1511..1656	730	100	Plus
chr3R	27901430	chr3R	26198119..26198280	2166..2326	730	98.1	Plus
chr3R	27901430	chr3R	22963578..22963739	2166..2326	730	98.1	Plus
chr3L	24539361	chr3L	9068904..9069065	2166..2326	730	98.1	Plus
chr3L	24539361	chr3L	11555753..11555914	2166..2326	730	98.1	Plus
chr2RHet	3288813	chr2RHet	3023295..3023613	2166..2485	725	84.5	Plus
chr2RHet	3288813	chr2RHet	3031263..3031581	2166..2485	725	84.5	Plus
chr2RHet	3288813	chr2RHet	3047205..3047523	2166..2485	725	84.5	Plus
chrX	22417052	chrX	197315..197477	2326..2165	720	97.5	Minus
chr3RHet	2517486	chr3RHet	205686..206006	2485..2164	720	84.3	Minus
chr2RHet	3288813	chr2RHet	3039237..3039555	2166..2485	710	84.2	Plus
chrX	22417052	chrX	10026045..10026183	1656..1794	695	100	Plus
chr3RHet	2517486	chr3RHet	197214..197544	2485..2158	690	83.9	Minus
chr2LHet	368865	chr2LHet	278577..278858	2199..2485	630	84.4	Plus
chr3L	24539361	chr3L	24259513..24259821	2166..2485	615	83	Plus
chr3L	24539361	chr3L	9122772..9122931	2326..2162	610	94	Minus
chr2RHet	3288813	chr2RHet	545230..545434	2485..2278	540	86.1	Minus
chrU	10048995	chrU	1000231..1000482	2166..2425	540	84	Plus
chrU	10048995	chrU	826444..826763	2162..2485	515	80.5	Plus
chr2RHet	3288813	chr2RHet	800372..800581	2166..2372	495	85.7	Plus
chrU	10048995	chrU	681985..682204	2162..2372	405	83.2	Plus
chr2LHet	368865	chr2LHet	284288..284455	2162..2326	405	86.9	Plus
chr2R	21145070	chr2R	4349396..4349630	2413..2166	345	80.5	Minus
chrX	22417052	chrX	9979000..9979066	258..324	335	100	Plus
chrU	10048995	chrU	676317..676391	2411..2485	270	90.7	Plus
chrX	22417052	chrX	9998130..9998169	323..362	200	100	Plus
chrU	10048995	chrU	671713..671773	2372..2312	200	88.5	Minus

Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:01:27 has no hits.

Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:34:31

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
X	23542271	X	10122056..10123204	363..1511	5745	100	Plus
X	23542271	X	10137898..10138715	1794..2611	4090	100	Plus
X	23542271	X	10145226..10145675	2162..2611	2235	99.8	Plus
3R	32079331	3R	15601254..15601704	2612..2162	2180	98.9	Minus
3R	32079331	3R	15608237..15608683	2612..2166	2175	99.1	Minus
3L	28110227	3L	17517070..17517519	2611..2162	2175	98.9	Minus
3L	28110227	3L	17524090..17524535	2611..2166	2170	99.1	Minus
3L	28110227	3L	19820376..19820825	2611..2162	2160	98.7	Minus
2R	25286936	2R	3694521..3694970	2611..2162	2160	98.7	Minus
2R	25286936	2R	23529664..23530113	2611..2162	2160	98.7	Minus
3L	28110227	3L	4328787..4329232	2166..2611	2155	98.9	Plus
3L	28110227	3L	19827401..19827846	2611..2166	2155	98.9	Minus
2R	25286936	2R	3701530..3701975	2611..2166	2155	98.9	Minus
2R	25286936	2R	23536702..23537147	2611..2166	2155	98.9	Minus
3R	32079331	3R	15102588..15103037	2611..2162	2145	98.4	Minus
3L	28110227	3L	4335743..4336192	2162..2611	2145	98.4	Plus
3L	28110227	3L	9540826..9541275	2162..2611	2145	98.4	Plus
2R	25286936	2R	24177326..24177775	2611..2162	2145	98.4	Minus
3R	32079331	3R	15109305..15109750	2611..2166	2140	98.7	Minus
3L	28110227	3L	9533808..9534253	2166..2611	2140	98.7	Plus
X	23542271	X	19142984..19143433	2162..2611	2130	98.2	Plus
3L	28110227	3L	26077754..26078203	2611..2162	2130	98.2	Minus
2R	25286936	2R	24647679..24648128	2611..2162	2130	98.2	Minus
Ymm	880023	Ymm	595895..596345	2162..2611	2130	98.7	Plus
X	23542271	X	19136607..19137052	2166..2611	2125	98.4	Plus
3L	28110227	3L	26084520..26084965	2611..2166	2125	98.4	Minus
2R	25286936	2R	24654698..24655143	2611..2166	2125	98.4	Minus
3L	28110227	3L	21250820..21251270	2162..2611	2100	98.2	Plus
3L	28110227	3L	21243800..21244246	2166..2611	2095	98.4	Plus
2R	25286936	2R	24184272..24184718	2611..2166	2095	98.4	Minus
3L	28110227	3L	1226752..1227202	2162..2611	2085	98	Plus
3L	28110227	3L	1219647..1220092	2167..2611	2075	98.2	Plus
3R	32079331	3R	1456708..1457152	2605..2162	2070	98.2	Minus
X	23542271	X	551475..551924	2164..2611	2065	97.8	Plus
3L	28110227	3L	20590119..20590565	2166..2611	2065	98	Plus
X	23542271	X	558495..558946	2162..2611	2060	97.6	Plus
2R	25286936	2R	24147158..24147609	2611..2162	2060	97.6	Minus
2R	25286936	2R	24154196..24154644	2611..2165	2060	97.8	Minus
U	3151297	U	1606150..1606596	2611..2166	2035	97.5	Minus
3R	32079331	3R	17516281..17516731	2162..2611	2025	97.1	Plus
3R	32079331	3R	17509276..17509722	2166..2611	2020	97.3	Plus
X	23542271	X	21641278..21641729	2611..2162	2010	97.3	Minus
X	23542271	X	21648332..21648779	2611..2166	2005	97.5	Minus
X	23542271	X	5524895..5525345	2165..2611	1970	97.3	Plus
X	23542271	X	5528213..5528666	2162..2611	1970	97.1	Plus
3R	32079331	3R	3129062..3129515	2611..2162	1925	96.5	Minus
3R	32079331	3R	3136071..3136521	2611..2165	1925	96.7	Minus
U	3151297	U	1076667..1077112	2611..2171	1885	96.4	Minus
3L	28110227	3L	9130643..9130957	2611..2297	1530	99	Minus
Ymm	880023	Ymm	517661..517977	2297..2613	1525	98.7	Plus
Y	3667352	Y	3436716..3437031	2612..2297	1520	98.7	Minus
Y	3667352	Y	3443768..3444083	2612..2297	1520	98.7	Minus
3R	32079331	3R	27140734..27141048	2297..2611	1515	98.7	Plus
3R	32079331	3R	27147773..27148087	2297..2611	1515	98.7	Plus
3R	32079331	3R	30375758..30376072	2297..2611	1515	98.7	Plus
3R	32079331	3R	30382812..30383126	2297..2611	1515	98.7	Plus
3L	28110227	3L	9077146..9077460	2297..2611	1515	98.7	Plus
3L	28110227	3L	9084135..9084449	2297..2611	1515	98.7	Plus
X	23542271	X	3986953..3987267	2611..2297	1500	98.4	Minus
X	23542271	X	3994015..3994329	2611..2297	1500	98.4	Minus
2R	25286936	2R	23914389..23914703	2611..2297	1485	98.1	Minus
2R	25286936	2R	23921442..23921756	2611..2297	1485	98.1	Minus
3L	28110227	3L	11565000..11565315	2297..2612	1475	97.8	Plus
3L	28110227	3L	11572053..11572368	2297..2612	1475	97.8	Plus
X	23542271	X	295939..296253	2611..2297	1470	97.8	Minus
X	23542271	X	302997..303311	2611..2297	1470	97.8	Minus
X	23542271	X	1033571..1033888	2297..2611	1430	98.1	Plus
X	23542271	X	1040630..1040947	2297..2611	1430	98.1	Plus
3L	28110227	3L	1047531..1047849	2611..2297	1355	97.2	Minus
3L	28110227	3L	1054679..1054997	2611..2297	1355	97.2	Minus
X	23542271	X	10086534..10086791	2..258	1240	99.6	Plus
U	3151297	U	276267..276582	2485..2166	810	86.3	Minus
Y	3667352	Y	257961..258254	2493..2198	755	85.9	Minus
Y	3667352	Y	273401..273694	2493..2198	755	85.9	Minus
Y	3667352	Y	3437034..3437199	2326..2162	750	98.2	Minus
Ymm	880023	Ymm	517497..517658	2166..2326	745	98.8	Plus
Y	3667352	Y	3444086..3444247	2326..2166	745	98.8	Minus
X	23542271	X	296256..296421	2326..2162	735	97.6	Minus
X	23542271	X	303314..303476	2326..2165	735	98.2	Minus
X	23542271	X	1040462..1040627	2162..2326	735	97.6	Plus
X	23542271	X	3987270..3987435	2326..2162	735	97.6	Minus
3R	32079331	3R	27147605..27147770	2162..2326	735	97.6	Plus
3R	32079331	3R	30382644..30382809	2162..2326	735	97.6	Plus
3L	28110227	3L	1047852..1048017	2326..2162	735	97.6	Minus
3L	28110227	3L	1055000..1055162	2326..2165	735	98.2	Minus
3L	28110227	3L	9083967..9084132	2162..2326	735	97.6	Plus
3L	28110227	3L	11571885..11572050	2162..2326	735	97.6	Plus
2R	25286936	2R	23914706..23914871	2326..2162	735	97.6	Minus
2R	25286936	2R	23921759..23921921	2326..2165	735	98.2	Minus
X	23542271	X	3994332..3994493	2326..2166	730	98.1	Minus
X	23542271	X	10133971..10134116	1511..1656	730	100	Plus
X	23542271	X	1033407..1033568	2166..2326	730	98.1	Plus
3R	32079331	3R	27140570..27140731	2166..2326	730	98.1	Plus
3R	32079331	3R	30375594..30375755	2166..2326	730	98.1	Plus
3L	28110227	3L	9076982..9077143	2166..2326	730	98.1	Plus
3L	28110227	3L	11564836..11564997	2166..2326	730	98.1	Plus
3L	28110227	3L	27684643..27684961	2485..2166	725	84.5	Minus
3L	28110227	3L	27701984..27702302	2485..2166	725	84.5	Minus
3L	28110227	3L	27709950..27710268	2485..2166	725	84.5	Minus
3R	32079331	3R	1228378..1228698	2164..2485	720	84.3	Plus
3L	28110227	3L	27692611..27692929	2485..2166	710	84.2	Minus
X	23542271	X	10134405..10134543	1656..1794	695	100	Plus
3R	32079331	3R	655796..656126	2485..2158	690	83.9	Minus
3R	32079331	3R	1236840..1237170	2158..2485	690	83.9	Plus
2L	23513712	2L	23423394..23423675	2199..2485	630	84.4	Plus
3L	28110227	3L	24270614..24270922	2166..2485	615	83	Plus
3L	28110227	3L	9130960..9131119	2326..2162	610	94	Minus
X	23542271	X	21949072..21949323	2425..2166	540	84	Minus
2R	25286936	2R	1418532..1418736	2485..2278	540	86.1	Minus
Y	3667352	Y	2342995..2343314	2162..2485	530	80.8	Plus
Y	3667352	Y	2075993..2076312	2485..2162	515	80.5	Minus
Y	3667352	Y	2196990..2197309	2485..2162	515	80.5	Minus
2R	25286936	2R	2057237..2057446	2166..2372	495	85.7	Plus
Y	3667352	Y	2260765..2260984	2162..2372	405	83.2	Plus
Y	3667352	Y	2279697..2279916	2372..2162	405	83.2	Minus
U	3151297	U	684835..685054	2162..2372	360	81.8	Plus
Y	3667352	Y	2234724..2234943	2372..2162	360	81.8	Minus
Y	3667352	Y	2305750..2305969	2162..2372	360	81.8	Plus
2L	23513712	2L	23429105..23429274	2162..2326	350	85.9	Plus
2R	25286936	2R	8461868..8462102	2413..2166	345	80.5	Minus
X	23542271	X	10087342..10087408	258..324	335	100	Plus
Y	3667352	Y	2255098..2255172	2411..2485	270	90.7	Plus
Y	3667352	Y	2285510..2285584	2485..2411	270	90.7	Minus
X	23542271	X	10106476..10106515	323..362	200	100	Plus
Y	3667352	Y	2250493..2250553	2372..2312	200	88.5	Minus
Y	3667352	Y	2290130..2290190	2312..2372	200	88.5	Plus

Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:01:54

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
X	23527363	X	10130154..10131302	363..1511	5745	100	Plus
X	23527363	X	10145996..10146813	1794..2611	4090	100	Plus
X	23527363	X	10153324..10153773	2162..2611	2235	99.7	Plus
3R	31820162	3R	15342085..15342535	2612..2162	2180	98.8	Minus
3L	28103327	3L	17510170..17510619	2611..2162	2175	98.8	Minus
3R	31820162	3R	15349068..15349514	2612..2166	2175	99.1	Minus
3L	28103327	3L	17517190..17517635	2611..2166	2170	99.1	Minus
3L	28103327	3L	19813476..19813925	2611..2162	2160	98.6	Minus
2R	25260384	2R	23530863..23531312	2611..2162	2160	98.6	Minus
2R	25260384	2R	3695720..3696169	2611..2162	2160	98.6	Minus
3L	28103327	3L	4328787..4329232	2166..2611	2155	98.8	Plus
3L	28103327	3L	19820501..19820946	2611..2166	2155	98.8	Minus
2R	25260384	2R	23537901..23538346	2611..2166	2155	98.8	Minus
2R	25260384	2R	3702729..3703174	2611..2166	2155	98.8	Minus
3L	28103327	3L	9533926..9534375	2162..2611	2145	98.4	Plus
3L	28103327	3L	4335743..4336192	2162..2611	2145	98.4	Plus
2R	25260384	2R	24178525..24178974	2611..2162	2145	98.4	Minus
3R	31820162	3R	14843419..14843868	2611..2162	2145	98.4	Minus
3L	28103327	3L	9526908..9527353	2166..2611	2140	98.6	Plus
3R	31820162	3R	14850136..14850581	2611..2166	2140	98.6	Minus
3L	28103327	3L	26070854..26071303	2611..2162	2130	98.2	Minus
X	23527363	X	19151082..19151531	2162..2611	2130	98.2	Plus
2R	25260384	2R	24648878..24649327	2611..2162	2130	98.2	Minus
3L	28103327	3L	26077620..26078065	2611..2166	2125	98.4	Minus
X	23527363	X	19144705..19145150	2166..2611	2125	98.4	Plus
2R	25260384	2R	24655897..24656342	2611..2166	2125	98.4	Minus
3L	28103327	3L	21243920..21244370	2162..2611	2110	98.2	Plus
3L	28103327	3L	21236900..21237346	2166..2611	2105	98.4	Plus
2R	25260384	2R	24185471..24185917	2611..2166	2105	98.4	Minus
3L	28103327	3L	1226752..1227202	2162..2611	2095	98	Plus
3L	28103327	3L	1219647..1220092	2167..2611	2085	98.2	Plus
3R	31820162	3R	1254286..1254730	2605..2162	2080	98.2	Minus
3L	28103327	3L	20583219..20583665	2166..2611	2075	97.9	Plus
X	23527363	X	559573..560022	2164..2611	2075	97.7	Plus
X	23527363	X	566593..567044	2162..2611	2070	97.5	Plus
2R	25260384	2R	24155395..24155843	2611..2165	2070	97.7	Minus
2R	25260384	2R	24148357..24148808	2611..2162	2070	97.5	Minus
3R	31820162	3R	17257112..17257562	2162..2611	2035	97.1	Plus
X	23527363	X	21626370..21626821	2611..2162	2030	97.3	Minus
3R	31820162	3R	17250107..17250553	2166..2611	2030	97.3	Plus
X	23527363	X	21633424..21633871	2611..2166	2025	97.5	Minus
X	23527363	X	5532993..5533443	2165..2611	2000	97.3	Plus
X	23527363	X	5536311..5536764	2162..2611	2000	97.1	Plus
Y	3410481	Y	683206..683656	2165..2611	1955	96.6	Plus
Y	3410481	Y	690212..690665	2162..2611	1955	96.4	Plus
3L	28103327	3L	9123743..9124057	2611..2297	1530	99	Minus
Y	3410481	Y	3269036..3269351	2612..2297	1520	98.7	Minus
Y	3410481	Y	3276088..3276403	2612..2297	1520	98.7	Minus
3L	28103327	3L	9077235..9077549	2297..2611	1515	98.7	Plus
3L	28103327	3L	9070246..9070560	2297..2611	1515	98.7	Plus
3R	31820162	3R	30123643..30123957	2297..2611	1515	98.7	Plus
3R	31820162	3R	26888604..26888918	2297..2611	1515	98.7	Plus
3R	31820162	3R	30116589..30116903	2297..2611	1515	98.7	Plus
3R	31820162	3R	26881565..26881879	2297..2611	1515	98.7	Plus
X	23527363	X	3995051..3995365	2611..2297	1500	98.4	Minus
X	23527363	X	4002113..4002427	2611..2297	1500	98.4	Minus
2R	25260384	2R	23922641..23922955	2611..2297	1485	98	Minus
2R	25260384	2R	23915588..23915902	2611..2297	1485	98	Minus
3L	28103327	3L	11565153..11565468	2297..2612	1475	97.7	Plus
3L	28103327	3L	11558100..11558415	2297..2612	1475	97.7	Plus
X	23527363	X	311095..311409	2611..2297	1470	97.7	Minus
X	23527363	X	304037..304351	2611..2297	1470	97.7	Minus
X	23527363	X	1048728..1049045	2297..2611	1450	98.1	Plus
X	23527363	X	1041669..1041986	2297..2611	1450	98.1	Plus
3L	28103327	3L	1054679..1054997	2611..2297	1385	97.1	Minus
3L	28103327	3L	1047531..1047849	2611..2297	1385	97.1	Minus
X	23527363	X	10094632..10094889	2..258	1250	99.6	Plus
Unmapped_scaffold_17	62570	Unmapped_scaffold_17	38813..39128	2485..2166	850	86.3	Minus
Y	3410481	Y	251215..251508	2493..2198	785	85.9	Minus
Y	3410481	Y	235775..236068	2493..2198	785	85.9	Minus
3L	28103327	3L	27703050..27703368	2485..2166	765	84.5	Minus
3L	28103327	3L	27695084..27695402	2485..2166	765	84.5	Minus
3L	28103327	3L	27677743..27678061	2485..2166	765	84.5	Minus
Y	3410481	Y	3269354..3269519	2326..2162	760	98.1	Minus
Y	3410481	Y	3276406..3276567	2326..2166	755	98.7	Minus
3L	28103327	3L	9077067..9077232	2162..2326	745	97.5	Plus
3L	28103327	3L	11564985..11565150	2162..2326	745	97.5	Plus
3L	28103327	3L	1055000..1055162	2326..2165	745	98.1	Minus
3L	28103327	3L	1047852..1048017	2326..2162	745	97.5	Minus
X	23527363	X	1048560..1048725	2162..2326	745	97.5	Plus
X	23527363	X	3995368..3995533	2326..2162	745	97.5	Minus
X	23527363	X	311412..311574	2326..2165	745	98.1	Minus
X	23527363	X	304354..304519	2326..2162	745	97.5	Minus
2R	25260384	2R	23922958..23923120	2326..2165	745	98.1	Minus
2R	25260384	2R	23915905..23916070	2326..2162	745	97.5	Minus
3R	31820162	3R	30123475..30123640	2162..2326	745	97.5	Plus
3R	31820162	3R	26888436..26888601	2162..2326	745	97.5	Plus
3L	28103327	3L	9070082..9070243	2166..2326	740	98.1	Plus
3L	28103327	3L	11557936..11558097	2166..2326	740	98.1	Plus
X	23527363	X	1041505..1041666	2166..2326	740	98.1	Plus
X	23527363	X	4002430..4002591	2326..2166	740	98.1	Minus
3R	31820162	3R	26881401..26881562	2166..2326	740	98.1	Plus
3R	31820162	3R	30116425..30116586	2166..2326	740	98.1	Plus
X	23527363	X	10142069..10142214	1511..1656	730	100	Plus
X	23527363	X	10142503..10142641	1656..1794	695	100	Plus
2L	23513712	2L	23423394..23423675	2199..2485	670	84.4	Plus
3R	31820162	3R	1034418..1034627	2158..2364	570	87.1	Plus
3R	31820162	3R	453495..453704	2364..2158	570	87.1	Minus
Unmapped_scaffold_39	40272	Unmapped_scaffold_39	2626..2835	2158..2364	570	87.1	Plus
3R	31820162	3R	1025956..1026167	2164..2372	550	86.3	Plus
2R	25260384	2R	2057237..2057446	2166..2372	525	85.7	Plus
3L	28103327	3L	24263714..24263903	2166..2352	515	87.3	Plus
3L	28103327	3L	27685840..27686029	2352..2166	515	87.3	Minus
3L	28103327	3L	9124126..9124219	2255..2162	455	98.9	Minus
X	23527363	X	21934164..21934341	2425..2246	445	85.7	Minus
2R	25260384	2R	1418532..1418639	2485..2378	375	89.8	Minus
Y	3410481	Y	2442331..2442423	2393..2485	360	92.4	Plus
Y	3410481	Y	2296099..2296191	2485..2393	360	92.4	Minus
Y	3410481	Y	2175102..2175194	2485..2393	360	92.4	Minus
2R	25260384	2R	8463067..8463226	2413..2252	355	84.1	Minus
3L	28103327	3L	9124060..9124141	2326..2246	340	96.3	Minus
X	23527363	X	10095440..10095506	258..324	335	100	Plus
3L	28103327	3L	27685711..27685808	2485..2388	325	88.7	Minus
Y	3410481	Y	2359959..2360093	2240..2372	325	85.1	Plus
Y	3410481	Y	2378806..2378940	2372..2240	325	85.1	Minus
3L	28103327	3L	24263930..24264022	2393..2485	315	89.2	Plus
Y	3410481	Y	2359874..2359974	2162..2261	315	89.1	Plus
Y	3410481	Y	2378925..2379025	2261..2162	315	89.1	Minus
3R	31820162	3R	1026179..1026276	2388..2485	310	87.7	Plus
Y	3410481	Y	2404944..2405078	2240..2372	310	84.4	Plus
Y	3410481	Y	2333833..2333967	2372..2240	310	84.4	Minus
2L	23513712	2L	23429167..23429274	2221..2326	310	88.8	Plus
Unmapped_scaffold_52	13455	Unmapped_scaffold_52	1536..1670	2240..2372	310	84.4	Plus
X	23527363	X	21934326..21934415	2255..2166	300	88.8	Minus
Y	3410481	Y	2442104..2442204	2162..2261	300	88.1	Plus
Y	3410481	Y	2442189..2442323	2240..2372	295	83.7	Plus
Y	3410481	Y	2296199..2296333	2372..2240	295	83.7	Minus
Y	3410481	Y	2175202..2175336	2372..2240	295	83.7	Minus
Y	3410481	Y	2404859..2404959	2162..2261	285	87.1	Plus
Y	3410481	Y	2296318..2296418	2261..2162	285	87.1	Minus
Y	3410481	Y	2175321..2175421	2261..2162	285	87.1	Minus
Y	3410481	Y	2333952..2334052	2261..2162	285	87.1	Minus
Unmapped_scaffold_52	13455	Unmapped_scaffold_52	1451..1551	2162..2261	285	87.1	Plus
2R	25260384	2R	1418643..1418736	2370..2278	280	88.2	Minus
3R	31820162	3R	453374..453475	2485..2388	275	86.2	Minus
3R	31820162	3R	1034647..1034748	2388..2485	275	86.2	Plus
Unmapped_scaffold_39	40272	Unmapped_scaffold_39	2855..2956	2388..2485	275	86.2	Plus
Y	3410481	Y	2354207..2354281	2411..2485	270	90.6	Plus
Y	3410481	Y	2384619..2384693	2485..2411	270	90.6	Minus
2R	25260384	2R	1418754..1418837	2243..2160	255	86.9	Minus
2R	25260384	2R	8463217..8463301	2249..2166	235	87	Minus
X	23527363	X	10114574..10114613	323..362	200	100	Plus
Y	3410481	Y	2389239..2389299	2312..2372	200	88.5	Plus
Y	3410481	Y	2349602..2349662	2372..2312	200	88.5	Minus
2R	25260384	2R	2057467..2057516	2436..2485	160	88	Plus
Y	3410481	Y	2349567..2349594	2420..2393	140	100	Minus
Y	3410481	Y	2389307..2389334	2393..2420	140	100	Plus
Y	3410481	Y	2333798..2333825	2420..2393	140	100	Minus
Y	3410481	Y	2405086..2405113	2393..2420	140	100	Plus
Unmapped_scaffold_52	13455	Unmapped_scaffold_52	1678..1705	2393..2420	140	100	Plus

Blast to na_te.dros performed 2019-03-16 07:34:32

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
412	7567	412 412 7567bp	7046..7528	2158..2607	1961	91.3	Plus
412	7567	412 412 7567bp	1..475	2166..2607	1948	91.8	Plus
gypsy11	4428	gypsy11 GYPSY11 4428bp	126..360	2274..2499	346	66	Plus
gypsy11	4428	gypsy11 GYPSY11 4428bp	4102..4336	2274..2499	346	66	Plus
roo	9092	roo DM_ROO 9092bp	1034..1139	1573..1674	124	60.4	Plus
Burdock	6411	Burdock DMU89994 6411bp Derived from U89994 (g1905850) (Rel. 51, Last updated, Version 1).	5195..5235	489..449	124	78	Minus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	1547..1605	1593..1654	123	69.4	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2319..2424	1512..1618	118	59.3	Plus

RE52190.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:35:10 Download gff for RE52190.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chrX	10025612..10025756	1512..1656	100	->	Plus
chrX	10026046..10026183	1657..1794	100	->	Plus
chrX	10029525..10029897	1795..2165	99	==	Plus
chrX	9978191..9978449	1..258	98	->	Plus
chrX	9979001..9979066	259..324	100	->	Plus
chrX	9998132..9998169	325..362	100	->	Plus
chrX	10013713..10013930	363..580	100	==	Plus
chrX	10014014..10014861	664..1511	99	->	Plus

Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:12:38 Download gff for RE52190.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG34104-RA	1..1296	504..1799	100		Plus

Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:54:28 Download gff for RE52190.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG34104-RA	1..1296	504..1799	100		Plus

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:32:46 Download gff for RE52190.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG34104-RA	1..1296	504..1799	100		Plus

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:45:33 Download gff for RE52190.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG34104-RA	1..1296	504..1799	100		Plus

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:36:41 Download gff for RE52190.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
RhoU-RA	1..1296	504..1799	100		Plus

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:12:38 Download gff for RE52190.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG34104-RA	2..2608	2..2607	99		Plus

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:54:27 Download gff for RE52190.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG34104-RA	2..2608	2..2607	99		Plus

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:32:46 Download gff for RE52190.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG34104-RA	7..2228	1..2221	99		Plus

Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:45:33 Download gff for RE52190.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG34104-RA	2..2608	2..2607	99		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:36:41 Download gff for RE52190.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
RhoU-RA	7..2228	1..2221	99		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:35:10 Download gff for RE52190.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	10086533..10086791	1..258	99	->	Plus
X	10087343..10087408	259..324	100	->	Plus
X	10106478..10106515	325..362	100	->	Plus
X	10122056..10123204	363..1511	100	->	Plus
X	10133972..10134116	1512..1656	100	->	Plus
X	10134406..10134543	1657..1794	100	->	Plus
X	10137899..10138711	1795..2607	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:35:10 Download gff for RE52190.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	10086533..10086791	1..258	99	->	Plus
X	10087343..10087408	259..324	100	->	Plus
X	10106478..10106515	325..362	100	->	Plus
X	10122056..10123204	363..1511	100	->	Plus
X	10133972..10134116	1512..1656	100	->	Plus
X	10134406..10134543	1657..1794	100	->	Plus
X	10137899..10138711	1795..2607	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:35:10 Download gff for RE52190.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	10086533..10086791	1..258	99	->	Plus
X	10087343..10087408	259..324	100	->	Plus
X	10106478..10106515	325..362	100	->	Plus
X	10122056..10123204	363..1511	100	->	Plus
X	10133972..10134116	1512..1656	100	->	Plus
X	10134406..10134543	1657..1794	100	->	Plus
X	10137899..10138711	1795..2607	100		Plus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:32:46 Download gff for RE52190.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_X	10000511..10000548	325..362	100	->	Plus
arm_X	9980566..9980824	1..258	99	->	Plus
arm_X	9981376..9981441	259..324	100	->	Plus
arm_X	10016089..10017237	363..1511	100	->	Plus
arm_X	10028005..10028149	1512..1656	100	->	Plus
arm_X	10028439..10028576	1657..1794	100	->	Plus
arm_X	10031932..10032744	1795..2607	100		Plus

Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:16:32 Download gff for RE52190.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	10094631..10094889	1..258	99	->	Plus
X	10095441..10095506	259..324	100	->	Plus
X	10114576..10114613	325..362	100	->	Plus
X	10130154..10131302	363..1511	100	->	Plus
X	10142070..10142214	1512..1656	100	->	Plus
X	10142504..10142641	1657..1794	100	->	Plus
X	10145997..10146809	1795..2607	100		Plus

RE52190.hyp Sequence

Translation from 503 to 1798

> RE52190.hyp
MTVKLAKLFGGVTTGGIEILDSPGNPQQHQEQQHLQQQQQQPLTAPQQHM
QQQPPPLPPPNANMKSLKYYEHLQATYDCHDLMDHDQDQDDYEDTCMQRN
HPYNNSQRPLLGDRRPQLTVMSVGKKGAKSGMQVQNLPPLPPLRTYISPY
VQQQKRDSAKGLHGFNDFDALSQQYNQHLQSPHIGYPYGSPPSPTAQSSD
FCFDRQTGLVMLPGTAGGQVSSSSSSNCSSSHTTSTSSPTRYYPDNPGHA
TGLFASRFEDDFCMRRPAVQESSSPIIAGGCGGGTGSGSGVALGVGGGPF
IFGIAPEQQVTDYGSNPLPPTPPQLKQQSVISRSPLQQSLSDTSAASSGK
GSKFLLRKRKSKKTTAAAAATTEAATTAKKDGKKAIAQPQPSIKCVLVGD
GAVGKTNLILSYLENRFNPEHIPTASDIYNV*

RE52190.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:54:06

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
RhoU-PA	431	CG34104-PA	1..431	1..431	2287	100	Plus
RhoU-PC	582	CG34104-PC	1..430	1..430	2283	100	Plus
RhoU-PB	582	CG34104-PB	1..430	1..430	2283	100	Plus

RE52190.pep Sequence

Translation from 503 to 1798

> RE52190.pep
MTVKLAKLFGGVTTGGIEILDSPGNPQQHQEQQHLQQQQQQPLTAPQQHM
QQQPPPLPPPNANMKSLKYYEHLQATYDCHDLMDHDQDQDDYEDTCMQRN
HPYNNSQRPLLGDRRPQLTVMSVGKKGAKSGMQVQNLPPLPPLRTYISPY
VQQQKRDSAKGLHGFNDFDALSQQYNQHLQSPHIGYPYGSPPSPTAQSSD
FCFDRQTGLVMLPGTAGGQVSSSSSSNCSSSHTTSTSSPTRYYPDNPGHA
TGLFASRFEDDFCMRRPAVQESSSPIIAGGCGGGTGSGSGVALGVGGGPF
IFGIAPEQQVTDYGSNPLPPTPPQLKQQSVISRSPLQQSLSDTSAASSGK
GSKFLLRKRKSKKTTAAAAATTEAATTAKKDGKKAIAQPQPSIKCVLVGD
GAVGKTNLILSYLENRFNPEHIPTASDIYNV*

RE52190.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 08:18:07

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dana\GF19196-PA	494	GF19196-PA	70..487	62..430	838	48.2	Plus
Dana\GF19196-PA	494	GF19196-PA	63..261	55..243	459	57.8	Plus

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 08:18:08

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG18345-PA	480	GG18345-PA	1..438	1..430	1592	88.4	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 08:18:10

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH12148-PA	715	GH12148-PA	116..363	96..314	457	46.3	Plus
Dgri\GH12148-PA	715	GH12148-PA	469..563	337..430	286	74	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:54:47

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
RhoU-PA	431	CG34104-PA	1..431	1..431	2287	100	Plus
RhoU-PC	582	CG34104-PC	1..430	1..430	2283	100	Plus
RhoU-PB	582	CG34104-PB	1..430	1..430	2283	100	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 08:18:11

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI15067-PA	657	GI15067-PA	1..506	1..431	815	45.6	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 08:18:12

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\GL18061-PA	323	GL18061-PA	34..274	61..321	596	57.4	Plus
Dper\GL18062-PA	100	GL18062-PA	4..87	345..429	302	76.5	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 08:18:14

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\GA11391-PA	365	GA11391-PA	79..336	63..321	681	60.4	Plus
Dpse\GA22295-PA	207	GA22295-PA	15..54	390..429	212	97.5	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 08:18:15

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\GM11408-PA	454	GM11408-PA	1..428	1..430	2152	95.6	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 08:18:16

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\GD16973-PA	346	GD16973-PA	1..337	1..336	1695	95.6	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 08:18:17

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\GJ18874-PA	419	GJ18874-PA	1..352	1..314	503	42.6	Plus
Dvir\GJ18875-PA	198	GJ18875-PA	6..46	390..430	225	97.6	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 08:18:19

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK19827-PA	587	GK19827-PA	1..435	1..430	716	48	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 08:18:20

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\GE17830-PA	486	GE17830-PA	1..439	1..430	1565	89.8	Plus

Library:	RE
Tissue Source:	Drosophila melanogaster embryo
Created by:	Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:	2000-10-23
Comments:	Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:	521
Well:	90
Vector:	pFlc-1
Associated Gene/Transcript	RhoU-RA
Protein status:	RE52190.pep: gold
Preliminary Size:	1246
Sequenced Size:	2623

Clone RE52190 Report

Clone and Library Details

Associated Genes

Clone Sequence Records

RE52190.complete Sequence

RE52190.complete Blast Records

RE52190.complete Sim4 Records

RE52190.hyp Sequence

RE52190.hyp Blast Records

RE52190.pep Sequence

RE52190.pep Blast Records