Clone RE52377 Report

Search the DGRC for RE52377

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:523
Well:77
Vector:pFlc-1
Associated Gene/Transcriptatt-ORFA-RA
Protein status:RE52377.pep: gold
Sequenced Size:1901

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4241 2003-01-01 Sim4 clustering to Release 3
att-ORFA 2008-04-29 Release 5.5 accounting
att-ORFA 2008-08-15 Release 5.9 accounting
att-ORFB 2008-08-15 Release 5.9 accounting
att-ORFA 2008-12-18 5.12 accounting
att-ORFB 2008-12-18 5.12 accounting

Clone Sequence Records

RE52377.complete Sequence

1901 bp (1901 high quality bases) assembled on 2004-12-16

GenBank Submission: BT021264

> RE52377.complete
AATCGCTCTTTGGAGCTTCGCAGGCGGAGTCCGAGAATCGCGCGGAAAAT
GTGCATTAACAAATAGAAAAATCCGAAATAAAGACAAAGAATTAGCTCGC
GGTTAAAGAGAATACAGCACCTGTGTTTTTGGAATCGAAAATCAGTGCGA
AACGCCTACCACTGCTGTGTGTTGTTGTTATTGTTGCCAAGGCCGAAGGA
GCGAAAAGGGAGGCCGAAAAAAAAGAATCTGTGCTAACAAAAACAAAGGT
CCCCCAGTCCGAGTCTGCGATGAGCCGACTCCTGGAGAAGCCCAACATCG
CCATGTCCATCAAGTCCACGGGTAGTCAGCTCTCGAGCACGATGACGACA
GCCTCGGCGACGCTGTCCTCGGACCTGGACGATGCGGACACATCCCGCAC
CCAGCTGAGTCCATCGGAAACATCTGGAGTAGTCCTCGTACCCGCCACTA
CAGTCACACCCATGCGCCAGAAAATCGACCAGGTGGTGATCAGCCTGATA
TCCGGAGCAGCGGCGGGGGCGCTGGCCAAGACGGTCATCGCCCCGCTGGA
CCGCACAAAGATCAACTTCCAGATCCGCAACGATGTGCCCTTCTCGTTTC
GAGCCTCGCTGCGCTACCTGCAAAACACCTATGCCAACGAGGGCGTTTTG
GCCCTGTGGCGGGGGAACTCGGCCACGATGGCCAGAATCGTGCCCTACGC
AGCCATACAGTTCACGGCCCACGAGCAGTGGCGTCGCATCCTGCACGTCG
ACAAGGACGGCACCAACACGAAAGGTCGTCGGTTTTTGGCTGGCTCCCTG
GCGGGAATCACCTCACAGTCGCTGACGTATCCTCTGGACCTGGCACGCGC
CCGCATGGCCGTCACGGATCGGTATACTGGCTATCGGACGCTGCGACAAG
TCTTCACCAAGATCTGGGTGGAGGAGGGTCCGCGGACGCTGTTCCGCGGC
TACTGGGCGACCGTTCTCGGCGTGATTCCCTATGCGGGCACCTCCTTCTT
CACCTACGAGACTCTTAAGCGGGAATACTATGAAGTGGTCGGCAACAATA
AACCCAATACTCTAGTCTCGCTGGCCTTCGGTGCTGCGGCTGGTGCCGCC
GGGCAAACGGCCAGCTATCCATTGGACATTGTGCGGCGAAGAATGCAGAC
AATGCGGGTGAACACGGCTGGCGGAGATCGGTACCCAACCATCCTGGAGA
CTCTCGTCAAGATCTATCGTGAGGAGGGCGTCAAGAACGGTTTCTACAAG
GGACTTAGCATGAACTGGATCAAGGGACCCATCGCCGTGGGCATCAGCTT
CTCCACCTACGATCTGATCAAGGCGTGGCTCACGGAGCTGGCCAACTTGA
GACGGGTTGAGAAATAGCCCAGCTCCCTGCCCCTGCCACTCGTCACCCAT
AAACACCACACCAAAAACGCACTGCTTTGATCTTAAGTCTCGCGATCGAT
GGATGAGCTGAGGAAATAGAAGTGAAGCACCGACATGCTCTAATTGTTAG
ATATTTTTTAGCTGTTAGTTGTGAGGGAGAGAAGCGATGAAGTGAAGACA
CCCGAAAGCGCTTAACTTTGTTATTAACCGTAATTGATTTATTATCGCCG
TAAGCCGAAAGTATATCAGCCAATAAACTGTCTGAATAATGACTCGCCTG
GCACATACTGCTCCCCAGGACCTCGTATTCAATGGTGTTGCTTTGACAAT
AACACTCCTAGATTAATGATTACGATTTACCCGAACATTTTGTATATTGT
GTATTGCCAACTCAATGTCAAGGCGCTGCGACTGTTAAAATAGTCATGAA
TTTGAGGGTGTTCACACCAGCATATACTATGTAATTCTTGTATGTTAGTG
TGTTTTTATTATTAAAATTTACAAAATTGTTTAACAAAAAAAAAAAAAAA
A

RE52377.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:50:51
Subject Length Description Subject Range Query Range Score Percent Strand
att-ORFA-RA 2086 att-ORFA-RA 172..2056 1..1885 9410 99.9 Plus
att-ORFA-RC 2086 att-ORFA-RC 172..2056 1..1885 9410 99.9 Plus
att-ORFA.a 1959 att-ORFA.a 45..1929 1..1885 9410 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 03:40:03
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 16376305..16376971 1885..1219 3335 100 Minus
chr3R 27901430 chr3R 16377810..16378113 766..463 1520 100 Minus
chr3R 27901430 chr3R 16377484..16377749 1032..767 1330 100 Minus
chr3R 27901430 chr3R 16381319..16381568 250..1 1235 99.6 Minus
chr3R 27901430 chr3R 16378620..16378835 462..247 1080 100 Minus
chr3R 27901430 chr3R 16377041..16377228 1219..1032 940 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:01:35 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 03:40:02
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 20552391..20553057 1885..1219 3335 100 Minus
3R 32079331 3R 20553896..20554199 766..463 1520 100 Minus
3R 32079331 3R 20553570..20553835 1032..767 1330 100 Minus
3R 32079331 3R 20557405..20557654 250..1 1235 99.6 Minus
3R 32079331 3R 20554706..20554921 462..247 1080 100 Minus
3R 32079331 3R 20553127..20553314 1219..1032 940 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:40:06
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 20293222..20293888 1885..1219 3335 100 Minus
3R 31820162 3R 20294727..20295030 766..463 1520 100 Minus
3R 31820162 3R 20294401..20294666 1032..767 1330 100 Minus
3R 31820162 3R 20298236..20298485 250..1 1235 99.6 Minus
3R 31820162 3R 20295537..20295752 462..247 1080 100 Minus
3R 31820162 3R 20293958..20294145 1219..1032 940 100 Minus
Blast to na_te.dros performed on 2019-03-16 03:40:02 has no hits.

RE52377.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 03:41:07 Download gff for RE52377.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 16376305..16376970 1220..1885 100 <- Minus
chr3R 16377041..16377227 1033..1219 100 <- Minus
chr3R 16377484..16377749 767..1032 100 <- Minus
chr3R 16377810..16378113 463..766 100 <- Minus
chr3R 16378620..16378833 249..462 100 <- Minus
chr3R 16381321..16381568 1..248 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:21:49 Download gff for RE52377.complete
Subject Subject Range Query Range Percent Splice Strand
att-ORFA-RC 1..1098 270..1367 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:22:00 Download gff for RE52377.complete
Subject Subject Range Query Range Percent Splice Strand
att-ORFA-RC 1..1098 270..1367 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:47:31 Download gff for RE52377.complete
Subject Subject Range Query Range Percent Splice Strand
att-ORFA-RA 1..1098 270..1367 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:05:57 Download gff for RE52377.complete
Subject Subject Range Query Range Percent Splice Strand
att-ORFA-RC 1..1098 270..1367 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:10:38 Download gff for RE52377.complete
Subject Subject Range Query Range Percent Splice Strand
att-ORFA-RA 1..1098 270..1367 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:23:08 Download gff for RE52377.complete
Subject Subject Range Query Range Percent Splice Strand
att-ORFA-RA 28..1912 1..1885 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:22:00 Download gff for RE52377.complete
Subject Subject Range Query Range Percent Splice Strand
att-ORFA-RA 28..1912 1..1885 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:47:31 Download gff for RE52377.complete
Subject Subject Range Query Range Percent Splice Strand
att-ORFA-RC 14..1898 1..1885 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:05:58 Download gff for RE52377.complete
Subject Subject Range Query Range Percent Splice Strand
att-ORFA-RA 28..1912 1..1885 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:10:38 Download gff for RE52377.complete
Subject Subject Range Query Range Percent Splice Strand
att-ORFA-RC 14..1898 1..1885 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:41:07 Download gff for RE52377.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20553127..20553313 1033..1219 100 <- Minus
3R 20553570..20553835 767..1032 100 <- Minus
3R 20552391..20553056 1220..1885 100 <- Minus
3R 20553896..20554199 463..766 100 <- Minus
3R 20554706..20554919 249..462 100 <- Minus
3R 20557407..20557654 1..248 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:41:07 Download gff for RE52377.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20553127..20553313 1033..1219 100 <- Minus
3R 20553570..20553835 767..1032 100 <- Minus
3R 20552391..20553056 1220..1885 100 <- Minus
3R 20553896..20554199 463..766 100 <- Minus
3R 20554706..20554919 249..462 100 <- Minus
3R 20557407..20557654 1..248 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:41:07 Download gff for RE52377.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20553127..20553313 1033..1219 100 <- Minus
3R 20553570..20553835 767..1032 100 <- Minus
3R 20552391..20553056 1220..1885 100 <- Minus
3R 20553896..20554199 463..766 100 <- Minus
3R 20554706..20554919 249..462 100 <- Minus
3R 20557407..20557654 1..248 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:47:31 Download gff for RE52377.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16380428..16380641 249..462 100 <- Minus
arm_3R 16378113..16378778 1220..1885 100 <- Minus
arm_3R 16378849..16379035 1033..1219 100 <- Minus
arm_3R 16379292..16379557 767..1032 100 <- Minus
arm_3R 16379618..16379921 463..766 100 <- Minus
arm_3R 16383129..16383376 1..248 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:42:21 Download gff for RE52377.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20293222..20293887 1220..1885 100 <- Minus
3R 20293958..20294144 1033..1219 100 <- Minus
3R 20294401..20294666 767..1032 100 <- Minus
3R 20294727..20295030 463..766 100 <- Minus
3R 20295537..20295750 249..462 100 <- Minus
3R 20298238..20298485 1..248 99   Minus

RE52377.pep Sequence

Translation from 269 to 1366

> RE52377.pep
MSRLLEKPNIAMSIKSTGSQLSSTMTTASATLSSDLDDADTSRTQLSPSE
TSGVVLVPATTVTPMRQKIDQVVISLISGAAAGALAKTVIAPLDRTKINF
QIRNDVPFSFRASLRYLQNTYANEGVLALWRGNSATMARIVPYAAIQFTA
HEQWRRILHVDKDGTNTKGRRFLAGSLAGITSQSLTYPLDLARARMAVTD
RYTGYRTLRQVFTKIWVEEGPRTLFRGYWATVLGVIPYAGTSFFTYETLK
REYYEVVGNNKPNTLVSLAFGAAAGAAGQTASYPLDIVRRRMQTMRVNTA
GGDRYPTILETLVKIYREEGVKNGFYKGLSMNWIKGPIAVGISFSTYDLI
KAWLTELANLRRVEK*

RE52377.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:52:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23201-PA 373 GF23201-PA 1..368 1..362 1617 86.4 Plus
Dana\GF24982-PA 596 GF24982-PA 302..585 76..348 429 36 Plus
Dana\GF17546-PA 222 GF17546-PA 12..198 123..307 309 37.6 Plus
Dana\GF11531-PA 340 GF11531-PA 10..312 73..350 281 27.9 Plus
Dana\GF16172-PA 335 GF16172-PA 27..331 66..351 277 25.6 Plus
Dana\GF24982-PA 596 GF24982-PA 300..472 170..351 188 28 Plus
Dana\GF11531-PA 340 GF11531-PA 14..196 173..352 182 30.5 Plus
Dana\GF24982-PA 596 GF24982-PA 391..589 72..251 167 26.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:52:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15401-PA 371 GG15401-PA 1..371 1..365 1864 95.7 Plus
Dere\GG13834-PA 626 GG13834-PA 332..615 76..348 426 35.8 Plus
Dere\GG17254-PA 332 GG17254-PA 26..328 66..351 271 25.3 Plus
Dere\GG18901-PA 307 GG18901-PA 15..307 69..354 268 28.9 Plus
Dere\GG19879-PA 323 GG19879-PA 24..315 87..365 268 28.1 Plus
Dere\GG13834-PA 626 GG13834-PA 330..502 170..351 198 29.1 Plus
Dere\GG13834-PA 626 GG13834-PA 421..619 72..251 179 27.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:52:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14166-PA 373 GH14166-PA 3..368 4..362 1382 77.4 Plus
Dgri\GH16067-PA 610 GH16067-PA 315..599 76..348 414 35.2 Plus
Dgri\GH19431-PA 349 GH19431-PA 22..342 61..348 288 26.9 Plus
Dgri\GH12093-PA 306 GH12093-PA 14..306 69..354 254 27.7 Plus
Dgri\GH12090-PA 299 GH12090-PA 11..282 73..336 251 29 Plus
Dgri\GH16067-PA 610 GH16067-PA 313..485 170..351 181 29.2 Plus
Dgri\GH16067-PA 610 GH16067-PA 404..603 72..251 176 27.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:32:21
Subject Length Description Subject Range Query Range Score Percent Strand
DPCoAC-PF 365 CG4241-PF 1..365 1..365 1849 100 Plus
DPCoAC-PC 365 CG4241-PC 1..365 1..365 1849 100 Plus
DPCoAC-PA 365 CG4241-PA 1..365 1..365 1849 100 Plus
DPCoAC-PD 364 CG4241-PD 1..364 1..365 1832 99.7 Plus
DPCoAC-PE 290 CG4241-PE 1..290 76..365 1492 99.7 Plus
DPCoAC-PB 290 CG4241-PB 1..290 76..365 1492 99.7 Plus
CG32103-PD 350 CG32103-PD 56..339 76..348 424 36.2 Plus
CG32103-PC 363 CG32103-PC 69..352 76..348 424 36.2 Plus
CG32103-PE 583 CG32103-PE 289..572 76..348 424 36.2 Plus
CG32103-PB 583 CG32103-PB 289..572 76..348 424 36.2 Plus
Tpc1-PA 332 CG6608-PA 4..328 51..351 299 25.5 Plus
Tpc1-PB 332 CG6608-PB 4..328 51..351 299 25.5 Plus
Tpc2-PB 323 CG2857-PB 4..315 70..365 291 29.2 Plus
sesB-PD 312 CG16944-PD 2..295 53..336 264 28.9 Plus
sesB-PC 312 CG16944-PC 2..295 53..336 264 28.9 Plus
sesB-PE 299 CG16944-PE 16..282 78..336 259 29.6 Plus
sesB-PB 299 CG16944-PB 16..282 78..336 259 29.6 Plus
sesB-PA 299 CG16944-PA 16..282 78..336 259 29.6 Plus
Ant2-PC 307 CG1683-PC 19..306 73..353 251 28.1 Plus
Ant2-PB 307 CG1683-PB 19..306 73..353 251 28.1 Plus
Ant2-PA 307 CG1683-PA 19..306 73..353 251 28.1 Plus
aralar1-PB 679 CG2139-PB 333..601 79..351 239 28.2 Plus
aralar1-PD 682 CG2139-PD 336..604 79..351 239 28.2 Plus
aralar1-PA 682 CG2139-PA 336..604 79..351 239 28.2 Plus
aralar1-PF 694 CG2139-PF 336..604 79..351 239 28.2 Plus
aralar1-PC 695 CG2139-PC 349..617 79..351 239 28.2 Plus
aralar1-PE 707 CG2139-PE 361..629 79..351 239 28.2 Plus
mfrn-PA 379 CG4963-PA 14..285 72..357 225 26.1 Plus
aralar1-PB 679 CG2139-PB 429..644 76..304 223 28.1 Plus
aralar1-PD 682 CG2139-PD 432..647 76..304 223 28.1 Plus
aralar1-PA 682 CG2139-PA 432..647 76..304 223 28.1 Plus
aralar1-PF 694 CG2139-PF 432..647 76..304 223 28.1 Plus
aralar1-PC 695 CG2139-PC 445..660 76..304 223 28.1 Plus
aralar1-PE 707 CG2139-PE 457..672 76..304 223 28.1 Plus
CG4995-PB 399 CG4995-PB 39..315 71..361 218 24.2 Plus
CG4995-PA 399 CG4995-PA 39..315 71..361 218 24.2 Plus
CG4995-PD 360 CG4995-PD 1..276 72..361 217 24.2 Plus
CG4995-PC 360 CG4995-PC 1..276 72..361 217 24.2 Plus
CG8026-PD 322 CG8026-PD 26..314 76..364 211 26.6 Plus
Bmcp-PB 303 CG7314-PB 11..303 77..353 210 27.4 Plus
Bmcp-PA 303 CG7314-PA 11..303 77..353 210 27.4 Plus
MME1-PA 299 CG3476-PA 9..242 67..294 207 27.2 Plus
CG32103-PD 350 CG32103-PD 54..226 170..351 204 29.7 Plus
CG32103-PC 363 CG32103-PC 67..239 170..351 204 29.7 Plus
CG32103-PE 583 CG32103-PE 287..459 170..351 204 29.7 Plus
CG32103-PB 583 CG32103-PB 287..459 170..351 204 29.7 Plus
GC1-PB 321 CG18347-PB 5..309 59..349 203 26 Plus
GC1-PA 321 CG18347-PA 5..309 59..349 203 26 Plus
Bmcp-PB 303 CG7314-PB 8..197 170..354 188 28.1 Plus
Bmcp-PA 303 CG7314-PA 8..197 170..354 188 28.1 Plus
CG8026-PB 304 CG8026-PB 26..281 76..329 187 26.8 Plus
Rim2-PD 272 CG18317-PD 22..263 117..359 186 23.7 Plus
Rim2-PC 358 CG18317-PC 108..349 117..359 186 23.7 Plus
Rim2-PA 365 CG18317-PA 115..356 117..359 186 23.7 Plus
colt-PD 306 CG3057-PD 3..244 60..294 183 25.1 Plus
colt-PA 306 CG3057-PA 3..244 60..294 183 25.1 Plus
CG32103-PD 350 CG32103-PD 145..343 72..251 176 28.1 Plus
CG32103-PC 363 CG32103-PC 158..356 72..251 176 28.1 Plus
CG32103-PE 583 CG32103-PE 378..576 72..251 176 28.1 Plus
CG32103-PB 583 CG32103-PB 378..576 72..251 176 28.1 Plus
CG8026-PD 322 CG8026-PD 20..215 166..360 176 29.3 Plus
CG8026-PB 304 CG8026-PB 20..215 166..360 176 29.3 Plus
CG18418-PA 311 CG18418-PA 16..264 74..320 175 23.3 Plus
CG7514-PA 301 CG7514-PA 17..264 77..330 173 25.3 Plus
PMP34-PB 314 CG32250-PB 14..303 71..350 168 21.9 Plus
PMP34-PA 314 CG32250-PA 14..303 71..350 168 21.9 Plus
CG2616-PB 449 CG2616-PB 158..420 110..353 165 24.5 Plus
CG2616-PA 449 CG2616-PA 158..420 110..353 165 24.5 Plus
CG1628-PC 305 CG1628-PC 16..302 73..355 163 24.9 Plus
MME1-PA 299 CG3476-PA 120..291 78..247 162 26.6 Plus
CG2616-PB 449 CG2616-PB 235..422 73..254 161 25.9 Plus
CG2616-PA 449 CG2616-PA 235..422 73..254 161 25.9 Plus
Tpc1-PA 332 CG6608-PA 22..222 162..353 160 28.2 Plus
Tpc1-PB 332 CG6608-PB 22..222 162..353 160 28.2 Plus
CG7514-PA 301 CG7514-PA 16..199 172..356 157 25.8 Plus
colt-PD 306 CG3057-PD 120..305 77..260 156 23.5 Plus
colt-PA 306 CG3057-PA 120..305 77..260 156 23.5 Plus
Rim2-PD 272 CG18317-PD 20..168 210..364 151 29 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:52:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10537-PA 374 GI10537-PA 1..369 1..362 1356 75.2 Plus
Dmoj\GI12332-PA 647 GI12332-PA 353..636 76..348 425 36.1 Plus
Dmoj\GI22635-PA 339 GI22635-PA 26..334 66..351 315 27.2 Plus
Dmoj\GI11098-PA 299 GI11098-PA 1..299 65..354 254 28.8 Plus
Dmoj\GI11099-PA 306 GI11099-PA 14..306 69..354 253 27.9 Plus
Dmoj\GI12332-PA 647 GI12332-PA 351..523 170..351 169 30.3 Plus
Dmoj\GI22635-PA 339 GI22635-PA 140..338 68..254 157 25.7 Plus
Dmoj\GI12332-PA 647 GI12332-PA 442..640 72..251 155 26.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:52:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13935-PA 383 GL13935-PA 1..378 1..362 1508 81 Plus
Dper\GL24959-PA 637 GL24959-PA 343..626 76..348 419 35.3 Plus
Dper\GL12058-PA 327 GL12058-PA 23..323 66..351 304 29.1 Plus
Dper\GL14863-PA 299 GL14863-PA 1..282 65..336 260 29.1 Plus
Dper\GL10902-PA 336 GL10902-PA 24..310 87..356 239 25.6 Plus
Dper\GL24959-PA 637 GL24959-PA 341..513 170..351 180 28 Plus
Dper\GL24959-PA 637 GL24959-PA 432..630 72..251 179 27.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:52:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18055-PA 383 GA18055-PA 1..378 1..362 1508 81 Plus
Dpse\GA16682-PA 635 GA16682-PA 341..624 76..348 420 35.3 Plus
Dpse\GA26180-PA 327 GA26180-PA 23..323 66..351 305 29.1 Plus
Dpse\sesB-PA 299 GA14229-PA 1..282 65..336 260 29.1 Plus
Dpse\GA14170-PA 307 GA14170-PA 19..307 73..354 257 28 Plus
Dpse\GA16682-PA 635 GA16682-PA 339..511 170..351 180 28 Plus
Dpse\GA16682-PA 635 GA16682-PA 430..628 72..251 179 27.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:52:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23186-PA 365 GM23186-PA 1..365 1..365 1905 98.9 Plus
Dsec\GM24660-PA 629 GM24660-PA 335..618 76..348 430 36.2 Plus
Dsec\GM26138-PA 332 GM26138-PA 26..328 66..351 280 26.5 Plus
Dsec\GM11781-PA 323 GM11781-PA 24..315 87..365 272 28.8 Plus
Dsec\GM11286-PA 299 GM11286-PA 1..282 65..336 263 29.4 Plus
Dsec\GM24660-PA 629 GM24660-PA 333..505 170..351 200 29.7 Plus
Dsec\GM24660-PA 629 GM24660-PA 424..622 72..251 178 27.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:52:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20059-PA 371 GD20059-PA 1..371 1..365 1893 97.6 Plus
Dsim\GD12723-PA 629 GD12723-PA 335..618 76..348 430 36.2 Plus
Dsim\GD20692-PA 332 GD20692-PA 26..328 66..351 281 26.5 Plus
Dsim\GD16013-PA 299 GD16013-PA 1..282 65..336 263 29.4 Plus
Dsim\GD23676-PA 399 GD23676-PA 39..315 71..361 236 24.5 Plus
Dsim\GD12723-PA 629 GD12723-PA 333..505 170..351 200 29.7 Plus
Dsim\GD12723-PA 629 GD12723-PA 424..622 72..251 178 27.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:52:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24190-PA 372 GJ24190-PA 1..368 1..362 1447 77.5 Plus
Dvir\GJ12223-PA 650 GJ12223-PA 356..639 76..348 425 36.1 Plus
Dvir\GJ23881-PA 346 GJ23881-PA 7..341 49..351 304 26.8 Plus
Dvir\GJ15782-PA 299 GJ15782-PA 16..299 78..354 256 29.6 Plus
Dvir\GJ17180-PA 350 GJ17180-PA 1..297 73..348 244 26.3 Plus
Dvir\GJ12223-PA 650 GJ12223-PA 354..526 170..351 189 29.7 Plus
Dvir\GJ12223-PA 650 GJ12223-PA 445..643 72..251 175 27.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:52:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22721-PA 378 GK22721-PA 1..373 1..362 1444 79.9 Plus
Dwil\GK20580-PA 601 GK20580-PA 307..590 76..348 439 36.5 Plus
Dwil\GK13285-PA 330 GK13285-PA 20..324 62..351 288 27.3 Plus
Dwil\GK20736-PA 332 GK20736-PA 10..312 73..354 282 27.3 Plus
Dwil\GK16282-PA 307 GK16282-PA 15..307 69..354 264 28.1 Plus
Dwil\GK20580-PA 601 GK20580-PA 305..477 170..351 188 28 Plus
Dwil\GK20580-PA 601 GK20580-PA 396..594 72..251 172 27.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:52:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25066-PA 371 GE25066-PA 1..371 1..365 1854 94.9 Plus
Dyak\GE20124-PA 624 GE20124-PA 330..613 76..348 430 36.2 Plus
Dyak\GE24656-PA 334 GE24656-PA 28..330 66..351 274 25.9 Plus
Dyak\GE15372-PA 307 GE15372-PA 15..307 69..354 265 28.7 Plus
Dyak\GE11403-PA 323 GE11403-PA 24..315 87..365 262 28.1 Plus
Dyak\GE20124-PA 624 GE20124-PA 328..500 170..351 197 29.1 Plus
Dyak\GE20124-PA 624 GE20124-PA 419..617 72..251 179 27.6 Plus

RE52377.hyp Sequence

Translation from 269 to 1366

> RE52377.hyp
MSRLLEKPNIAMSIKSTGSQLSSTMTTASATLSSDLDDADTSRTQLSPSE
TSGVVLVPATTVTPMRQKIDQVVISLISGAAAGALAKTVIAPLDRTKINF
QIRNDVPFSFRASLRYLQNTYANEGVLALWRGNSATMARIVPYAAIQFTA
HEQWRRILHVDKDGTNTKGRRFLAGSLAGITSQSLTYPLDLARARMAVTD
RYTGYRTLRQVFTKIWVEEGPRTLFRGYWATVLGVIPYAGTSFFTYETLK
REYYEVVGNNKPNTLVSLAFGAAAGAAGQTASYPLDIVRRRMQTMRVNTA
GGDRYPTILETLVKIYREEGVKNGFYKGLSMNWIKGPIAVGISFSTYDLI
KAWLTELANLRRVEK*

RE52377.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:22:58
Subject Length Description Subject Range Query Range Score Percent Strand
att-ORFA-PF 365 CG4241-PF 1..365 1..365 1849 100 Plus
att-ORFA-PC 365 CG4241-PC 1..365 1..365 1849 100 Plus
att-ORFA-PA 365 CG4241-PA 1..365 1..365 1849 100 Plus
att-ORFA-PD 364 CG4241-PD 1..364 1..365 1832 99.7 Plus
att-ORFA-PE 290 CG4241-PE 1..290 76..365 1492 99.7 Plus