BDGP Sequence Production Resources |
Search the DGRC for RE52507
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 525 |
Well: | 7 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Incenp-RA |
Protein status: | RE52507.pep: gold |
Sequenced Size: | 2431 |
Gene | Date | Evidence |
---|---|---|
CG12165 | 2002-11-02 | Blastp of sequenced clone |
CG12165 | 2003-01-01 | Sim4 clustering to Release 3 |
Incenp | 2008-04-29 | Release 5.5 accounting |
Incenp | 2008-08-15 | Release 5.9 accounting |
Incenp | 2008-12-18 | 5.12 accounting |
2431 bp (2431 high quality bases) assembled on 2002-11-02
GenBank Submission: BT001674
> RE52507.complete AATTGCCGCCATTTGAAAAAAACGATAAAATCGAAGGAACCGAATCCGGA TTTGCAGTTTGTCAGATACAGTCGCTAGATATGGAGGACATCTTGGGCGT GCTGGGCTCGCTTTCGGACCTGCGCAGGGAGCTCGAGGTCCTGCGCAAGG CCCACTTTGAGGAGCTGGACCACCTCTTCTACGGCACAGGCCAGCCGGAG GCGGAGGCCAAACCGAGGGACAGTGCTCCGGCAGCGAAGAGTCAGGAGAA CTCTTCGGTGACGCCGCAGCAAACGAAAAAGCGCCCCAAGCGACTCACCT CACTGGCCGAGGATCAGAATGAGCCCGAGGCTCCAGACGCCACGGCCAAC AACACGTCGGCCCGTCAAAGCACTCGGGTCAGCAACTCCCAGTTGCTGGC TATCGCCGAGGACGAGCACAACTCCACGGCCTCGCTGATGCCGCCTCCGC CTGTGCCCGTCTCGGCGGACACCACCCTCGGCTCCGGAAGGCCACAGCGA GCCGCTAAGCTGAAGACCGAGAAATTACTCAAGGAGCCCTCACTCAACCG TAAGATGCGGCGGCCCAGCAGCGAGGAGCTCGTAAAGGTCAAGGTTGAGA GCGAGCAGCGAGTCTCCCAGTTTAACAGCTTCACCAGTGCACAGGCGTTA GAGGAAAATAAACTAGCGGAGCCGGAACTAGAAGAGCCAGCAGCAGAAAC AGCTGAGCAGCAAAAGCCTCCGGAGGAGGCCTCAGTCACAGAGGACGTGA ACACCACGAAGACACTCCGCGTGAAGGTAAAGCGCGAGAAACTCAGTACC GAAGCAGTGCCCCCGTTAACCAATGCGGTCTCCACGGCAAATGTGACCAC CGTCTCCTCTGTAACAACGGAGGCAGCGCGACCGGACGATACGGTGGCCA GCAACACGACGACATCCACGGAGGTCTCCAAGAAGGTCCGCAAGAAGAAG AAGGACGTGGAAAGCCACCGACCCATAAAGGTGGAACGATTCAGCGACCT GGACAAGAGCTCGCCAGTCTCGTCGCGCACGCGCAAGTGTAGCAGCGATT CGCGAACGGTTCAGGAGCGATCCATATACAAGGATGCACTCGAAGATCCG CCCGTTGCAGAGCAATCAGTGGCTGCAGTTGCTCCGGCTGCTGTCAATGA GACCGTGGCGATTTCCAACGCCACCCTCGTACTGGGTCCTGCGCCGACGA GCGATAGTCCAATAGGACCAGCTGGAGATGCCACTTTTGAGGTGCACTCC AACGACAAGAAACAACCTCTGAGTAAGCAGGACAGCCTCTTAACGGAGGA CGAGTCGGTGGAGGAGAAGCTGCCGACGACCAAGCTGCTCTCGAGCATAA AGGCTATAAAACTGCCTACCCGTACACATGAGCTTTTCAACCCACTGCTT CAGAGTCCAGTGAAAATGCGCGTGGAGGCGTTCGAGAATGCGGCAAACGC ACAGAACAGCATGCGCCCTAAGCGGGGAAAAGATCTGCAGGGCACGCCAG GATCAAACAACACTCCCAAAATTGGCAAGCTGCCTGCTCCGACTGTTGGT CGCTTTTTCACACCGACTCAAACGACAAGCACACTACCATTAAGCTCGGC GCAGCCCAAGAAGGGACCTGCCAGCGCGTCTAAGGCCACTAGTCTGCTGA AGACGGCCACCGGTACGAACCTAAGGTCGGTCAATTCCACGTCCACAAAA ACGCTGTCGCGCGAGAACAGCGGAGACGACTTCCGCAAGGGCCTGCACAA TCTGGCGGAGGAGCGCAAGAAGCTGCGTGAGCAAAAGCACCAGCAGGCTG CCCAGCAGCGCGAAGCCAAGGAGCGGGAGCGGGCAGAGCGTATGGCCAAG CTGGCCGCCGAGCGCGCCAAGAAGCAGGAGGAGCGAAAGCGAATTGAAGA GCGCAAACGACAAGAGCTGGAGGAGCTGCAGCGGAAGATGCGCCAGCAAG AGGAAGCCGAGGCGCTCAAGAAGGCCAAGTTCAAGGAGCTGGAGCAGCAG AAACTGCAGCAGCTAACCGGCGCCAAGCCCAAGAAGATGCTTCCGCCGCC GCCGAAAACCAAGTACACCTGGGAGATGCTGCACGAAGACGACTCGACAG ACGACGAGGGAAAGGTCACCCACAAGCGTCCCCCAGCGCCCACCTGGAGT CGAAGCCACGTAAGGGGAGAGGCAATTGCTATGCAGAGCCACTGCCCAAC CGACATCATCGACAGCTTTTTCTCGGTGGCGCCCACCACACCGGACCTAA AGCAGATATTCCCGAACATCGATCCCAGCCAGCTGAAGCGAAACTCCAGC GTGCTGTGGTCCACGCCGCCGCGCTATTCCGAGCTGCCGAAATACTAGCC AAGTAGTCCTGCTCTCTTCTCCCGTAAATGCACATGTTTATGATCGAATA AATAAAGTTAATTGCGAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 3166453..3167513 | 330..1390 | 5305 | 100 | Plus |
chr2R | 21145070 | chr2R | 3167817..3168485 | 1487..2155 | 3345 | 100 | Plus |
chr2R | 21145070 | chr2R | 3168641..3168900 | 2155..2414 | 1300 | 100 | Plus |
chr2R | 21145070 | chr2R | 3166206..3166388 | 148..330 | 915 | 100 | Plus |
chr2R | 21145070 | chr2R | 3165996..3166145 | 1..150 | 750 | 100 | Plus |
chr2R | 21145070 | chr2R | 3167577..3167673 | 1391..1487 | 485 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 7279106..7280166 | 330..1390 | 5305 | 100 | Plus |
2R | 25286936 | 2R | 7280470..7281138 | 1487..2155 | 3345 | 100 | Plus |
2R | 25286936 | 2R | 7281294..7281559 | 2155..2420 | 1315 | 99.6 | Plus |
2R | 25286936 | 2R | 7278859..7279041 | 148..330 | 915 | 100 | Plus |
2R | 25286936 | 2R | 7278649..7278798 | 1..150 | 750 | 100 | Plus |
2R | 25286936 | 2R | 7280230..7280326 | 1391..1487 | 485 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 7280305..7281365 | 330..1390 | 5305 | 100 | Plus |
2R | 25260384 | 2R | 7281669..7282337 | 1487..2155 | 3345 | 100 | Plus |
2R | 25260384 | 2R | 7282493..7282758 | 2155..2420 | 1315 | 99.6 | Plus |
2R | 25260384 | 2R | 7280058..7280240 | 148..330 | 915 | 100 | Plus |
2R | 25260384 | 2R | 7279848..7279997 | 1..150 | 750 | 100 | Plus |
2R | 25260384 | 2R | 7281429..7281525 | 1391..1487 | 485 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsil\Loa | 7779 | Dsil\Loa DSV28T24 7779bp AKA(S39346) Derived from X60177 (Rel. 37, Last updated, Version 8). | 3976..4034 | 1725..1782 | 121 | 69.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 3165996..3166144 | 1..149 | 100 | -> | Plus |
chr2R | 3166208..3166388 | 150..330 | 100 | -> | Plus |
chr2R | 3166454..3167513 | 331..1390 | 100 | -> | Plus |
chr2R | 3167577..3167673 | 1391..1487 | 100 | -> | Plus |
chr2R | 3167818..3168484 | 1488..2154 | 100 | -> | Plus |
chr2R | 3168641..3168902 | 2155..2416 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Incenp-RA | 1..2268 | 81..2348 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Incenp-RA | 1..2268 | 81..2348 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Incenp-RA | 1..2268 | 81..2348 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Incenp-RA | 1..2268 | 81..2348 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Incenp-RA | 1..2268 | 81..2348 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Incenp-RA | 183..2598 | 1..2416 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Incenp-RA | 183..2598 | 1..2416 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Incenp-RA | 183..2598 | 1..2416 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Incenp-RA | 183..2598 | 1..2416 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Incenp-RA | 44..2459 | 1..2416 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7278649..7278797 | 1..149 | 100 | -> | Plus |
2R | 7278861..7279041 | 150..330 | 100 | -> | Plus |
2R | 7279107..7280166 | 331..1390 | 100 | -> | Plus |
2R | 7280230..7280326 | 1391..1487 | 100 | -> | Plus |
2R | 7280471..7281137 | 1488..2154 | 100 | -> | Plus |
2R | 7281294..7281555 | 2155..2416 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7278649..7278797 | 1..149 | 100 | -> | Plus |
2R | 7278861..7279041 | 150..330 | 100 | -> | Plus |
2R | 7279107..7280166 | 331..1390 | 100 | -> | Plus |
2R | 7280230..7280326 | 1391..1487 | 100 | -> | Plus |
2R | 7280471..7281137 | 1488..2154 | 100 | -> | Plus |
2R | 7281294..7281555 | 2155..2416 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7278649..7278797 | 1..149 | 100 | -> | Plus |
2R | 7278861..7279041 | 150..330 | 100 | -> | Plus |
2R | 7279107..7280166 | 331..1390 | 100 | -> | Plus |
2R | 7280230..7280326 | 1391..1487 | 100 | -> | Plus |
2R | 7280471..7281137 | 1488..2154 | 100 | -> | Plus |
2R | 7281294..7281555 | 2155..2416 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 3166366..3166546 | 150..330 | 100 | -> | Plus |
arm_2R | 3166154..3166302 | 1..149 | 100 | -> | Plus |
arm_2R | 3166612..3167671 | 331..1390 | 100 | -> | Plus |
arm_2R | 3167735..3167831 | 1391..1487 | 100 | -> | Plus |
arm_2R | 3167976..3168642 | 1488..2154 | 100 | -> | Plus |
arm_2R | 3168799..3169060 | 2155..2416 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7280306..7281365 | 331..1390 | 100 | -> | Plus |
2R | 7281429..7281525 | 1391..1487 | 100 | -> | Plus |
2R | 7281670..7282336 | 1488..2154 | 100 | -> | Plus |
2R | 7282493..7282754 | 2155..2416 | 99 | Plus | |
2R | 7279848..7279996 | 1..149 | 100 | -> | Plus |
2R | 7280060..7280240 | 150..330 | 100 | -> | Plus |
Translation from 2 to 2347
> RE52507.hyp LPPFEKNDKIEGTESGFAVCQIQSLDMEDILGVLGSLSDLRRELEVLRKA HFEELDHLFYGTGQPEAEAKPRDSAPAAKSQENSSVTPQQTKKRPKRLTS LAEDQNEPEAPDATANNTSARQSTRVSNSQLLAIAEDEHNSTASLMPPPP VPVSADTTLGSGRPQRAAKLKTEKLLKEPSLNRKMRRPSSEELVKVKVES EQRVSQFNSFTSAQALEENKLAEPELEEPAAETAEQQKPPEEASVTEDVN TTKTLRVKVKREKLSTEAVPPLTNAVSTANVTTVSSVTTEAARPDDTVAS NTTTSTEVSKKVRKKKKDVESHRPIKVERFSDLDKSSPVSSRTRKCSSDS RTVQERSIYKDALEDPPVAEQSVAAVAPAAVNETVAISNATLVLGPAPTS DSPIGPAGDATFEVHSNDKKQPLSKQDSLLTEDESVEEKLPTTKLLSSIK AIKLPTRTHELFNPLLQSPVKMRVEAFENAANAQNSMRPKRGKDLQGTPG SNNTPKIGKLPAPTVGRFFTPTQTTSTLPLSSAQPKKGPASASKATSLLK TATGTNLRSVNSTSTKTLSRENSGDDFRKGLHNLAEERKKLREQKHQQAA QQREAKERERAERMAKLAAERAKKQEERKRIEERKRQELEELQRKMRQQE EAEALKKAKFKELEQQKLQQLTGAKPKKMLPPPPKTKYTWEMLHEDDSTD DEGKVTHKRPPAPTWSRSHVRGEAIAMQSHCPTDIIDSFFSVAPTTPDLK QIFPNIDPSQLKRNSSVLWSTPPRYSELPKY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Incenp-PB | 755 | CG12165-PB | 1..755 | 27..781 | 3801 | 100 | Plus |
Incenp-PA | 755 | CG12165-PA | 1..755 | 27..781 | 3801 | 100 | Plus |
Incenp-PC | 754 | CG12165-PC | 1..754 | 27..781 | 3784 | 99.9 | Plus |
Muc68D-PB | 1514 | CG6004-PB | 325..917 | 68..716 | 206 | 19.3 | Plus |
Muc30E-PC | 1702 | CG33300-PC | 380..1031 | 76..718 | 196 | 17.2 | Plus |
Translation from 80 to 2347
> RE52507.pep MEDILGVLGSLSDLRRELEVLRKAHFEELDHLFYGTGQPEAEAKPRDSAP AAKSQENSSVTPQQTKKRPKRLTSLAEDQNEPEAPDATANNTSARQSTRV SNSQLLAIAEDEHNSTASLMPPPPVPVSADTTLGSGRPQRAAKLKTEKLL KEPSLNRKMRRPSSEELVKVKVESEQRVSQFNSFTSAQALEENKLAEPEL EEPAAETAEQQKPPEEASVTEDVNTTKTLRVKVKREKLSTEAVPPLTNAV STANVTTVSSVTTEAARPDDTVASNTTTSTEVSKKVRKKKKDVESHRPIK VERFSDLDKSSPVSSRTRKCSSDSRTVQERSIYKDALEDPPVAEQSVAAV APAAVNETVAISNATLVLGPAPTSDSPIGPAGDATFEVHSNDKKQPLSKQ DSLLTEDESVEEKLPTTKLLSSIKAIKLPTRTHELFNPLLQSPVKMRVEA FENAANAQNSMRPKRGKDLQGTPGSNNTPKIGKLPAPTVGRFFTPTQTTS TLPLSSAQPKKGPASASKATSLLKTATGTNLRSVNSTSTKTLSRENSGDD FRKGLHNLAEERKKLREQKHQQAAQQREAKERERAERMAKLAAERAKKQE ERKRIEERKRQELEELQRKMRQQEEAEALKKAKFKELEQQKLQQLTGAKP KKMLPPPPKTKYTWEMLHEDDSTDDEGKVTHKRPPAPTWSRSHVRGEAIA MQSHCPTDIIDSFFSVAPTTPDLKQIFPNIDPSQLKRNSSVLWSTPPRYS ELPKY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12704-PA | 750 | GF12704-PA | 1..750 | 1..755 | 2484 | 72.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23270-PA | 754 | GG23270-PA | 1..754 | 1..755 | 3404 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21527-PA | 777 | GH21527-PA | 1..777 | 1..755 | 1885 | 54.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Incenp-PB | 755 | CG12165-PB | 1..755 | 1..755 | 3801 | 100 | Plus |
Incenp-PA | 755 | CG12165-PA | 1..755 | 1..755 | 3801 | 100 | Plus |
Incenp-PC | 754 | CG12165-PC | 1..754 | 1..755 | 3784 | 99.9 | Plus |
Muc68D-PB | 1514 | CG6004-PB | 325..917 | 42..690 | 206 | 19.3 | Plus |
Muc30E-PC | 1702 | CG33300-PC | 380..1031 | 50..692 | 196 | 17.2 | Plus |
Muc30E-PC | 1702 | CG33300-PC | 677..1297 | 40..692 | 181 | 16.9 | Plus |
Muc30E-PC | 1702 | CG33300-PC | 1101..1570 | 59..539 | 167 | 19.3 | Plus |
Muc30E-PC | 1702 | CG33300-PC | 222..887 | 40..692 | 161 | 16.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19498-PA | 778 | GI19498-PA | 1..778 | 1..755 | 1882 | 56.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11159-PA | 1182 | GL11159-PA | 462..1182 | 24..755 | 2274 | 69.1 | Plus |
Dper\GL11159-PA | 1182 | GL11159-PA | 1..460 | 1..468 | 1176 | 58.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24630-PA | 744 | GA24630-PA | 1..744 | 1..755 | 2442 | 68.9 | Plus |
Dpse\GA24631-PA | 740 | GA24631-PA | 1..740 | 1..755 | 2431 | 68.1 | Plus |
Dpse\GA22537-PA | 185 | GA22537-PA | 1..185 | 570..755 | 883 | 89.2 | Plus |
Dpse\GA25500-PA | 168 | GA25500-PA | 1..168 | 587..755 | 808 | 89.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20943-PA | 757 | GM20943-PA | 1..757 | 1..755 | 3820 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15339-PA | 889 | GD15339-PA | 380..888 | 200..706 | 2511 | 96.3 | Plus |
Dsim\GD15339-PA | 889 | GD15339-PA | 1..378 | 1..397 | 1677 | 87.4 | Plus |
Dsim\GD10468-PA | 310 | GD10468-PA | 1..310 | 446..755 | 1637 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21068-PA | 780 | GJ21068-PA | 1..780 | 1..755 | 1938 | 56.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21798-PA | 770 | GK21798-PA | 1..770 | 1..755 | 2089 | 59.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19118-PA | 743 | GE19118-PA | 1..743 | 1..755 | 3330 | 89.8 | Plus |