Clone RE52535 Report

Search the DGRC for RE52535

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:525
Well:35
Vector:pFlc-1
Associated Gene/TranscriptNdae1-RB
Protein status:RE52535.pep: gold
Sequenced Size:4064

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Ndae1 2011-03-21 Manual selection by Ken Wan

Clone Sequence Records

RE52535.complete Sequence

4064 bp assembled on 2011-06-10

GenBank Submission: BT128745.1

> RE52535.complete
AGTTAGTTAGTCTGCAATCGCCGGGACTCGCAGTCGAGTCGTCGGATCGC
GTTTTTCAACCGAATTCGAAAAGTACAAATTCTAGCGATCCGAAAATCCA
AACGATTAAAATCCAATAATAAAACGGAACAACACGTTCGCTTTTTATTG
TGTCCACACTATTTTTACGCTATCAATTTGCTTTTTCGGCTGATAATCGC
GAGGTGCGTGTGTGAAATTTTCGTGCAAACGGGCAAAAAAAAAAAAATAT
AACTCCAGTTCTTCGATCGCTATTTTGTGGCGATAAGGTGATGGCCGAAA
AGAATGAGTACATCGAATTACCTTGGACCATGAACTCCTCCAGCGGCGAT
GACGAGGCGCCGAAGGATCCGCGCACTGGCGGCGAGGATTTTACGCAACA
ATTTACAGAGAATGATTTCGAGGGACATCGGGCCCACACCGTTTATGTGG
GCGTCCATGTGCCAGGAGGACGACGCCACTCGCAGCGCCGCCGCAAGCAT
CACCACAGTGGCCCCGGAGGTGGTGGCGGTGGCGGAGGTGGAGGCGGCTC
CATCGGCGGATCCGGAAGTGTGGGCGGTGGTGCGGGCAAGGACAACGTCA
GCGAGAAGCAACAGGAAGTGGAGCGACCAGTGACTCCGCCGGCACAGCGA
GTTCAATTCATACTTGGCGAGGATGTGGACGATGGCACACACGTATCGCA
TCCCCTGTTTTCGGAAATGGGGATGCTGGTCAAGGAGGGCGACGAGATCG
AGTGGAAGGAGACAGCGCGATGGATCAAATTCGAGGAGGATGTGGAGGAG
GGTGGCAATCGATGGTCGAAGCCGCACGTGGCCACGCTCTCCCTGCACTC
CCTGTTCGAGCTGCGTCGCCTGCTGGTCAATGGCAGCGTGATGCTGGACA
TGGAGGCCCAAAATCTGGAGGTGATGGCCGATCTCGTGTGCGATCACATG
GTCAGTGCGGGAACATTGCCGCCCGGTGTAAAGGATAAGGTCAAGGACGC
GCTCCTGCGACGACATCGGCATCAGCACGAGTATGCCAAAAAGACGCGAC
TGCCAATTATTCGATCCCTGGCCGATATGCGCAATCACTCGTCATCAAAA
AAGAAAAAATCTAATTCTAAACACTCGCGACCCGCACAAAACCTGTCATC
GATCACAGAGGACATGGTCAAGAGTCCCAGTAACCAGTCGATGGCCAGGC
CAGGAAGCGGAACGGAACTCAGCGAGCAGCAGCACAAGGGCAACACCCAC
TTCATGAGGAAGATACCGCCGGGCGCGGAGGCCAGCAACATTCTCGTGGG
CGAGGTTGATTTCCTGGAGCGCACCCTGTCCTGTTTCATCCGTCTGAGCC
AGGCGGTCGTCCTGGGCGATCTCACCGAGGTGCCAGTGCCCACAAGATTC
GTCTTCATACTGCTTGGTCCGCCTGGCAGTCAGAGCAACTTCCACGAGAT
TGGCCGCGCGATGGCCACCCTGATGTCCGACGAGATCTTTCACGAGGTGG
CGTACCGTGCCCGCAAGCGGGATCATCTGCTCTCCGGAGTGGATGAGTTC
CTCGATGCGGTGACCGTACTGCCGCCAGGAGAATGGGATCCAACCATACG
AATTGAGCCACCAGCGGCGATTCCCTCGCAGGAAGTCAGGAAGCGGCCGC
CAGAGTTGCCCAAGGAGGAGGTGGACGAGGAGGAGGAGGAAGCGCGTCTT
CGCGAGGAGAACGGACTGTCCAGGACGGGAAGGCTTTTCGGAGGCCTCAT
CAACGACATCAAGAGGAAGGCGCCGTGGTACATAAGCGATTACAAGGACG
CCCTATCCATGCAGTGCGTGGCATCGTGGATCTTTCTGTACTTCGCCTGC
CTGTCGCCGATCATCACGTTCGGAGGACTCCTGGCGGAGGCCACTGGCAA
GCACATGGCTGCGATGGAGTCCTTGGTCTCTGGTTTCGTTTGTGGCATGG
GCTATGGCTTCTTTTCGGGTCAGCCGCTGACAATTCTCGGGTCCACCGGT
CCAGTCCTGGTCTTTGAGTCAATTATCTACGAGTTCTGTCTGAAGATGGG
CTGGGACTATATGACTTTCCGGTTCTGGATCGGCATGTGGGTCGCCGGCA
TTTGCATCGTCCTGACCGCGATTGATGCCAGTGCCCTCGTCTGCTACATC
ACCCGCTTCACCGAGGAGAACTTCGCCACCCTGATCGCTTTCATCTTCAT
CTACAAGGCTATTGAGAACGTGATGGTCATTGGAAAGAACTTCCCGGTCA
ATCAGGGCATATACGACTGTGTCTGTACACCGCCAATTGGGAGCAATGCC
AGTGTGATCGATTATGCCAAGTACAATTGGGATTCTTGTGAGTCCTACAA
TGGCACCTTGGTTGGTGGAGATTGCGGAACGCCGCCCACCGAAAACGTTT
TCCTCATGTCGGTGGTCCTCTGCGCCGGCACCTTCCTCATCTCCACCGTG
CTGAAGGAGTTCAAAAACGCCCTATTCTTCCCATCGATTGTCCGCCAGTA
TATCAGCGATTTCTCCGTTCTCATCGCGATTTTCGCCATGAGTTTCTTCG
ACTATTCGCTGGGAGTTCCCACCCAGAAACTGGAGGTACCCAACGAGCTG
AAGCCCACGCTAAGCACCAGAGGCTGGCTCATCCCGCCGTTCGTCGAGAA
GAATCCCTGGTGGTCGGCGATCATTGCCGTATTCCCTGCCCTTCTCGGAA
CCATCCTGATCTTCATGGACCAGCAGATCACGGCCGTTATTGTGAACCGA
AAGGAGAACAAACTGAAGAAGGGATGTGGCTACCATCTGGATCTGTTCAT
TCTCTCCATTCTGATTGCCATCTGCAGCATGATGGGTCTGCCTTGGTTCG
TGGCCGCCACCGTGCTGAGCATCAACCACGTGAACTCGCTGAAACTGGAG
TCGGAGTGCTCGGCCCCTGGTGAGAAGCCACAGTTCCTGGGAGTGCGCGA
GCAGCGGGTGACCCACATCTTGATCTTCCTGACCATCGGCGTCTCCGTGC
TGTTGACCCCGCTGCTCGGTAACATTCCTATGCCGGTTCTTTTCGGTGTC
TTTCTGTATATGGGCGTGGCCTCACTCAAGGGCTTACAGTTCTTCGATCG
CATACTGATTATGTTCATGCCGGCGAAGTACCAGCCAGACTATATGTTCC
TGCGCCAGGTTCCCATTAAACGCGTCCACCTGTTCACCATGATCCAGCTG
GCCTGCCTCATAATTCTCTGGCTGATCAAGTCCTTCTCACAGACATCCAT
TCTGTTTCCCCTGATGTTGGTGGTGATGATTGGCATCAGAAAGGCCCTGG
ATCTGGTGTTCACTCGGCGCGAGCTGAAGATCCTGGACGACATAATGCCG
GAGATGACGAAGCGTGCGGCGGCGGATGATCTGCATAAACTGGACGCTGA
GGTGGGCTTATTGGCGCGCATTTTCCCCTGGGGAAAAGGCAGCCGGAGCA
GGGTGGTGACCAAGCCGCCGGGCCTTGATGATGGAATCGTTGGGTCTGGT
GGTGCCGTTGGCGCTGGACTCATCACTTGCACCACCTCAAATGCAAATGA
GAAGGAGTTCGAGGCACAGAGTAGTCTGCTCAAAAAGTAGAAGCACACAC
CTAGACAAGCACACCAACCAACCATTGAACACAACCACAAACACACCAAC
ACCAACACAACGCAGCCCAAACAAAAGAGAAATGAAAATCCCACGGACCA
GTGCTGCCCATTTCATTTGCGTTTGCAGTGCTGCCCAGTCCACGGCACAA
AACCAACGATAAACTCAATTATTTATAGATTTTTTTAATAATTTGCATTT
TGTCGGCCTTGATACATTTTATTGAACTAGTTATCTATCCATACGTATGC
ATTATTCCCTGTTATATACGTTTTTATCATGTCTTTAACAGTATTTTGTA
AATGTTTTTCCCCCCTACCCATTAATAATAATGGCATGCAGCTACTTTGC
ATTTTGTTTTTATATGTACGATTTGATTTAACTTCTTTTTGATTCTATGC
TAAAGAAAATCGCTTTTAAACCACCTGTAAATGCCAAACTTACAAAAACA
AAAAAAAAAAAAAA

RE52535.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:42:25
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 7228665..7229612 2342..1395 4725 99.9 Minus
chr2L 23010047 chr2L 7225470..7226361 4047..3156 4430 99.8 Minus
chr2L 23010047 chr2L 7228106..7228612 2847..2341 2475 99.2 Minus
chr2L 23010047 chr2L 7233539..7234011 1101..629 2365 100 Minus
chr2L 23010047 chr2L 7239205..7239523 319..1 1595 100 Minus
chr2L 23010047 chr2L 7227710..7228025 3160..2845 1580 100 Minus
chr2L 23010047 chr2L 7229901..7230195 1396..1102 1460 99.7 Minus
chr2L 23010047 chr2L 7235157..7235364 630..423 1040 100 Minus
chr2L 23010047 chr2L 7236698..7236802 424..320 525 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:42:23
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7229653..7230600 2342..1395 4740 100 Minus
2L 23513712 2L 7226441..7227349 4064..3156 4530 99.9 Minus
2L 23513712 2L 7229094..7229600 2847..2341 2535 100 Minus
2L 23513712 2L 7234527..7234999 1101..629 2365 100 Minus
2L 23513712 2L 7240182..7240500 319..1 1595 100 Minus
2L 23513712 2L 7228698..7229013 3160..2845 1580 100 Minus
2L 23513712 2L 7230889..7231183 1396..1102 1475 100 Minus
2L 23513712 2L 7236145..7236352 630..423 1040 100 Minus
2L 23513712 2L 7237686..7237790 424..320 525 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:12:22
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7229653..7230600 2342..1395 4740 100 Minus
2L 23513712 2L 7226441..7227349 4064..3156 4530 99.8 Minus
2L 23513712 2L 7229094..7229600 2847..2341 2535 100 Minus
2L 23513712 2L 7234527..7234999 1101..629 2365 100 Minus
2L 23513712 2L 7240182..7240500 319..1 1595 100 Minus
2L 23513712 2L 7228698..7229013 3160..2845 1580 100 Minus
2L 23513712 2L 7230889..7231183 1396..1102 1475 100 Minus
2L 23513712 2L 7236145..7236352 630..423 1040 100 Minus
2L 23513712 2L 7237686..7237790 424..320 525 100 Minus
Blast to na_te.dros performed on 2019-03-15 10:42:23 has no hits.

RE52535.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:43:03 Download gff for RE52535.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 7225468..7226358 3159..4049 96 <- Minus
chr2L 7227712..7228024 2846..3158 100 <- Minus
chr2L 7228108..7228610 2343..2845 99 <- Minus
chr2L 7228665..7229610 1397..2342 96 <- Minus
chr2L 7229901..7230195 1102..1396 99 <- Minus
chr2L 7233539..7234009 631..1101 100 <- Minus
chr2L 7235157..7235193 594..630 100 == Minus
chr2L 7235273..7235363 424..514 100 <- Minus
chr2L 7236699..7236802 320..423 100 <- Minus
chr2L 7239205..7239523 1..319 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-06-10 10:47:46 Download gff for RE52535.complete
Subject Subject Range Query Range Percent Splice Strand
Ndae1-RB 1..3300 291..3590 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:23:34 Download gff for RE52535.complete
Subject Subject Range Query Range Percent Splice Strand
Ndae1-RB 1..3300 291..3590 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:10:15 Download gff for RE52535.complete
Subject Subject Range Query Range Percent Splice Strand
Ndae1-RB 1..3300 291..3590 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-10 10:47:46 Download gff for RE52535.complete
Subject Subject Range Query Range Percent Splice Strand
Ndae1-RB 1..3668 1..3668 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:23:34 Download gff for RE52535.complete
Subject Subject Range Query Range Percent Splice Strand
Ndae1-RB 4..4046 1..4043 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:10:15 Download gff for RE52535.complete
Subject Subject Range Query Range Percent Splice Strand
Ndae1-RB 4..4046 1..4043 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:43:03 Download gff for RE52535.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7228700..7229012 2846..3158 100 <- Minus
2L 7230889..7231183 1102..1396 100 <- Minus
2L 7229096..7229598 2343..2845 100 <- Minus
2L 7229653..7230598 1397..2342 100 <- Minus
2L 7226456..7227346 3159..4049 99 <- Minus
2L 7234527..7234997 631..1101 100 <- Minus
2L 7236145..7236351 424..630 100 <- Minus
2L 7237687..7237790 320..423 100 <- Minus
2L 7240182..7240500 1..319 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:43:03 Download gff for RE52535.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7228700..7229012 2846..3158 100 <- Minus
2L 7230889..7231183 1102..1396 100 <- Minus
2L 7229096..7229598 2343..2845 100 <- Minus
2L 7229653..7230598 1397..2342 100 <- Minus
2L 7226456..7227346 3159..4049 99 <- Minus
2L 7234527..7234997 631..1101 100 <- Minus
2L 7236145..7236351 424..630 100 <- Minus
2L 7237687..7237790 320..423 100 <- Minus
2L 7240182..7240500 1..319 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:43:03 Download gff for RE52535.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7228700..7229012 2846..3158 100 <- Minus
2L 7230889..7231183 1102..1396 100 <- Minus
2L 7229096..7229598 2343..2845 100 <- Minus
2L 7229653..7230598 1397..2342 100 <- Minus
2L 7226456..7227346 3159..4049 99 <- Minus
2L 7234527..7234997 631..1101 100 <- Minus
2L 7236145..7236351 424..630 100 <- Minus
2L 7237687..7237790 320..423 100 <- Minus
2L 7240182..7240500 1..319 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:23:34 Download gff for RE52535.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7230889..7231183 1102..1396 100 <- Minus
arm_2L 7240182..7240500 1..319 100   Minus
arm_2L 7234527..7234997 631..1101 100 <- Minus
arm_2L 7236145..7236351 424..630 100 <- Minus
arm_2L 7237687..7237790 320..423 100 <- Minus
arm_2L 7226456..7227346 3159..4049 99 <- Minus
arm_2L 7228700..7229012 2846..3158 100 <- Minus
arm_2L 7229096..7229598 2343..2845 100 <- Minus
arm_2L 7229653..7230598 1397..2342 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:08:22 Download gff for RE52535.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7226456..7227346 3159..4049 99 <- Minus
2L 7228700..7229012 2846..3158 100 <- Minus
2L 7229096..7229598 2343..2845 100 <- Minus
2L 7229653..7230598 1397..2342 100 <- Minus
2L 7230889..7231183 1102..1396 100 <- Minus
2L 7234527..7234997 631..1101 100 <- Minus
2L 7236145..7236351 424..630 100 <- Minus
2L 7237687..7237790 320..423 100 <- Minus
2L 7240182..7240500 1..319 100   Minus

RE52535.pep Sequence

Translation from 290 to 3589

> RE52535.pep
MAEKNEYIELPWTMNSSSGDDEAPKDPRTGGEDFTQQFTENDFEGHRAHT
VYVGVHVPGGRRHSQRRRKHHHSGPGGGGGGGGGGGSIGGSGSVGGGAGK
DNVSEKQQEVERPVTPPAQRVQFILGEDVDDGTHVSHPLFSEMGMLVKEG
DEIEWKETARWIKFEEDVEEGGNRWSKPHVATLSLHSLFELRRLLVNGSV
MLDMEAQNLEVMADLVCDHMVSAGTLPPGVKDKVKDALLRRHRHQHEYAK
KTRLPIIRSLADMRNHSSSKKKKSNSKHSRPAQNLSSITEDMVKSPSNQS
MARPGSGTELSEQQHKGNTHFMRKIPPGAEASNILVGEVDFLERTLSCFI
RLSQAVVLGDLTEVPVPTRFVFILLGPPGSQSNFHEIGRAMATLMSDEIF
HEVAYRARKRDHLLSGVDEFLDAVTVLPPGEWDPTIRIEPPAAIPSQEVR
KRPPELPKEEVDEEEEEARLREENGLSRTGRLFGGLINDIKRKAPWYISD
YKDALSMQCVASWIFLYFACLSPIITFGGLLAEATGKHMAAMESLVSGFV
CGMGYGFFSGQPLTILGSTGPVLVFESIIYEFCLKMGWDYMTFRFWIGMW
VAGICIVLTAIDASALVCYITRFTEENFATLIAFIFIYKAIENVMVIGKN
FPVNQGIYDCVCTPPIGSNASVIDYAKYNWDSCESYNGTLVGGDCGTPPT
ENVFLMSVVLCAGTFLISTVLKEFKNALFFPSIVRQYISDFSVLIAIFAM
SFFDYSLGVPTQKLEVPNELKPTLSTRGWLIPPFVEKNPWWSAIIAVFPA
LLGTILIFMDQQITAVIVNRKENKLKKGCGYHLDLFILSILIAICSMMGL
PWFVAATVLSINHVNSLKLESECSAPGEKPQFLGVREQRVTHILIFLTIG
VSVLLTPLLGNIPMPVLFGVFLYMGVASLKGLQFFDRILIMFMPAKYQPD
YMFLRQVPIKRVHLFTMIQLACLIILWLIKSFSQTSILFPLMLVVMIGIR
KALDLVFTRRELKILDDIMPEMTKRAAADDLHKLDAEVGLLARIFPWGKG
SRSRVVTKPPGLDDGIVGSGGAVGAGLITCTTSNANEKEFEAQSSLLKK*

RE52535.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 18:58:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14032-PA 1092 GF14032-PA 1..1092 1..1098 5242 93.6 Plus
Dana\GF24675-PA 1292 GF24675-PA 533..1271 318..1016 1310 38 Plus
Dana\GF19014-PA 175 GF19014-PA 36..175 946..1092 553 77.6 Plus
Dana\GF24675-PA 1292 GF24675-PA 277..391 134..248 288 48.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:58:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23542-PA 1190 GG23542-PA 362..1190 271..1099 4348 98.3 Plus
Dere\GG23542-PA 1190 GG23542-PA 1..282 1..279 1458 96.8 Plus
Dere\GG15410-PA 1270 GG15410-PA 503..1248 318..1016 1320 38.6 Plus
Dere\GG15410-PA 1270 GG15410-PA 255..369 134..248 288 48.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 18:58:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13153-PA 1159 GH13153-PA 344..1159 281..1099 3737 87.5 Plus
Dgri\GH15430-PA 1270 GH15430-PA 512..1248 318..1016 1309 38.3 Plus
Dgri\GH13153-PA 1159 GH13153-PA 1..253 14..270 1149 85.2 Plus
Dgri\GH17998-PA 229 GH17998-PA 1..207 809..1016 496 45.7 Plus
Dgri\GH15430-PA 1270 GH15430-PA 258..385 134..268 290 45.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:10:07
Subject Length Description Subject Range Query Range Score Percent Strand
Ndae1-PB 1099 CG4675-PB 1..1099 1..1099 5747 100 Plus
Ndae1-PE 1086 CG42253-PE 1..1086 14..1099 5674 100 Plus
Ndae1-PI 1126 CG42253-PI 1..1126 1..1099 5629 96.7 Plus
Ndae1-PC 1190 CG31906-PA 1..1037 1..1037 5430 100 Plus
Ndae1-PD 1134 CG42253-PD 1..1024 14..1037 5357 100 Plus
Ndae1-PA 1030 CG4675-PA 30..1030 99..1099 5129 98.7 Plus
Ndae1-PF 1027 CG42253-PF 46..1027 99..1099 5005 96.8 Plus
Ndae1-PH 1053 CG42253-PH 30..1053 99..1099 5002 95 Plus
Ndae1-PG 1067 CG42253-PG 30..1067 99..1099 4988 93.7 Plus
Ndae1-PJ 1046 CG42253-PJ 30..1024 99..1037 4720 92.8 Plus
CG8177-PM 1210 CG8177-PM 263..1188 134..1016 1533 38.1 Plus
CG8177-PH 1201 CG8177-PH 254..1179 134..1016 1533 38.1 Plus
CG8177-PD 1161 CG8177-PD 214..1139 134..1016 1533 38.1 Plus
CG8177-PB 1201 CG8177-PB 254..1179 134..1016 1533 38.1 Plus
CG8177-PF 1201 CG8177-PF 254..1179 134..1016 1533 38.1 Plus
CG8177-PC 1201 CG8177-PC 254..1179 134..1016 1533 38.1 Plus
CG8177-PJ 1166 CG8177-PJ 219..1144 134..1016 1533 38.1 Plus
CG8177-PI 1201 CG8177-PI 254..1179 134..1016 1533 38.1 Plus
CG8177-PE 1228 CG8177-PE 214..1206 134..1016 1470 36.3 Plus
CG8177-PA 1268 CG8177-PA 254..1246 134..1016 1470 36.3 Plus
CG8177-PG 1268 CG8177-PG 254..1246 134..1016 1470 36.3 Plus
CG8177-PK 1233 CG8177-PK 219..1211 134..1016 1470 36.3 Plus
CG8177-PL 371 CG8177-PL 214..328 134..248 284 48.7 Plus
Ndae1-PA 1030 CG4675-PA 1..44 1..44 241 100 Plus
Ndae1-PH 1053 CG42253-PH 1..44 1..44 241 100 Plus
Ndae1-PG 1067 CG42253-PG 1..44 1..44 241 100 Plus
Ndae1-PJ 1046 CG42253-PJ 1..44 1..44 241 100 Plus
Ndae1-PF 1027 CG42253-PF 27..60 11..44 191 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 18:58:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17795-PA 1103 GI17795-PA 1..1103 14..1099 4864 83.1 Plus
Dmoj\GI13032-PA 1251 GI13032-PA 510..1225 318..1001 1271 38.5 Plus
Dmoj\GI13032-PA 1251 GI13032-PA 257..371 134..248 287 48.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:58:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19233-PA 1197 GL19233-PA 1..1136 1..1099 4929 85 Plus
Dper\GL16294-PA 812 GL16294-PA 478..791 702..1016 636 43.2 Plus
Dper\GL16294-PA 812 GL16294-PA 150..509 318..650 579 36.2 Plus
Dper\GL16293-PA 331 GL16293-PA 236..323 134..221 243 51.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:58:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18347-PA 1098 GA18347-PA 1..1098 1..1099 5053 90.7 Plus
Dpse\GA20870-PA 1273 GA20870-PA 511..1252 318..1016 1309 39 Plus
Dpse\GA20870-PA 1273 GA20870-PA 261..375 134..248 288 48.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:58:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13591-PA 1188 GM13591-PA 360..1188 271..1099 4361 98.7 Plus
Dsec\GM25184-PA 1271 GM25184-PA 257..1249 134..1016 1521 36.3 Plus
Dsec\GM13591-PA 1188 GM13591-PA 1..280 1..279 1477 97.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:58:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22503-PA 1136 GD22503-PA 1..1136 1..1099 5713 95 Plus
Dsim\GD17941-PA 191 GD17941-PA 129..191 875..937 206 60.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 18:58:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17618-PA 1076 GJ17618-PA 1..1076 14..1099 4922 88.3 Plus
Dvir\GJ12127-PA 1263 GJ12127-PA 509..1242 318..1016 1301 38.9 Plus
Dvir\GJ12127-PA 1263 GJ12127-PA 257..371 134..248 293 49.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 18:58:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24730-PA 1102 GK24730-PA 1..1102 1..1099 4984 89 Plus
Dwil\GK10968-PA 1265 GK10968-PA 508..1244 318..1016 1307 38.1 Plus
Dwil\GK10968-PA 1265 GK10968-PA 258..372 134..248 288 48.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:58:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18368-PA 1237 GE18368-PA 409..1237 271..1099 4324 97.7 Plus
Dyak\GE18368-PA 1237 GE18368-PA 1..284 1..279 1451 96.1 Plus
Dyak\GE21718-PA 1272 GE21718-PA 505..1250 318..1016 1318 38.5 Plus
Dyak\GE21718-PA 1272 GE21718-PA 257..371 134..248 288 48.7 Plus

RE52535.hyp Sequence

Translation from 290 to 3589

> RE52535.hyp
MAEKNEYIELPWTMNSSSGDDEAPKDPRTGGEDFTQQFTENDFEGHRAHT
VYVGVHVPGGRRHSQRRRKHHHSGPGGGGGGGGGGGSIGGSGSVGGGAGK
DNVSEKQQEVERPVTPPAQRVQFILGEDVDDGTHVSHPLFSEMGMLVKEG
DEIEWKETARWIKFEEDVEEGGNRWSKPHVATLSLHSLFELRRLLVNGSV
MLDMEAQNLEVMADLVCDHMVSAGTLPPGVKDKVKDALLRRHRHQHEYAK
KTRLPIIRSLADMRNHSSSKKKKSNSKHSRPAQNLSSITEDMVKSPSNQS
MARPGSGTELSEQQHKGNTHFMRKIPPGAEASNILVGEVDFLERTLSCFI
RLSQAVVLGDLTEVPVPTRFVFILLGPPGSQSNFHEIGRAMATLMSDEIF
HEVAYRARKRDHLLSGVDEFLDAVTVLPPGEWDPTIRIEPPAAIPSQEVR
KRPPELPKEEVDEEEEEARLREENGLSRTGRLFGGLINDIKRKAPWYISD
YKDALSMQCVASWIFLYFACLSPIITFGGLLAEATGKHMAAMESLVSGFV
CGMGYGFFSGQPLTILGSTGPVLVFESIIYEFCLKMGWDYMTFRFWIGMW
VAGICIVLTAIDASALVCYITRFTEENFATLIAFIFIYKAIENVMVIGKN
FPVNQGIYDCVCTPPIGSNASVIDYAKYNWDSCESYNGTLVGGDCGTPPT
ENVFLMSVVLCAGTFLISTVLKEFKNALFFPSIVRQYISDFSVLIAIFAM
SFFDYSLGVPTQKLEVPNELKPTLSTRGWLIPPFVEKNPWWSAIIAVFPA
LLGTILIFMDQQITAVIVNRKENKLKKGCGYHLDLFILSILIAICSMMGL
PWFVAATVLSINHVNSLKLESECSAPGEKPQFLGVREQRVTHILIFLTIG
VSVLLTPLLGNIPMPVLFGVFLYMGVASLKGLQFFDRILIMFMPAKYQPD
YMFLRQVPIKRVHLFTMIQLACLIILWLIKSFSQTSILFPLMLVVMIGIR
KALDLVFTRRELKILDDIMPEMTKRAAADDLHKLDAEVGLLARIFPWGKG
SRSRVVTKPPGLDDGIVGSGGAVGAGLITCTTSNANEKEFEAQSSLLKK*

RE52535.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:10:47
Subject Length Description Subject Range Query Range Score Percent Strand
Ndae1-PB 1099 CG4675-PB 1..1099 1..1099 5747 100 Plus
Ndae1-PE 1086 CG42253-PE 1..1086 14..1099 5674 100 Plus
Ndae1-PI 1126 CG42253-PI 1..1126 1..1099 5629 96.7 Plus
Ndae1-PC 1190 CG31906-PA 1..1037 1..1037 5430 100 Plus
Ndae1-PD 1134 CG42253-PD 1..1024 14..1037 5357 100 Plus