Clone RE52725 Report

Search the DGRC for RE52725

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:527
Well:25
Vector:pFlc-1
Associated Gene/Transcriptmspo-RA
Protein status:RE52725.pep: gold
Preliminary Size:2574
Sequenced Size:2589

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10145 2002-01-01 Sim4 clustering to Release 2
CG18373 2002-01-01 Sim4 clustering to Release 2
CG10145 2002-02-26 Blastp of sequenced clone
CG10145 2003-01-01 Sim4 clustering to Release 3
mspo 2008-04-29 Release 5.5 accounting
mspo 2008-08-15 Release 5.9 accounting
mspo 2008-12-18 5.12 accounting

Clone Sequence Records

RE52725.complete Sequence

2589 bp (2589 high quality bases) assembled on 2002-02-26

GenBank Submission: AY084178

> RE52725.complete
CAGTCCGCGACGAACTCTCAACGCGGGCGGTTGTGTAGAATCTGTGGCAA
GTTCTTGCTCCATTCGCACCCATATCGAATTTATTGAGCTTGCTGCGCGC
CAAAAGTCCAAAAAGTGAAGAAAACGCAGAGCGTACAAAGTTGGAGAAAC
CAAAAATAAATATGTGAATGCCGCGAGTGTGTGTGTGCGTTTATTTTTAA
GCGACGGCCCCCGAAGGCAAATGTGAAGTGTAAGCGGCAAACAAAATACA
AAAAAAAAGCAAAAAAGATAAGTAAAGAGCGAGAAATATAAATTATATCA
AAACAAAAATAGCCGCCAGAAGGCAAGCGAATTAGCACGCAACATTTGAC
GAAATGGGAGCGACACCGAAAACAGACTTTCCGGCTCACTGGCTGCTGTG
TATCCTTCTGGCTCTCGGCTCCTTATCCTCGAAAGCGAATGCCGTTAGTG
CTTATGGCGCCTCCTTCATTTCGAACCCATCCATATATGCATACAGTGTC
GAAAATCAGCCGGATGAACGCGAGTCCAGGGACAACAACATCAAGTTTGC
CGCTGAGCACGGCAATCTGAATTCCAATTCCAATCTGAATCGTAATTACT
ACTACACCGATGATCCCAGTCCCGTTTCCAATCTGAATCCGACTGCCTCG
CTGGCCACGCCTCCCGCCACCCAGCCCGCCCCGCAGACGGGCTGCACCCT
GGACCGCCTGGCCGTCTACAAGGTCGTCTTGCACACCTACTGGACCCGGG
AGCTCTTCCCCAAGCACTATCCCGACTGGCGACCCACCGCCCAGTGGACC
AAGACATTAGGTCGCACCCACAATGCCAACTATGCACTGTACCACATTGG
ACAACCGGCGACGGCGGCTGTCAAACAGTTTGCGGAATCGGGACGAACGG
ATCTGCTGGACAGCAATGCCGGCGAGCAGCAGCAGGTCCAGATGCAGCTG
CAGTCGCAGATGCAGGCGGGCAAATCCCCATCAGGTGGGATCAGCAGCGG
CACGACTAGTTTCAACGCCACAGCCGCATCCACAGCCACACCCACTGGTG
GTAGTGGTGGCAGCGGTGGCAGCGGTGGCAGCGGTGGCACTGGCACCACC
ACCGCCGAGCGCAGCGTGTTCGATGAGTTCAGCATGCCGGCGATTCCGAT
GGGCGCCGGACGCAGTGAGGCAAAAGTGTTTGTCGACAGCAATCACAGTC
TGGTCTCGCTAATGACACGCATTGTTCCCTCGCCGGACTGGTTCATCGGC
GTGGATTCGTTCGAGCTCTGCGTGGGTGGCTCCTGGATCGATACGGTGAC
CGTTGAGCTGGATCCTTTGGATGCGGGCACGGATAATGGCTTCACCTTCA
CGGCGCCCAACTGGCCAACAGAACCTCAGGGCGTCATCTATCGGATCACC
TCGCGTTATCCTGGACATCCTGCGGGTAGCTTTTATTATCCGAAGAGCAA
ACGATTGCCGCCCATCGCCACGTTCCAGTTTATCAAGCTGAAGGAGTACG
AGCTGAGCGAGGTGTTTAACATTGCCGAGGACGATCGCAAGTACGAGACG
GTCCAGACCCAGACCCACCTGGACGCGGAGCACAATCACGTGGAGATGAA
CAACGAGTTGTCCGCCAGCATCGAACGGGAACGACAAACGGAGCAGCAGC
AGTTGCAGCAGAACGACGACGAGAGGCAGCGCATTCGGTCCCAGCTGTTG
GCCAAAATGAATCCCATCTATGGCAGCAACAACAGCCTGCAGCCGGCACC
TGGTCAGGTGGTCAGTGTGGTGCCGAAGAACGACAAGCATGCGATCCTGC
AGAGCATCGCCAGCAGCTATCGGCGTGCCGCAGATGCCAGCGATGCAAAC
GCCTCCAAACCGACACCATCCGCGATTGGTGGTGGCAAGGCCGGTGGTGC
GGTGGGCGGTGGTGCTGCCACCCGCAGGCGGAGCTCCGCGCAGCGTCGTC
GTGATTGCCGCGTGAGCCACTGGTCCGAGTGGACGGCCTGCAGCAAAAGT
TGCGGCGTCGGCGAGATGCATCGCTACCGCAAGGTCATAAAGCACGGCAA
GAGGGGCGGACGACAGTGCCCGGCGCTCCAGCAGTCCAAGTGGTGCGGCA
CCGAGCGCAACTGTCACGGGTCGCAGACCTATTTTAATTGGTCCGATTCC
GACACATGAACGATCCACTTGGCGGAGGCACAGGCGATATAAATATAATT
TTAATTTAAGGCGTAAGAATTGCTTTTTCTGTGTGAACAAGAAAGACCAG
CCAGGCCGTTAGGAGTGTGGTTCATCCCGCAAGGAGATTTTAATTTAACT
TTACATTATCAAATGACATTGTTTTTAACGCAGACGGCAGAGACTTCAAT
TAAAAATGGATTAAATTAGAGGCGACGATGGGGAAGACTACTGACAATAT
TAAAAAACACAAGAAAGATTTAGACACAGGACACAGAGGATTGGAGTCAT
TCGTCCTGCGGATGTCGATTCAAACATTCTTATGTTTATGTGTTCACATT
GATTTATATTTTTTTTTTCGTTGCTTTAGCTCTAAATAATATGTAAAAAA
ATCATCATAAAATATAAAAAATGCAAAAAAAAAAAAAAA

RE52725.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:23:58
Subject Length Description Subject Range Query Range Score Percent Strand
mspo.a 2849 mspo.a 17..2602 1..2586 12900 99.9 Plus
mspo-RA 2673 mspo-RA 101..2673 1..2573 12865 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 03:40:14
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 10600101..10600912 812..1 4030 99.8 Minus
chr2R 21145070 chr2R 10559949..10560373 2142..1718 2080 99.3 Minus
chr2R 21145070 chr2R 10559256..10559689 2573..2140 2045 99.1 Minus
chr2R 21145070 chr2R 10571444..10571882 1265..809 1980 96.1 Minus
chr2R 21145070 chr2R 10567241..10567472 1717..1486 1160 100 Minus
chr2R 21145070 chr2R 10570846..10571073 1491..1264 1095 98.7 Minus
chrU 10048995 chrU 4717325..4717371 1047..1093 190 93.6 Plus
chrU 10048995 chrU 6021201..6021243 1089..1047 185 95.3 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:01:46 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 03:40:12
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 14712810..14713621 812..1 4060 100 Minus
2R 25286936 2R 14684153..14684609 1265..809 2285 100 Minus
2R 25286936 2R 14671940..14672386 2586..2140 2205 99.6 Minus
2R 25286936 2R 14672652..14673076 2142..1718 2125 100 Minus
2R 25286936 2R 14679943..14680174 1717..1486 1160 100 Minus
2R 25286936 2R 14683545..14683772 1491..1264 1125 99.6 Minus
Xmm 1049845 Xmm 780128..780174 1047..1093 190 93.6 Plus
Xmm 1049845 Xmm 745118..745160 1089..1047 185 95.3 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:53:09
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 14714009..14714820 812..1 4060 100 Minus
2R 25260384 2R 14685352..14685808 1265..809 2285 100 Minus
2R 25260384 2R 14673139..14673585 2586..2140 2205 99.5 Minus
2R 25260384 2R 14673851..14674275 2142..1718 2125 100 Minus
2R 25260384 2R 14681142..14681373 1717..1486 1160 100 Minus
2R 25260384 2R 14684744..14684971 1491..1264 1125 99.5 Minus
Unimproved_211000022238705_42_971 929 Unimproved_211000022238705_42_971 500..546 1093..1047 190 93.6 Minus
Blast to na_te.dros performed 2019-03-16 03:40:13
Subject Length Description Subject Range Query Range Score Percent Strand
R1A1-element 5356 R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). 679..721 1085..1043 161 86 Minus
R1A1-element 5356 R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). 684..717 1089..1056 152 94.1 Minus
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 631..777 995..849 144 61.5 Minus
R1A1-element 5356 R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). 689..722 1093..1060 134 88.2 Minus
Idefix 7411 Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). 503..623 2248..2130 123 60.5 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2325..2371 1616..1663 120 75 Plus

RE52725.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 03:41:13 Download gff for RE52725.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 10571444..10571619 1090..1265 100 == Minus
chr2R 10559255..10559688 2141..2574 93 <- Minus
chr2R 10559951..10560373 1718..2140 99 <- Minus
chr2R 10567241..10567470 1488..1717 100 <- Minus
chr2R 10570850..10571071 1266..1487 99 <- Minus
chr2R 10571649..10571880 811..1042 100 <- Minus
chr2R 10600103..10600912 1..810 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:02:57 Download gff for RE52725.complete
Subject Subject Range Query Range Percent Splice Strand
mspo-RA 1..1806 354..2159 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:34:50 Download gff for RE52725.complete
Subject Subject Range Query Range Percent Splice Strand
mspo-RA 1..1806 354..2159 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:47:37 Download gff for RE52725.complete
Subject Subject Range Query Range Percent Splice Strand
mspo-RA 1..1806 354..2159 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:06:48 Download gff for RE52725.complete
Subject Subject Range Query Range Percent Splice Strand
mspo-RA 1..1806 354..2159 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:10:50 Download gff for RE52725.complete
Subject Subject Range Query Range Percent Splice Strand
mspo-RA 1..1806 354..2159 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:02:56 Download gff for RE52725.complete
Subject Subject Range Query Range Percent Splice Strand
mspo-RA 1..2573 1..2574 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:34:50 Download gff for RE52725.complete
Subject Subject Range Query Range Percent Splice Strand
mspo-RA 1..2573 1..2574 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:47:37 Download gff for RE52725.complete
Subject Subject Range Query Range Percent Splice Strand
mspo-RA 2..2574 1..2573 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:06:49 Download gff for RE52725.complete
Subject Subject Range Query Range Percent Splice Strand
mspo-RA 1..2573 1..2574 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:10:50 Download gff for RE52725.complete
Subject Subject Range Query Range Percent Splice Strand
mspo-RA 2..2574 1..2573 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:41:13 Download gff for RE52725.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14672654..14673076 1718..2140 100 <- Minus
2R 14679943..14680172 1488..1717 100 <- Minus
2R 14683549..14683770 1266..1487 100 <- Minus
2R 14671952..14672385 2141..2574 99 <- Minus
2R 14684153..14684607 811..1265 100 <- Minus
2R 14712812..14713621 1..810 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:41:13 Download gff for RE52725.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14672654..14673076 1718..2140 100 <- Minus
2R 14679943..14680172 1488..1717 100 <- Minus
2R 14683549..14683770 1266..1487 100 <- Minus
2R 14671952..14672385 2141..2574 99 <- Minus
2R 14684153..14684607 811..1265 100 <- Minus
2R 14712812..14713621 1..810 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:41:13 Download gff for RE52725.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14672654..14673076 1718..2140 100 <- Minus
2R 14679943..14680172 1488..1717 100 <- Minus
2R 14683549..14683770 1266..1487 100 <- Minus
2R 14671952..14672385 2141..2574 99 <- Minus
2R 14684153..14684607 811..1265 100 <- Minus
2R 14712812..14713621 1..810 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:47:37 Download gff for RE52725.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 10567448..10567677 1488..1717 100 <- Minus
arm_2R 10571054..10571275 1266..1487 100 <- Minus
arm_2R 10559457..10559890 2141..2574 99 <- Minus
arm_2R 10560159..10560581 1718..2140 100 <- Minus
arm_2R 10571658..10572112 811..1265 100 <- Minus
arm_2R 10600317..10601126 1..810 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:40:39 Download gff for RE52725.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14673151..14673584 2141..2574 99 <- Minus
2R 14673853..14674275 1718..2140 100 <- Minus
2R 14681142..14681371 1488..1717 100 <- Minus
2R 14684748..14684969 1266..1487 100 <- Minus
2R 14685352..14685806 811..1265 100 <- Minus
2R 14714011..14714820 1..810 100   Minus

RE52725.pep Sequence

Translation from 353 to 2158

> RE52725.pep
MGATPKTDFPAHWLLCILLALGSLSSKANAVSAYGASFISNPSIYAYSVE
NQPDERESRDNNIKFAAEHGNLNSNSNLNRNYYYTDDPSPVSNLNPTASL
ATPPATQPAPQTGCTLDRLAVYKVVLHTYWTRELFPKHYPDWRPTAQWTK
TLGRTHNANYALYHIGQPATAAVKQFAESGRTDLLDSNAGEQQQVQMQLQ
SQMQAGKSPSGGISSGTTSFNATAASTATPTGGSGGSGGSGGSGGTGTTT
AERSVFDEFSMPAIPMGAGRSEAKVFVDSNHSLVSLMTRIVPSPDWFIGV
DSFELCVGGSWIDTVTVELDPLDAGTDNGFTFTAPNWPTEPQGVIYRITS
RYPGHPAGSFYYPKSKRLPPIATFQFIKLKEYELSEVFNIAEDDRKYETV
QTQTHLDAEHNHVEMNNELSASIERERQTEQQQLQQNDDERQRIRSQLLA
KMNPIYGSNNSLQPAPGQVVSVVPKNDKHAILQSIASSYRRAADASDANA
SKPTPSAIGGGKAGGAVGGGAATRRRSSAQRRRDCRVSHWSEWTACSKSC
GVGEMHRYRKVIKHGKRGGRQCPALQQSKWCGTERNCHGSQTYFNWSDSD
T*

RE52725.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 23:16:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13520-PA 597 GF13520-PA 1..597 1..601 2138 74.2 Plus
Dana\GF11435-PA 761 GF11435-PA 285..553 271..575 288 27.1 Plus
Dana\GF12839-PA 869 GF12839-PA 168..389 106..383 264 26 Plus
Dana\GF12840-PA 918 GF12840-PA 278..544 269..590 237 25.3 Plus
Dana\GF12841-PA 852 GF12841-PA 280..402 262..383 235 36.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 23:16:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22407-PA 589 GG22407-PA 1..589 1..601 2626 92.1 Plus
Dere\GG20657-PA 762 GG20657-PA 285..635 271..590 279 25.3 Plus
Dere\GG20270-PA 873 GG20270-PA 172..393 106..383 273 26 Plus
Dere\GG20271-PA 907 GG20271-PA 144..399 79..387 246 26.7 Plus
Dere\GG20272-PA 840 GG20272-PA 280..402 262..383 223 35.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 23:16:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22917-PA 600 GH22917-PA 33..600 28..601 1952 70.3 Plus
Dgri\GH22804-PA 888 GH22804-PA 172..393 106..383 275 26.3 Plus
Dgri\GH22839-PA 769 GH22839-PA 290..555 271..573 272 27.6 Plus
Dgri\GH22806-PA 851 GH22806-PA 274..533 262..562 249 25.9 Plus
Dgri\GH22805-PA 881 GH22805-PA 148..402 80..387 242 26.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:12:39
Subject Length Description Subject Range Query Range Score Percent Strand
mspo-PB 601 CG10145-PB 1..601 1..601 3196 100 Plus
mspo-PA 601 CG10145-PA 1..601 1..601 3196 100 Plus
fat-spondin-PA 763 CG6953-PA 285..551 271..573 279 27.4 Plus
CG17739-PA 873 CG17739-PA 172..393 106..383 249 25.6 Plus
CG30046-PC 839 CG30046-PC 281..564 262..590 246 25.3 Plus
CG30046-PB 839 CG30046-PB 281..564 262..590 246 25.3 Plus
CG30203-PB 924 CG30203-PB 144..392 79..382 243 25.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 23:16:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18408-PA 593 GI18408-PA 14..593 14..601 2009 69.1 Plus
Dmoj\GI21218-PA 766 GI21218-PA 288..555 271..575 281 27.5 Plus
Dmoj\GI20599-PA 880 GI20599-PA 171..392 106..383 258 25.3 Plus
Dmoj\GI20600-PA 848 GI20600-PA 148..403 79..387 243 25.2 Plus
Dmoj\GI20601-PA 818 GI20601-PA 180..394 114..383 238 25.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 23:16:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10630-PA 1190 GL10630-PA 558..834 101..427 882 64 Plus
Dper\GL10632-PA 174 GL10632-PA 19..174 457..601 498 70.3 Plus
Dper\GL10818-PA 864 GL10818-PA 172..514 106..562 296 23.1 Plus
Dper\GL11519-PA 766 GL11519-PA 285..553 271..575 273 26.1 Plus
Dper\GL10820-PA 872 GL10820-PA 175..402 108..387 240 26.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 23:16:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10108-PA 619 GA10108-PA 37..619 30..601 1954 72.8 Plus
Dpse\GA24501-PA 864 GA24501-PA 172..514 106..562 296 23.1 Plus
Dpse\fat-spondin-PA 766 GA19979-PA 285..553 271..575 271 26.4 Plus
Dpse\GA24502-PA 869 GA24502-PA 175..402 108..387 241 26.7 Plus
Dpse\GA15603-PA 877 GA15603-PA 279..401 262..383 228 36.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 23:16:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20193-PA 590 GM20193-PA 1..590 1..601 3102 95.7 Plus
Dsec\GM21753-PA 763 GM21753-PA 285..553 271..575 282 27.5 Plus
Dsec\GM21355-PA 873 GM21355-PA 172..393 106..383 273 26 Plus
Dsec\GM21358-PA 839 GM21358-PA 281..403 262..383 214 35 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 23:16:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25664-PA 593 GD25664-PA 1..593 1..601 3111 95.7 Plus
Dsim\GD11244-PA 763 GD11244-PA 285..553 271..575 282 27.8 Plus
Dsim\GD10852-PA 873 GD10852-PA 172..393 106..383 273 26 Plus
Dsim\GD10853-PA 1361 GD10853-PA 144..400 79..388 249 26.3 Plus
Dsim\GD10853-PA 1361 GD10853-PA 698..925 99..383 230 25.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 23:16:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21488-PA 601 GJ21488-PA 34..601 32..601 1975 69.4 Plus
Dvir\GJ20783-PA 878 GJ20783-PA 172..393 106..383 272 26.3 Plus
Dvir\GJ20820-PA 770 GJ20820-PA 287..554 271..575 267 26.5 Plus
Dvir\GJ20785-PA 847 GJ20785-PA 272..394 262..383 238 38.2 Plus
Dvir\GJ20784-PA 868 GJ20784-PA 147..402 79..387 224 24.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 23:16:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19519-PA 573 GK19519-PA 62..573 87..601 1931 73.4 Plus
Dwil\GK21893-PA 879 GK21893-PA 172..514 106..562 309 23.9 Plus
Dwil\GK21894-PA 785 GK21894-PA 176..528 108..568 260 24.4 Plus
Dwil\GK17866-PA 730 GK17866-PA 254..398 271..420 251 34.4 Plus
Dwil\GK21895-PA 861 GK21895-PA 274..396 262..383 217 34.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 23:16:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12296-PA 597 GE12296-PA 1..597 1..601 2644 88.4 Plus
Dyak\GE11642-PA 763 GE11642-PA 285..553 271..575 280 27.1 Plus
Dyak\GE12428-PA 873 GE12428-PA 172..393 106..383 272 26 Plus
Dyak\GE12430-PA 834 GE12430-PA 179..402 106..383 264 25.4 Plus
Dyak\GE12429-PA 834 GE12429-PA 144..399 79..387 229 25.8 Plus

RE52725.hyp Sequence

Translation from 353 to 2158

> RE52725.hyp
MGATPKTDFPAHWLLCILLALGSLSSKANAVSAYGASFISNPSIYAYSVE
NQPDERESRDNNIKFAAEHGNLNSNSNLNRNYYYTDDPSPVSNLNPTASL
ATPPATQPAPQTGCTLDRLAVYKVVLHTYWTRELFPKHYPDWRPTAQWTK
TLGRTHNANYALYHIGQPATAAVKQFAESGRTDLLDSNAGEQQQVQMQLQ
SQMQAGKSPSGGISSGTTSFNATAASTATPTGGSGGSGGSGGSGGTGTTT
AERSVFDEFSMPAIPMGAGRSEAKVFVDSNHSLVSLMTRIVPSPDWFIGV
DSFELCVGGSWIDTVTVELDPLDAGTDNGFTFTAPNWPTEPQGVIYRITS
RYPGHPAGSFYYPKSKRLPPIATFQFIKLKEYELSEVFNIAEDDRKYETV
QTQTHLDAEHNHVEMNNELSASIERERQTEQQQLQQNDDERQRIRSQLLA
KMNPIYGSNNSLQPAPGQVVSVVPKNDKHAILQSIASSYRRAADASDANA
SKPTPSAIGGGKAGGAVGGGAATRRRSSAQRRRDCRVSHWSEWTACSKSC
GVGEMHRYRKVIKHGKRGGRQCPALQQSKWCGTERNCHGSQTYFNWSDSD
T*

RE52725.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:58:18
Subject Length Description Subject Range Query Range Score Percent Strand
mspo-PB 601 CG10145-PB 1..601 1..601 3196 100 Plus
mspo-PA 601 CG10145-PA 1..601 1..601 3196 100 Plus
fat-spondin-PA 763 CG6953-PA 285..551 271..573 279 27.4 Plus
CG17739-PA 873 CG17739-PA 172..393 106..383 249 25.6 Plus
CG30046-PC 839 CG30046-PC 281..564 262..590 246 25.3 Plus