RE52922.complete Sequence
1067 bp (1067 high quality bases) assembled on 2003-01-22
GenBank Submission: AY089636
> RE52922.complete
ATTTGTTGATTTGCTTTTGGAATATGTTGTAATATTATATTAAAATGACA
AAGTCGAGAATTTGCCGCACTTGCTTGGAAAGTCCGGAAGTCATGGTCAA
TTCATTTGATGTTCCACAAAATTTGGGATATAATATAATATTACCATATA
ATATATATCTTATCCCAGTGCATACAATATCCATTTTATAAAGGGGATTT
CCTACCCGAAACCATTTGTCTGCCGCGCCTAAAGGATGCCAAAAGTGCCT
TTAAGATAATTACAAAATGCAGAAGGAGTCACCAATTTCTCAAGGAATCT
GAAATAAAAGGTTGGTCGGATGAAAGGAAACGTTTGATCCACACTTCCAC
TTAGCCGCTAGCAATGAGCAGCAATTCCAAGTCGAGATGGAGGAGTTTGA
AACTAGTTTATCAATTTGAAAGTAGCAACGATTTCGGAACAGAAAGAGAT
GCAGAAGTCGACACCGGAGAAGGAGAGAATTCAAACCATGAGACTGAAGT
GCATCAGCCAGAGCAAGAGTCCACCGAGGATGAGCGATTCCAATGCCACG
TCAAGAATGAGTCCATCAACGAAGATCTCTCAGAGGAAGAAGATTACAGC
GAACTGAGCACATTAAGACTGGAGGACATTGAAGAGAATGTCCTCGAAGG
TACTCCTCGAATCGTTGAGATGCAGGATGACAGCAAAGTGCAACCAAACC
ACAAATACGTCAATGTAAAAATGTTTATTTTATATACATATAAATAAGGA
AATTAAGGATGTTATCTATGAAGATGTATTTTGATTTGTAAAGATCTATT
TGATAGTATTGTATGAGCTTGTGTTATGATACTAACAAGTGCTAGCAGAA
AAGTGATTTAAAATATTTAAAGAATAAGTGTAACTGCTCATGTCTGCGAT
TATTACTGACTTCTTTCTGTGAAACAAACTCGTAATGATGTATATATTTA
AGTGAACTAATGAAGTAGTTTGTTTTGAACTCGCATCGAAACGACTATTG
TAGCTACTTAACTCTGCTTTTCGAGGAATAAAACTGAGTGAAACTGCTGC
TAAAAAAAAAAAAAAAA
RE52922.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 18:24:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15345-RA | 1173 | CG15345-RA | 80..1130 | 1..1051 | 5255 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:20:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 8288895..8289900 | 1051..47 | 4815 | 98.8 | Minus |
chrX | 22417052 | chrX | 8289957..8290003 | 47..1 | 220 | 97.9 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:01:56 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:20:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8397154..8398162 | 1051..43 | 5030 | 99.9 | Minus |
X | 23542271 | X | 8398215..8398261 | 47..1 | 235 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:01:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 8405252..8406260 | 1051..43 | 5030 | 99.9 | Minus |
X | 23527363 | X | 8406313..8406359 | 47..1 | 235 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 19:20:56 has no hits.
RE52922.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 19:21:57 Download gff for
RE52922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 8288895..8289900 | 47..1051 | 98 | <- | Minus |
chrX | 8289958..8290003 | 1..46 | 97 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:22:17 Download gff for
RE52922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 1..384 | 364..747 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:54:29 Download gff for
RE52922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 1..384 | 364..747 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:27:07 Download gff for
RE52922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 1..384 | 364..747 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:45:34 Download gff for
RE52922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 1..384 | 364..747 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:27:48 Download gff for
RE52922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 1..384 | 364..747 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:09:28 Download gff for
RE52922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 1..1049 | 1..1049 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:54:29 Download gff for
RE52922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 1..1049 | 1..1049 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:27:07 Download gff for
RE52922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 38..1085 | 1..1048 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:45:34 Download gff for
RE52922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 1..1049 | 1..1049 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:27:48 Download gff for
RE52922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15345-RA | 38..1085 | 1..1048 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:21:57 Download gff for
RE52922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8397154..8398158 | 47..1051 | 100 | <- | Minus |
X | 8398216..8398261 | 1..46 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:21:57 Download gff for
RE52922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8397154..8398158 | 47..1051 | 100 | <- | Minus |
X | 8398216..8398261 | 1..46 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:21:57 Download gff for
RE52922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8397154..8398158 | 47..1051 | 100 | <- | Minus |
X | 8398216..8398261 | 1..46 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:27:07 Download gff for
RE52922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8291187..8292191 | 47..1051 | 100 | <- | Minus |
arm_X | 8292249..8292294 | 1..46 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:16:33 Download gff for
RE52922.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8405252..8406256 | 47..1051 | 100 | <- | Minus |
X | 8406314..8406359 | 1..46 | 100 | | Minus |
RE52922.hyp Sequence
Translation from 363 to 746
> RE52922.hyp
MSSNSKSRWRSLKLVYQFESSNDFGTERDAEVDTGEGENSNHETEVHQPE
QESTEDERFQCHVKNESINEDLSEEEDYSELSTLRLEDIEENVLEGTPRI
VEMQDDSKVQPNHKYVNVKMFILYTYK*
RE52922.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:55:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15345-PA | 127 | CG15345-PA | 1..127 | 1..127 | 663 | 100 | Plus |
RE52922.pep Sequence
Translation from 363 to 746
> RE52922.pep
MSSNSKSRWRSLKLVYQFESSNDFGTERDAEVDTGEGENSNHETEVHQPE
QESTEDERFQCHVKNESINEDLSEEEDYSELSTLRLEDIEENVLEGTPRI
VEMQDDSKVQPNHKYVNVKMFILYTYK*
RE52922.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 08:20:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG17969-PA | 433 | GG17969-PA | 127..236 | 18..115 | 262 | 50 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 08:20:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE17460-PA | 428 | GE17460-PA | 126..234 | 17..115 | 201 | 47.7 | Plus |