Clone RE53044 Report

Search the DGRC for RE53044

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:530
Well:44
Vector:pFlc-1
Associated Gene/TranscriptCpr50Ca-RA
Protein status:RE53044.pep: gold
Preliminary Size:2121
Sequenced Size:3448

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13338 2001-12-14 Blastp of sequenced clone
CG13338 2002-01-01 Sim4 clustering to Release 2
CG13338 2003-01-01 Sim4 clustering to Release 3
Cpr50Ca 2008-04-29 Release 5.5 accounting
Cpr50Ca 2008-08-15 Release 5.9 accounting
Cpr50Ca 2008-12-18 5.12 accounting

Clone Sequence Records

RE53044.complete Sequence

3448 bp (3448 high quality bases) assembled on 2001-12-14

GenBank Submission: AY071448

> RE53044.complete
ACAGTTGCAACAGCAGCGCGCAAGCGTGCGGTTTTCCTCCACAGTTTTTC
CAGCCAAAAGTCCGACAAACAAACAATAAGGTTCAACGCTGAACAAACTC
ATTTACAATTTGTATTTAAAATACCAAGGCGGCGAAAAACAGCGTGGGAG
AATAACAGAAATTTCAACAACAATTACAAATTGAGCTGCCACTTTTGTGG
AAACGCGAAAAGTGCAACGTGCAACTTGACGCCTCATTTGCCCGAACTTC
CGCCGACATCCAAGGAAAATGGAAATGGCTATCTGCGGCGGTGGCATCCC
CACCTTAATGCTACTGATAATGACTGCGATCATAAGTTTGGTCCAAGCTG
CAGATACCTGGCAGCGTTTACCATCCCTAGAAACGTTTTCCTCATATGAG
GACATGCAGCGTTACTTTGATCAACGGAATTTCCGCAGCATGCGTCAAAT
TGACAATCCCACGGGTGACACCTACTTGGCAGCCTTCAATCAGTACAATG
AGCAAGTGGAGAATCAGTCTCCAAGACGTGTGGCCCAAACCCACTCTAGG
ATCAAGCGTGAGCAACGCCAACTGCCAACGGCACCAAGAATGCTGCGTTT
CGAGCTGGCGGATGCCGTCGAGCCAAGTCCGGAACTTAAGCAAATTCTAC
GTCAATATCACGCCAGAGCCCTCAAGGAAAATCCCACTGCTGCAAGTCCA
GCCAGTACCAGTCAGGCACCGACTCCTGCAGTTAGTCCCACCAAGGCCAC
AAAAGCCAAGTCCCGGAAACCACGTCGACAGAGACGATCAGTTGTGGGTG
CCCAGCAGCCGGCGGATTTTAAAGTTCAAATGATCCCTTTCGAAGAAACA
GATGCTAGGGAGCCCGATCCCATCACAGCTCAGCTGATCAAGAAGGCACG
CTCCCTGGATCTCCAGAGTCAGGCCACTAGATCCACAGACTTTCGCCACA
CTAAGCCCCAAGTGGCCAGGAAGCAGCCTATTCAGGTGAGGATTCGCAAA
ACAAAGCGCTCCAAGCGTTCGGCTCCGCAGATGATCAAATTTGAGTTGGC
CGATGCCAAAGCCATGCCCCAAAGATCTGGCAAACAAATGGTATCTGAAG
CTGTACCCACTCTACTGACTATGGAAACCCAGAGGAATAACACCCAAGCT
CCGCAGCTGACTACAACCACTCCTCGGGTGGAGGACAATGATATCCTCAC
TGGTGAAGCTACGGCGGAAACCAAACGCATGTATGTTTACAAAGAGGCTC
CTGTCAATTCTGGACATGTGAAGACAAAGAAATCCCTGAGCACTTTGCCC
CATGAAGTGCAGAAAGTCATTAGCCAGCTGATGAAAGATGGATTGGGTGG
CAAGGCGTATGTCAAGTATCTTCCTGCCCAGAAATCCGACTACGAACACT
ACAAAGCCAAATCCTTGTCATATGGTGGCAAGCCTTTAGTCAACTATGTA
AAGTACATCAATAAGCCGGCTGAACCAGCGGCATCTCCATCTCCTGTCCA
AGTGCACATCCAACCGGTTCCAGTGGTGGAGCAACTACGTTATGTTTACA
AACCCCACTATGCAGCAGTTGCTCCCACAATAGCCCAACCCATTGTGGTT
CAGGAGGCGCCAGCTCCCACAGCTGCAGTGGAGGAAGTGCATCACACCTA
CACCGCAGAACTGGCACCGCCGCCCACGCAGAGTGTTGAAGTGGTTGTAC
CTCAATTTAGACCTTCCAAGCCTGATCCTCTGCTGGCGGAAGCTCCTGCC
ATCTATGGGAAGCCGCAGGAGGCCTACAACTCCTATGAGCTCCAGCCAGA
GGCTTCTCCCCTAATCAAAATCGAGTACCACGCCCAACCGGATGGCATTA
ATGAGCACTACAAACAGCTGCCCGAGTTCCAGCAACTGTCCACGCTTATT
GGCAAGTCTCCCGACGATCAGATCCATGGCCTAACCTACCTCCTGGCCAA
GGAGATGCAGGCCAAGCTGCAAAGGCAGGGCAAACAGCTGGTGGATCGCC
CGCAGGATAGTACAGCTCCGATTCTCTTTCATCCCGGACAAGGCGCCTCC
CCGGCACCCACTCTGAAAACCCTCTTGGAGCACGGATCGCTGGGGGTTCA
GCCGGGTCGATTGATTGGAATGGCTAAGACCAAGCAGTATGTGCCCATTA
TCGAACCGGGCAACAACGATGTCAAGGAGCTGCCCGCAGTGCCCAGCAGC
GCGGCCTCCAAGCTGCCCACTCCGAGTTCCTACATCGATTACACCCACGG
ACATGGCCTATCCAACGGGTATGAAGGTGTGACCAATGCGGAGGAACCGG
TTACCACAGTAGAGCATGTGGTGCACCATCCCACGGTGGCCACGCAGCTG
CATCATCAGGTCCTACTTCCAAAGCAGCAGCACCACCACCATCAGCAGCA
ACACCACGGACTTGTGGCCACTGTCCTTCCCGCGGAACTGGACTCGGACA
AGGGCGTGAATGGTCTGCACTTCGTAAACAGCGATGAGGACAAGTCGCTG
CAGCAGTACGCCTCAAAGTATGAGTTCGGTTATCGCATACGTGATTTCCA
TACCGGCAACGATTTTGGCCACAAGCAGAATCGTGATCTCCATGGCGTGA
CACGCGGCCAGTACCACATCCTTTTGCCGGACGGAAGGATCCAGAATGTC
ATCTACCACGCCGACGACACGGGTTTCCATGCGGATGTTAGCTTCGAAGG
CGCCACGAAGCATTGAAACTGGTCTACAAACGGGCCCAATGTGCAATCTA
AGCTAGGTTATCCATAAGATTCACTTACAGAAAAACAAAAAGTACACATG
TGCAACAGGACACTATGAGTTGTCTGTTAATTGAAGGCTATTTATTTGCA
AAAAGGAGCCTTACTCATTAACTCATCGAAATGCTCTTAACTTGGCTAAA
GATTCTGGCAGGTTATGCGAAAAAGTTAGGTAGCCATTGCTCAAAACCAT
TCATTTCAATTACATTTAGCATAAGTTTAAAATATTTTTAAGTGAATTAC
ATCATTACCAAATAAGCAACTATGATTTCTTAAATATTTAAAAACTAAAA
ATTTTCCAAAATTATGTCATTTTATAGTAAGAATCCAAAACGTTTAACTC
TTTCTAAGGTAACTTGGTATGGACTTAAAGATTCGTGGAATTCCAAGCAT
TCTTCAAATGCAATCATTAGATAGACATTTAATGAAAAAACATACGCCCC
AGAAATGGCCACTCATTGTTTTATTGTTCAACTAAATACCAAATAGTGAC
ATTCTGCAGTTTCCATTCTTGCTCAAATGCTATCATAGATACTGTGTGAT
TTTCATCTCATTTCAAATTAGTATAAGCCCATGAAAAATGTATTTGAAAT
TAGGGAGCCAGTGCAATAGTGCATGCAAACAATGCCGGCCAATGTGTTTA
ATCGATGTGCAATAAAGTGAAATCAATAAAATAAAAAAAAAAAAAAAA

RE53044.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:47:02
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr50Ca-RA 3502 Cpr50Ca-RA 11..3440 1..3430 17120 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 14:24:22
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 9661662..9663760 399..2497 10465 99.9 Plus
chr2R 21145070 chr2R 9674191..9675125 2497..3430 4490 98.9 Plus
chr2R 21145070 chr2R 9658084..9658334 60..310 1240 99.6 Plus
chr2R 21145070 chr2R 9661511..9661602 310..401 460 100 Plus
chr2R 21145070 chr2R 9657233..9657293 1..61 305 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:02:01 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 14:24:19
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13774338..13776436 399..2497 10495 100 Plus
2R 25286936 2R 13786872..13787805 2497..3430 4655 99.9 Plus
2R 25286936 2R 13770766..13771016 60..310 1240 99.6 Plus
2R 25286936 2R 13774187..13774278 310..401 460 100 Plus
2R 25286936 2R 13769915..13769975 1..61 305 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:13:26
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 13775537..13777635 399..2497 10495 100 Plus
2R 25260384 2R 13788071..13789004 2497..3430 4655 99.8 Plus
2R 25260384 2R 13771965..13772215 60..310 1240 99.6 Plus
2R 25260384 2R 13775386..13775477 310..401 460 100 Plus
2R 25260384 2R 13771114..13771174 1..61 305 100 Plus
Blast to na_te.dros performed 2019-03-16 14:24:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6802..6864 2344..2406 162 73 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1506..1573 2339..2406 151 69.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2591..2675 2333..2420 144 67.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2756..2821 2341..2406 132 66.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6734..6792 2345..2406 132 71 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6755..6813 2345..2406 132 71 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2406..2467 2345..2406 130 67.7 Plus
roo 9092 roo DM_ROO 9092bp 1062..1159 2313..2413 128 62.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2363..2425 2344..2406 126 66.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2411..2473 2344..2406 126 66.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6763..6825 2344..2406 126 66.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6784..6846 2344..2406 126 66.7 Plus
roo 9092 roo DM_ROO 9092bp 1066..1128 2344..2406 126 66.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6681..6768 2313..2406 124 61.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2304..2338 2372..2406 121 82.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2451..2512 2345..2406 121 66.1 Plus
roo 9092 roo DM_ROO 9092bp 1079..1140 2345..2406 121 66.1 Plus

RE53044.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 14:25:31 Download gff for RE53044.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 9657233..9657291 1..59 100 -> Plus
chr2R 9658084..9658334 60..310 99 -> Plus
chr2R 9661512..9661601 311..400 100 -> Plus
chr2R 9661664..9663760 401..2497 99 -> Plus
chr2R 9674192..9675126 2498..3432 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:32:15 Download gff for RE53044.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr50Ca-RA 1..2448 269..2716 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:14:45 Download gff for RE53044.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr50Ca-RA 1..2448 269..2716 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 15:13:40 Download gff for RE53044.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr50Ca-RA 1..2448 269..2716 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:40:00 Download gff for RE53044.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr50Ca-RA 1..2448 269..2716 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:27:33 Download gff for RE53044.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr50Ca-RA 1..2448 269..2716 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:32:14 Download gff for RE53044.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr50Ca-RA 1..3430 1..3430 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:14:45 Download gff for RE53044.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr50Ca-RA 1..3430 1..3430 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:13:40 Download gff for RE53044.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr50Ca-RA 1..3427 1..3427 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:40:00 Download gff for RE53044.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr50Ca-RA 1..3430 1..3430 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:27:33 Download gff for RE53044.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr50Ca-RA 1..3427 1..3427 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:25:31 Download gff for RE53044.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13769915..13769973 1..59 100 -> Plus
2R 13770766..13771016 60..310 99 -> Plus
2R 13774188..13774277 311..400 100 -> Plus
2R 13774340..13776436 401..2497 100 -> Plus
2R 13786873..13787806 2498..3432 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:25:31 Download gff for RE53044.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13769915..13769973 1..59 100 -> Plus
2R 13770766..13771016 60..310 99 -> Plus
2R 13774188..13774277 311..400 100 -> Plus
2R 13774340..13776436 401..2497 100 -> Plus
2R 13786873..13787806 2498..3432 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:25:31 Download gff for RE53044.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13769915..13769973 1..59 100 -> Plus
2R 13770766..13771016 60..310 99 -> Plus
2R 13774188..13774277 311..400 100 -> Plus
2R 13774340..13776436 401..2497 100 -> Plus
2R 13786873..13787806 2498..3432 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:13:40 Download gff for RE53044.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9657420..9657478 1..59 100 -> Plus
arm_2R 9658271..9658521 60..310 99 -> Plus
arm_2R 9661693..9661782 311..400 100 -> Plus
arm_2R 9661845..9663941 401..2497 100 -> Plus
arm_2R 9674378..9675311 2498..3432 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:16:44 Download gff for RE53044.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13771965..13772215 60..310 99 -> Plus
2R 13775387..13775476 311..400 100 -> Plus
2R 13775539..13777635 401..2497 100 -> Plus
2R 13788072..13789005 2498..3432 99   Plus
2R 13771114..13771172 1..59 100 -> Plus

RE53044.pep Sequence

Translation from 268 to 2715

> RE53044.pep
MEMAICGGGIPTLMLLIMTAIISLVQAADTWQRLPSLETFSSYEDMQRYF
DQRNFRSMRQIDNPTGDTYLAAFNQYNEQVENQSPRRVAQTHSRIKREQR
QLPTAPRMLRFELADAVEPSPELKQILRQYHARALKENPTAASPASTSQA
PTPAVSPTKATKAKSRKPRRQRRSVVGAQQPADFKVQMIPFEETDAREPD
PITAQLIKKARSLDLQSQATRSTDFRHTKPQVARKQPIQVRIRKTKRSKR
SAPQMIKFELADAKAMPQRSGKQMVSEAVPTLLTMETQRNNTQAPQLTTT
TPRVEDNDILTGEATAETKRMYVYKEAPVNSGHVKTKKSLSTLPHEVQKV
ISQLMKDGLGGKAYVKYLPAQKSDYEHYKAKSLSYGGKPLVNYVKYINKP
AEPAASPSPVQVHIQPVPVVEQLRYVYKPHYAAVAPTIAQPIVVQEAPAP
TAAVEEVHHTYTAELAPPPTQSVEVVVPQFRPSKPDPLLAEAPAIYGKPQ
EAYNSYELQPEASPLIKIEYHAQPDGINEHYKQLPEFQQLSTLIGKSPDD
QIHGLTYLLAKEMQAKLQRQGKQLVDRPQDSTAPILFHPGQGASPAPTLK
TLLEHGSLGVQPGRLIGMAKTKQYVPIIEPGNNDVKELPAVPSSAASKLP
TPSSYIDYTHGHGLSNGYEGVTNAEEPVTTVEHVVHHPTVATQLHHQVLL
PKQQHHHHQQQHHGLVATVLPAELDSDKGVNGLHFVNSDEDKSLQQYASK
YEFGYRIRDFHTGNDFGHKQNRDLHGVTRGQYHILLPDGRIQNVIYHADD
TGFHADVSFEGATKH*

RE53044.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 21:25:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13709-PA 856 GF13709-PA 68..856 15..815 3055 77.1 Plus
Dana\GF12672-PA 213 GF12672-PA 119..184 745..810 164 46.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 21:25:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20400-PA 810 GG20400-PA 1..810 1..815 3836 91.2 Plus
Dere\GG20868-PA 217 GG20868-PA 121..186 745..810 163 46.3 Plus
Dere\GG20401-PA 181 GG20401-PA 90..150 751..811 149 51.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 21:25:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21032-PA 798 GH21032-PA 7..798 12..815 2276 62.2 Plus
Dgri\GH21033-PA 173 GH21033-PA 87..147 751..811 148 51.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:07:58
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr50Ca-PA 815 CG13338-PA 1..815 1..815 4241 100 Plus
Cpr56F-PA 217 CG9036-PA 111..186 731..810 165 42.5 Plus
Cpr50Cb-PA 178 CG6305-PA 90..150 751..811 152 51.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 21:25:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18633-PA 785 GI18633-PA 15..785 29..815 2222 60.5 Plus
Dmoj\GI18779-PA 206 GI18779-PA 110..175 745..810 166 46.3 Plus
Dmoj\GI18634-PA 173 GI18634-PA 87..151 751..815 150 50 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 21:25:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17472-PA 847 GL17472-PA 1..847 3..815 2648 69.6 Plus
Dper\GL16837-PA 227 GL16837-PA 127..192 745..810 163 46.3 Plus
Dper\GL17473-PA 176 GL17473-PA 89..149 751..811 152 53.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 21:25:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12217-PA 841 GA12217-PA 1..841 3..815 2615 69 Plus
Dpse\GA21496-PB 227 GA21496-PB 125..190 745..810 163 46.3 Plus
Dpse\GA19503-PA 176 GA19503-PA 89..149 751..811 152 53.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 21:25:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21488-PA 813 GM21488-PA 1..813 1..815 3847 91.9 Plus
Dsec\GM21489-PA 178 GM21489-PA 90..150 751..811 149 51.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 21:25:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10982-PA 826 GD10982-PA 37..826 26..815 3936 96.8 Plus
Dsim\GD25285-PA 215 GD25285-PA 119..184 745..810 163 46.3 Plus
Dsim\GD10983-PA 178 GD10983-PA 90..150 751..811 149 51.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 21:25:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21645-PA 793 GJ21645-PA 7..793 3..815 2471 63.5 Plus
Dvir\GJ21806-PA 229 GJ21806-PA 132..197 745..810 161 46.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 21:25:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17854-PA 842 GK17854-PA 76..840 16..812 2341 63.7 Plus
Dwil\GK19531-PA 134 GK19531-PA 36..101 745..810 155 46.3 Plus
Dwil\GK17855-PA 176 GK17855-PA 90..154 751..815 150 48.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 21:25:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12560-PA 814 GE12560-PA 1..814 1..815 3927 93.4 Plus
Dyak\GE13808-PA 215 GE13808-PA 119..184 745..810 164 46.3 Plus
Dyak\GE12561-PA 180 GE12561-PA 90..150 751..811 149 51.6 Plus

RE53044.hyp Sequence

Translation from 268 to 2715

> RE53044.hyp
MEMAICGGGIPTLMLLIMTAIISLVQAADTWQRLPSLETFSSYEDMQRYF
DQRNFRSMRQIDNPTGDTYLAAFNQYNEQVENQSPRRVAQTHSRIKREQR
QLPTAPRMLRFELADAVEPSPELKQILRQYHARALKENPTAASPASTSQA
PTPAVSPTKATKAKSRKPRRQRRSVVGAQQPADFKVQMIPFEETDAREPD
PITAQLIKKARSLDLQSQATRSTDFRHTKPQVARKQPIQVRIRKTKRSKR
SAPQMIKFELADAKAMPQRSGKQMVSEAVPTLLTMETQRNNTQAPQLTTT
TPRVEDNDILTGEATAETKRMYVYKEAPVNSGHVKTKKSLSTLPHEVQKV
ISQLMKDGLGGKAYVKYLPAQKSDYEHYKAKSLSYGGKPLVNYVKYINKP
AEPAASPSPVQVHIQPVPVVEQLRYVYKPHYAAVAPTIAQPIVVQEAPAP
TAAVEEVHHTYTAELAPPPTQSVEVVVPQFRPSKPDPLLAEAPAIYGKPQ
EAYNSYELQPEASPLIKIEYHAQPDGINEHYKQLPEFQQLSTLIGKSPDD
QIHGLTYLLAKEMQAKLQRQGKQLVDRPQDSTAPILFHPGQGASPAPTLK
TLLEHGSLGVQPGRLIGMAKTKQYVPIIEPGNNDVKELPAVPSSAASKLP
TPSSYIDYTHGHGLSNGYEGVTNAEEPVTTVEHVVHHPTVATQLHHQVLL
PKQQHHHHQQQHHGLVATVLPAELDSDKGVNGLHFVNSDEDKSLQQYASK
YEFGYRIRDFHTGNDFGHKQNRDLHGVTRGQYHILLPDGRIQNVIYHADD
TGFHADVSFEGATKH*

RE53044.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:10:16
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr50Ca-PA 815 CG13338-PA 1..815 1..815 4241 100 Plus
Cpr56F-PA 217 CG9036-PA 111..186 731..810 165 42.5 Plus
Cpr50Cb-PA 178 CG6305-PA 90..150 751..811 152 51.6 Plus