Clone RE53556 Report

Search the DGRC for RE53556

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:535
Well:56
Vector:pFlc-1
Associated Gene/Transcriptm-RA
Protein status:RE53556.pep: gold
Sequenced Size:3426

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9369 2002-01-01 Sim4 clustering to Release 2
CG9369 2003-01-01 Sim4 clustering to Release 3
CG9369 2003-08-11 Blastp of sequenced clone
m 2008-04-29 Release 5.5 accounting
m 2008-08-15 Release 5.9 accounting
m 2008-12-18 5.12 accounting

Clone Sequence Records

RE53556.complete Sequence

3426 bp (3426 high quality bases) assembled on 2003-08-11

GenBank Submission: BT010236

> RE53556.complete
ATTTCGCGTTCGTCGCTCGCCGAGTCCACACGTGCTGCTGCTGCTAACGG
TCGTGATCGGTGATCGTGATCCGTGATCCGATGCCCAGTGTGCTGCCCAG
TCGCGCCTACAACAAATGTTGATAAAATAAATAAATTTCAAATAAAATAG
AAAATCAAATAAGTAACACCACCCGAAGTGCTTACAAGTGTTAGTGCAAT
TTTTTTTTATTGTTCTTGTTGTTGCCACTGCCTGTTACCGTTACTTGCTT
AAGCTTAGCAAGATACCGAGAAAGAACGAGAAGAGAGTTGAGAAGAAACG
TTCCCGCGAAAGCCGGGATTTCACAAAAGAACGGAAATATAAGGAGTCCA
GAGCAGCTGTAACACACTCAGCTGTGTCTTGACCTTCGGAAAGATTACAA
CTTATCGATCCGATCGCCACGCCCACAGCGCCAACATGTGGAGCCCACAA
AAAGGCCCTACACGACTGTGGGACCTTAGGTTTAGTAGCTGTATATTTAT
CTTACACTTAATGTTTAGTTTAGTCATAGCTGGTAATGAACTGTGGCCCA
TGGAACGGCCAGACGGAATGCCCAATATCGTCTCACTGGAGGTGATGTGC
GGCAAGGATCACATGGATGTACATCTCACCTTTTCGCATCCATTCGAGGG
CATCGTCAGCTCCAAAGGACAACACAGCGATCCGCGTTGCGTTTATGTGC
CGCCCTCAACGGGCAAGACGTTCTTCTCCTTCCGCATCTCGTACTCCCGC
TGCGGCACCAAGCCGGATCTCAACGGACAGTTCTATGAGAATACGGTGGT
GGTTCAGTACGACAAGGATCTGCTGGAAGTCTGGGATGAGGCTAAGCGAT
TGCGATGCGAGTGGTTCAATGACTACGAGAAGACCGCCTCCAAGCCACCG
ATGGTCATTGCCGATCTCGATGTTATCCAACTGGATTTCCGTGGTGACAA
TGTGGACTGCTGGATGGAGATTCAGCATGGCAAGGGACCCTGGGCGCCGC
CTGTTAGTGGAATTGTACCACTCGGCTCAACTTTAACCCTGGTGGTGGCC
ATCAATGATTATCGAGGCGAATTCGATATGCGTGTGAAATCCTGCGTGGC
CTCCGATGGATCTGGTCATGTGATCAACCTGTCCGATGAATTTGGCTGCG
TGCTGCGACCCAAGATGATCTCACGCTTCCTGAAGGCTCGTGCGCCCGAC
GAGAGGGCCACCGTGATCACCTATGCCTTCTTCCATGCCTTCAAGTTCCC
GGATGCCCTCAGTGTGCACATCAAGTGCAAGGTGGAGATTTGTCGCCACG
GCTGTCTCGATCATTGCCAGAACACGGGCGTGGGCGGTGGTGGCGGCGGA
TCCGGCGAGAGCCTGGGATTGGGTCTCGGCCTGGGACTGACCAATGCCAA
TGAGCGTAAGGATGTGCACATGTCGGATGCCTTGGGCAGTAGCAGCAACG
ATCTGCTCAGGGATTTGGCACTGCCGCCGGGCGGTCAACACGGCATGGGC
ATGGGAATGGGTCCAGATCATGACATCTTCTACGAGGACATCATCCACGA
TCACAAACAAACGCTGGGCGGCGGAGGAATGCCAGCTGGCGGAGATTATG
GTCACGAGAAGAGTGTTAATCTGCAGCCACGACCCGTGCACGAGGAACAG
GAGGAGGCGGATCTTTCAGATCTATTTGGCGATGAGGATCTTGCCGACTT
GGACATGGAAGGCGGCGAGGGCGAGCGGTACTTGGGTCTGAAGAAGAGCG
GCAAGTTCCCACACGGTCCACGGCAGCTGGAGGCCCAGAAACGTATGGGT
GTACCGATGGCGGGACCCCGCTCCCTGGAGCCACATGGTCATGGCGATGA
GGATGTGCCACGACCCGTCTACAGACCACAGGCGGAGGCGTTGAAGCAGC
CACGCGAGGATCACATCGATTTGGACAAGGAGGAGGAAGAGGAGAAGGAG
AAGGAAGAGAAAACGCAGCAGGAGGATAAGCTGACAGGTGAAGGAGGTGC
AGCAGCCAGCAATGATTCCTCCAAGAGCCGTCGCCGTCGTTCGTTGGTCA
TTTCCGATCGCAAGGTGCGCAGTGCCGATGTGGGCGTCAGCGGTCTGTAC
GATGTTATATCCGAGGCGGATTTGGCCTTCTCGCCGGACTCCAAACAGGA
GGCGGTCACCGTGTTCCAGGGCAAGATTAGCGAGGAGGTTGTCTACGGCA
TTTGTATGCCAGTGCCCGGCTTCAGCATTCTCTTCATCGTTGTCATTTCG
ACAACGATCGTGTCCGCTCTGGTGGCCGGATCCCTGCTATATCGCTATCA
GCTGCAAAAGGAGGCGCTGGAGAAGCAGACACCCATGCCGGTGACCGGAA
CACTGGCCTCCTGGATGACCCTGCGACTGTTTCGCCTGCGACACATGCAA
CAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAACAACAAGTGAG
GCAGCCGAGTTCAGGTCACGAAACGGTCCAGTGATCGTTCGGGATCAAGA
TATAGATAGCAAGCAGAATCATAATCAGAATCAGAATCGGAATAGCAATC
GAAAGCGAATTCAAAATCGAAATGGAAACCAGCAGAAAGCAAAATAAAAA
CACGTTGCCCACATCTACGCCTTCCATTATTATTTATTTATTATGATTAT
TGTTTTTTTTTTTTTTGAAGAAACGTATTATTGGGTTGTTTGTTCGGAAT
CCTGATCCAAACGAAAAAAAGAGATATATATGGTGCAGATATCAGATATC
AGAGATCGGGCAACAATGCAATACTCAAACTGCTCGATTCGGTGCTGAAT
GTTCTAAAAGTTTTTTTTTTTTTGCAATTTGTTTTTTTGGATGCATTTAG
TCGTTAAATTGCATAGAGGAAATCATAGAAAATTAATGGAAATAATACAC
AAAGAGAGAGAGAGATGCACAAACAAAATGAAATGAAATGAAGACTCCGG
AAAGGTGCTCCAGGCTTAAGGAGACGGATGTTATGCAACGCATCCACTAG
GCATAAGGGAACTTATTTATTTATATATAAATATATATATATCTATAAAG
TATACATACGAGATTTAGCTTGTAAGTTTGTGTGGTATGGAAATTTTTAA
TTTTATTTTGCTTTCGGACATTTGTTTTGTTTTTTTTTGTGTGCTCTTTT
CGACCGGCATCCAAAACATAATTAGGGGAATTTTAGTTAAATTTTAGTAC
ATTCTCACTCTCACACACACACACACACACTCATAAAACTCACAGACTTA
CTGACGCACACATACAAAACCGACTACCATTTTCCATTGATAGTATGAAC
AAAAGCAAATGCAACTCCTTGCATGCATATTAAAATTTAAATTTAAGTGC
AAATTTTATAACTGAAAAATTGACAATTGAATAAAGATTAGTTAAGATGA
AAAATAAAAAAAAAAAAAAAAAAAAA

RE53556.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:31:38
Subject Length Description Subject Range Query Range Score Percent Strand
m-RA 3438 m-RA 1..3408 1..3408 16950 99.9 Plus
m.a 3438 m.a 1..3408 1..3408 16950 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:41:07
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 11658361..11660695 1065..3405 11315 99.3 Plus
chrX 22417052 chrX 11632227..11632536 1..310 1550 100 Plus
chrX 22417052 chrX 11645495..11645804 1..310 1550 100 Plus
chrX 22417052 chrX 11657519..11657674 513..668 780 100 Plus
chrX 22417052 chrX 11657943..11658093 795..945 755 100 Plus
chrX 22417052 chrX 11657742..11657877 664..799 665 99.3 Plus
chrX 22417052 chrX 11658171..11658295 943..1067 625 100 Plus
chrX 22417052 chrX 11654371..11654477 407..513 535 100 Plus
chrX 22417052 chrX 11633603..11633699 311..407 485 100 Plus
chrX 22417052 chrX 11646871..11646967 311..407 485 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:02:25 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:41:05
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11767168..11769511 1065..3408 11610 99.9 Plus
X 23542271 X 11741005..11741314 1..310 1550 100 Plus
X 23542271 X 11754273..11754582 1..310 1550 100 Plus
X 23542271 X 11766326..11766481 513..668 780 100 Plus
X 23542271 X 11766750..11766900 795..945 755 100 Plus
X 23542271 X 11766549..11766684 664..799 680 100 Plus
X 23542271 X 11766978..11767102 943..1067 625 100 Plus
X 23542271 X 11763175..11763281 407..513 535 100 Plus
X 23542271 X 11742381..11742477 311..407 485 100 Plus
X 23542271 X 11755649..11755745 311..407 485 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:59:51
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 11775266..11777609 1065..3408 11630 99.8 Plus
X 23527363 X 11762371..11762680 1..310 1550 100 Plus
X 23527363 X 11749103..11749412 1..310 1550 100 Plus
X 23527363 X 11774424..11774579 513..668 780 100 Plus
X 23527363 X 11774848..11774998 795..945 755 100 Plus
X 23527363 X 11774647..11774782 664..799 680 100 Plus
X 23527363 X 11775076..11775200 943..1067 625 100 Plus
X 23527363 X 11771273..11771379 407..513 535 100 Plus
X 23527363 X 11763747..11763843 311..407 485 100 Plus
X 23527363 X 11750479..11750575 311..407 485 100 Plus
Blast to na_te.dros performed 2019-03-16 07:41:05
Subject Length Description Subject Range Query Range Score Percent Strand
1360 3409 1360 1360 3409bp 3042..3109 3327..3395 117 65.2 Plus

RE53556.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:42:09 Download gff for RE53556.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 11646871..11646967 311..407 100 -> Plus
chrX 11654372..11654477 408..513 100 -> Plus
chrX 11657520..11657673 514..667 100 -> Plus
chrX 11657746..11657873 668..795 99 -> Plus
chrX 11657944..11658091 796..943 100 -> Plus
chrX 11658172..11658294 944..1066 100 -> Plus
chrX 11658363..11660495 1067..3205 91 == Plus
chrX 11660557..11660695 3267..3405 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:36:44 Download gff for RE53556.complete
Subject Subject Range Query Range Percent Splice Strand
m-RA 1..2049 436..2484 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:51:54 Download gff for RE53556.complete
Subject Subject Range Query Range Percent Splice Strand
m-RA 1..2049 436..2484 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:34:02 Download gff for RE53556.complete
Subject Subject Range Query Range Percent Splice Strand
m-RA 1..2049 436..2484 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:17:55 Download gff for RE53556.complete
Subject Subject Range Query Range Percent Splice Strand
m-RA 1..2049 436..2484 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:39:30 Download gff for RE53556.complete
Subject Subject Range Query Range Percent Splice Strand
m-RA 1..2049 436..2484 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:36:42 Download gff for RE53556.complete
Subject Subject Range Query Range Percent Splice Strand
m-RA 1..3405 1..3405 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:51:53 Download gff for RE53556.complete
Subject Subject Range Query Range Percent Splice Strand
m-RA 1..3405 1..3405 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:34:02 Download gff for RE53556.complete
Subject Subject Range Query Range Percent Splice Strand
m-RA 1..3405 1..3405 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:17:55 Download gff for RE53556.complete
Subject Subject Range Query Range Percent Splice Strand
m-RA 1..3405 1..3405 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:39:30 Download gff for RE53556.complete
Subject Subject Range Query Range Percent Splice Strand
m-RA 1..3405 1..3405 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:42:09 Download gff for RE53556.complete
Subject Subject Range Query Range Percent Splice Strand
X 11766751..11766898 796..943 100 -> Plus
X 11766979..11767101 944..1066 100 -> Plus
X 11754273..11754582 1..310 100 -> Plus
X 11755649..11755745 311..407 100 -> Plus
X 11763176..11763281 408..513 100 -> Plus
X 11766327..11766480 514..667 100 -> Plus
X 11766553..11766680 668..795 100 -> Plus
X 11767170..11769508 1067..3405 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:42:09 Download gff for RE53556.complete
Subject Subject Range Query Range Percent Splice Strand
X 11766751..11766898 796..943 100 -> Plus
X 11766979..11767101 944..1066 100 -> Plus
X 11754273..11754582 1..310 100 -> Plus
X 11755649..11755745 311..407 100 -> Plus
X 11763176..11763281 408..513 100 -> Plus
X 11766327..11766480 514..667 100 -> Plus
X 11766553..11766680 668..795 100 -> Plus
X 11767170..11769508 1067..3405 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:42:09 Download gff for RE53556.complete
Subject Subject Range Query Range Percent Splice Strand
X 11766751..11766898 796..943 100 -> Plus
X 11766979..11767101 944..1066 100 -> Plus
X 11754273..11754582 1..310 100 -> Plus
X 11755649..11755745 311..407 100 -> Plus
X 11763176..11763281 408..513 100 -> Plus
X 11766327..11766480 514..667 100 -> Plus
X 11766553..11766680 668..795 100 -> Plus
X 11767170..11769508 1067..3405 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:34:02 Download gff for RE53556.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11660784..11660931 796..943 100 -> Plus
arm_X 11661012..11661134 944..1066 100 -> Plus
arm_X 11660586..11660713 668..795 100 -> Plus
arm_X 11648306..11648615 1..310 100 -> Plus
arm_X 11649682..11649778 311..407 100 -> Plus
arm_X 11657209..11657314 408..513 100 -> Plus
arm_X 11660360..11660513 514..667 100 -> Plus
arm_X 11661203..11663541 1067..3405 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:52:02 Download gff for RE53556.complete
Subject Subject Range Query Range Percent Splice Strand
X 11774651..11774778 668..795 100 -> Plus
X 11774849..11774996 796..943 100 -> Plus
X 11775077..11775199 944..1066 100 -> Plus
X 11775268..11777606 1067..3405 99   Plus
X 11762371..11762680 1..310 100 -> Plus
X 11763747..11763843 311..407 100 -> Plus
X 11771274..11771379 408..513 100 -> Plus
X 11774425..11774578 514..667 100 -> Plus

RE53556.pep Sequence

Translation from 435 to 2483

> RE53556.pep
MWSPQKGPTRLWDLRFSSCIFILHLMFSLVIAGNELWPMERPDGMPNIVS
LEVMCGKDHMDVHLTFSHPFEGIVSSKGQHSDPRCVYVPPSTGKTFFSFR
ISYSRCGTKPDLNGQFYENTVVVQYDKDLLEVWDEAKRLRCEWFNDYEKT
ASKPPMVIADLDVIQLDFRGDNVDCWMEIQHGKGPWAPPVSGIVPLGSTL
TLVVAINDYRGEFDMRVKSCVASDGSGHVINLSDEFGCVLRPKMISRFLK
ARAPDERATVITYAFFHAFKFPDALSVHIKCKVEICRHGCLDHCQNTGVG
GGGGGSGESLGLGLGLGLTNANERKDVHMSDALGSSSNDLLRDLALPPGG
QHGMGMGMGPDHDIFYEDIIHDHKQTLGGGGMPAGGDYGHEKSVNLQPRP
VHEEQEEADLSDLFGDEDLADLDMEGGEGERYLGLKKSGKFPHGPRQLEA
QKRMGVPMAGPRSLEPHGHGDEDVPRPVYRPQAEALKQPREDHIDLDKEE
EEEKEKEEKTQQEDKLTGEGGAAASNDSSKSRRRRSLVISDRKVRSADVG
VSGLYDVISEADLAFSPDSKQEAVTVFQGKISEEVVYGICMPVPGFSILF
IVVISTTIVSALVAGSLLYRYQLQKEALEKQTPMPVTGTLASWMTLRLFR
LRHMQQQQQQQQQQQQQQQQVRQPSSGHETVQ*

RE53556.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 02:07:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20431-PA 679 GF20431-PA 1..679 1..682 3132 91.4 Plus
Dana\GF20249-PA 709 GF20249-PA 240..514 34..294 684 46 Plus
Dana\GF24738-PA 612 GF24738-PA 71..379 35..329 683 41.7 Plus
Dana\GF25319-PB 940 GF25319-PB 56..306 47..290 364 32.5 Plus
Dana\GF25319-PA 2391 GF10338-PA 56..306 47..290 360 32.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 02:07:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18442-PA 681 GG18442-PA 1..681 1..682 3531 97.1 Plus
Dere\GG18833-PA 693 GG18833-PA 227..503 32..294 686 45.7 Plus
Dere\GG14194-PA 611 GG14194-PA 71..379 35..329 680 41.4 Plus
Dere\GG15228-PA 613 GG15228-PA 229..476 51..290 342 32.1 Plus
Dere\GG16112-PA 1581 GG16112-PA 55..304 48..290 340 31.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 02:07:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24389-PA 711 GH24389-PA 1..665 1..654 2717 81.7 Plus
Dgri\GH24587-PA 707 GH24587-PA 239..517 32..294 685 45.4 Plus
Dgri\GH15425-PA 611 GH15425-PA 73..381 35..329 668 40.8 Plus
Dgri\GH14786-PA 2192 GH14786-PA 55..305 47..290 350 31.3 Plus
Dgri\GH15681-PA 600 GH15681-PA 220..467 51..290 339 32.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:35:31
Subject Length Description Subject Range Query Range Score Percent Strand
m-PA 682 CG9369-PA 1..682 1..682 3628 100 Plus
dy-PA 699 CG9355-PA 233..509 32..294 674 45.7 Plus
dyl-PC 611 CG15013-PC 71..376 35..326 672 41.8 Plus
dyl-PA 611 CG15013-PA 71..376 35..326 672 41.8 Plus
dyl-PB 611 CG15013-PB 71..376 35..326 672 41.8 Plus
zye-PA 2284 CG5847-PA 54..304 47..290 368 32.1 Plus
CG15020-PA 604 CG15020-PA 220..467 51..290 332 32.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 02:07:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15329-PA 664 GI15329-PA 1..664 1..682 2855 83.2 Plus
Dmoj\GI15258-PA 719 GI15258-PA 254..531 32..294 692 45.9 Plus
Dmoj\GI13026-PA 613 GI13026-PA 75..384 34..329 665 40.6 Plus
Dmoj\GI11840-PA 2351 GI11840-PA 55..305 47..290 354 31.3 Plus
Dmoj\GI12727-PA 600 GI12727-PA 217..464 51..290 341 32.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 02:07:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15150-PA 559 GL15150-PA 1..497 1..480 2135 88.6 Plus
Dper\GL15227-PA 491 GL15227-PA 21..303 32..296 686 45.1 Plus
Dper\GL16287-PA 611 GL16287-PA 72..380 35..329 682 41.7 Plus
Dper\GL11883-PA 304 GL11883-PA 49..284 47..273 343 31.8 Plus
Dper\GL17896-PA 606 GL17896-PA 219..466 51..290 342 32.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 02:07:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22785-PA 698 GA22785-PA 1..698 1..682 2811 85.5 Plus
Dpse\GA21724-PA 852 GA21724-PA 382..664 32..296 685 45.1 Plus
Dpse\GA13432-PA 611 GA13432-PA 72..380 35..329 682 41.7 Plus
Dpse\GA23353-PA 2214 GA23353-PA 49..301 47..290 364 32 Plus
Dpse\GA13439-PA 606 GA13439-PA 219..466 51..290 342 32.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 02:07:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13107-PA 664 GM13107-PA 1..664 1..682 3345 93.6 Plus
Dsec\GM13046-PA 856 GM13046-PA 390..666 32..294 688 45.7 Plus
Dsec\GM13985-PA 611 GM13985-PA 71..379 35..329 680 41.4 Plus
Dsec\GM22290-PA 612 GM22290-PA 54..304 47..290 357 32.1 Plus
Dsec\GM14659-PA 604 GM14659-PA 220..467 51..290 344 32.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 02:07:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17048-PA 678 GD17048-PA 1..678 1..682 3585 98.5 Plus
Dsim\GD13266-PA 611 GD13266-PA 71..379 35..329 680 41.4 Plus
Dsim\dy-PA 699 GD15971-PA 233..509 32..294 669 44.6 Plus
Dsim\GD14884-PA 1004 GD14884-PA 55..304 48..290 348 31.9 Plus
Dsim\GD13844-PA 602 GD13844-PA 218..465 51..290 344 32.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 02:07:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14767-PA 673 GJ14767-PA 1..673 1..682 2734 81.9 Plus
Dvir\GJ14830-PA 741 GJ14830-PA 270..547 32..294 683 45.5 Plus
Dvir\GJ12122-PA 611 GJ12122-PA 73..378 35..326 664 41.2 Plus
Dvir\GJ13539-PA 933 GJ13539-PA 55..305 47..290 374 32.1 Plus
Dvir\GJ12714-PA 598 GJ12714-PA 215..462 51..290 339 32.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 02:07:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16317-PA 672 GK16317-PA 1..672 1..682 2866 84.2 Plus
Dwil\GK10912-PA 612 GK10912-PA 71..379 35..329 682 41.7 Plus
Dwil\GK16283-PA 687 GK16283-PA 204..487 32..296 680 45.6 Plus
Dwil\GK16962-PA 2396 GK16962-PA 46..304 41..290 350 31.3 Plus
Dwil\GK16582-PA 590 GK16582-PA 203..450 51..290 339 32.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 02:07:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15664-PA 685 GE15664-PA 1..685 1..682 3510 96.4 Plus
Dyak\GE17598-PA 725 GE17598-PA 257..533 32..294 684 45.3 Plus
Dyak\GE20624-PA 611 GE20624-PA 71..379 35..329 680 41.4 Plus
Dyak\GE21447-PA 605 GE21447-PA 200..468 35..290 345 31.4 Plus
Dyak\GE19679-PA 1042 GE19679-PA 55..304 48..290 341 31.5 Plus

RE53556.hyp Sequence

Translation from 435 to 2483

> RE53556.hyp
MWSPQKGPTRLWDLRFSSCIFILHLMFSLVIAGNELWPMERPDGMPNIVS
LEVMCGKDHMDVHLTFSHPFEGIVSSKGQHSDPRCVYVPPSTGKTFFSFR
ISYSRCGTKPDLNGQFYENTVVVQYDKDLLEVWDEAKRLRCEWFNDYEKT
ASKPPMVIADLDVIQLDFRGDNVDCWMEIQHGKGPWAPPVSGIVPLGSTL
TLVVAINDYRGEFDMRVKSCVASDGSGHVINLSDEFGCVLRPKMISRFLK
ARAPDERATVITYAFFHAFKFPDALSVHIKCKVEICRHGCLDHCQNTGVG
GGGGGSGESLGLGLGLGLTNANERKDVHMSDALGSSSNDLLRDLALPPGG
QHGMGMGMGPDHDIFYEDIIHDHKQTLGGGGMPAGGDYGHEKSVNLQPRP
VHEEQEEADLSDLFGDEDLADLDMEGGEGERYLGLKKSGKFPHGPRQLEA
QKRMGVPMAGPRSLEPHGHGDEDVPRPVYRPQAEALKQPREDHIDLDKEE
EEEKEKEEKTQQEDKLTGEGGAAASNDSSKSRRRRSLVISDRKVRSADVG
VSGLYDVISEADLAFSPDSKQEAVTVFQGKISEEVVYGICMPVPGFSILF
IVVISTTIVSALVAGSLLYRYQLQKEALEKQTPMPVTGTLASWMTLRLFR
LRHMQQQQQQQQQQQQQQQQVRQPSSGHETVQ*

RE53556.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:09:12
Subject Length Description Subject Range Query Range Score Percent Strand
m-PA 682 CG9369-PA 1..682 1..682 3628 100 Plus
dy-PA 699 CG9355-PA 233..509 32..294 674 45.7 Plus
dyl-PC 611 CG15013-PC 71..376 35..326 672 41.8 Plus
dyl-PA 611 CG15013-PA 71..376 35..326 672 41.8 Plus
dyl-PB 611 CG15013-PB 71..376 35..326 672 41.8 Plus