BDGP Sequence Production Resources |
Search the DGRC for RE53745
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 537 |
Well: | 45 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Mst85C-RA |
Protein status: | RE53745.pep: gold |
Preliminary Size: | 833 |
Sequenced Size: | 1365 |
Gene | Date | Evidence |
---|---|---|
CG11993 | 2001-12-14 | Blastp of sequenced clone |
CG11993 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11993 | 2003-01-01 | Sim4 clustering to Release 3 |
Mst85C | 2008-04-29 | Release 5.5 accounting |
Mst85C | 2008-08-15 | Release 5.9 accounting |
Mst85C | 2008-12-18 | 5.12 accounting |
1365 bp (1365 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071454
> RE53745.complete GCCAACGCCATCTGGCCACACTGCAGTGAAAAGGAAAACAAGAAGTCGCA AATCCAATCTCCATTGCAATTTTGAACACCATTCCTTTGCATAACTATTG CCCACGCAACTGCATCTCTGATGCCCACAGACTGGCGATGAAGCCCCAGA GCAAGCGGAAATCATTCCCATTCAATGCGCCTCCTCCGGGCGGTATCATG GACTTCGGATTCGGGAGCTGCAGCACCTTCGGCAATTCGGTGGAGAATGA TCTGGTAAAATGGCAGCATAAGCGAAAATCCGAGCAGCCGGCACCGGCAG TGCTACCACCCAAAATGCTTATAACCGAGGAGAGGATCACCCAGCATTTC AGCGGTCTATCGCTGGATCCGAAGATCAATGTCGCCGCCACGGCCGTTGT TAGCAACAACAACAGCGTGGCCAGCGTTACGGGCGGACTGGCCACGGATG ATATACCATCCACCAGCACCGGGAAGACCCACCACCCCAATCCCGCCTAT CAAATGGCGGCCATGGAACTGGAGCAGAAACTGCGCAATGCCAATCGCAT CGTAATTTGTGATGGCCTTAAGCCAGGATCGGGTCCCGGTTCCGCTCCAC CTGTAATACCACCGGAGTGGCTAATCAAGTCCATACCACGTCCCTGCACC GCCTTGGTCCCTTGGCAGCCTTCGCCACTGCAGATGCCGATGCCGATGCC GGAAGTCAAGATGGTGTCGCCCCAAATAGTGGCACCCATGGCTGCGGCAC CGGCGGTCCAGGAGCTGGATGACTACGATGACGATCTGGAGTTCTTCGAG AACAACAACACGTGCAGCGTGAATCTTAACAAGTCTGAGCAGGAGCACAT GGACGAAGACCTGTAGCGATAGCCATATAAAACCCTAAACCATAAGCATT AAAGTGTAGATTTGTATGTCCGTAACCGTAAGAACCCAGTTGATAGCATG CAAGAATACTCCGCCTCCTTATTTTTTTATTACTATTGAAAATAGATAGA TGTATGTGATTCAATCTGGAATGTTCCGGAATATTCGTTATTTGAAGCAA GTGAGTCGAGAACAGATAACTTTCGAGAGACGCAACGGCGGACGTCAAAC GAACACCTGACTTAAGAAAAGTTTTTCTAAGATGAACTAATTCATTTTAC TTTTTACATCAATTTATAAGCACTTTTTACAGTATATGAGTTTCTGCAGT AAAGTGGATCGAACGAGCTGAATCTACCATATTGTTTAAAATATACTTTA CATTGCGTTTTTGGAATCGACCTTTCTTTGCTGGCTACTAAAATTAGAAA GATACGTATTTTTTGCAATTGATAAAGAATAAAGAATAAAACTGTAAGCA AAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 4876718..4877021 | 1..304 | 100 | -> | Plus |
chr3R | 4877081..4878125 | 305..1349 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mst85C-RA | 1..729 | 138..866 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mst85C-RA | 1..729 | 138..866 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mst85C-RA | 1..729 | 138..866 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mst85C-RA | 1..729 | 138..866 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mst85C-RA | 1..729 | 138..866 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mst85C-RA | 1..1349 | 1..1349 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mst85C-RA | 1..1349 | 1..1349 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mst85C-RA | 4..1352 | 1..1349 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mst85C-RA | 1..1349 | 1..1349 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mst85C-RA | 4..1352 | 1..1349 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9050824..9051127 | 1..304 | 100 | -> | Plus |
3R | 9051187..9052231 | 305..1349 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9050824..9051127 | 1..304 | 100 | -> | Plus |
3R | 9051187..9052231 | 305..1349 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9050824..9051127 | 1..304 | 100 | -> | Plus |
3R | 9051187..9052231 | 305..1349 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 4876546..4876849 | 1..304 | 100 | -> | Plus |
arm_3R | 4876909..4877953 | 305..1349 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8791655..8791958 | 1..304 | 100 | -> | Plus |
3R | 8792018..8793062 | 305..1349 | 100 | Plus |
Translation from 137 to 865
> RE53745.pep MKPQSKRKSFPFNAPPPGGIMDFGFGSCSTFGNSVENDLVKWQHKRKSEQ PAPAVLPPKMLITEERITQHFSGLSLDPKINVAATAVVSNNNSVASVTGG LATDDIPSTSTGKTHHPNPAYQMAAMELEQKLRNANRIVICDGLKPGSGP GSAPPVIPPEWLIKSIPRPCTALVPWQPSPLQMPMPMPEVKMVSPQIVAP MAAAPAVQELDDYDDDLEFFENNNTCSVNLNKSEQEHMDEDL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16579-PA | 249 | GF16579-PA | 1..249 | 1..242 | 797 | 73.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14871-PA | 240 | GG14871-PA | 1..240 | 1..242 | 1169 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19345-PA | 283 | GH19345-PA | 43..283 | 13..242 | 606 | 61.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mst85C-PB | 242 | CG11993-PB | 1..242 | 1..242 | 1290 | 100 | Plus |
Mst85C-PA | 242 | CG11993-PA | 1..242 | 1..242 | 1290 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22555-PA | 274 | GI22555-PA | 42..274 | 13..242 | 645 | 62.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12119-PA | 118 | GL12119-PA | 1..118 | 123..242 | 294 | 73.8 | Plus |
Dper\GL12118-PA | 84 | GL12118-PA | 1..84 | 1..90 | 232 | 59.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11318-PA | 239 | GA11318-PA | 1..239 | 1..242 | 683 | 70.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23782-PA | 240 | GM23782-PA | 1..240 | 1..242 | 1228 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18593-PA | 118 | GD18593-PA | 1..118 | 123..242 | 587 | 95 | Plus |
Dsim\GD18592-PA | 68 | GD18592-PA | 1..65 | 21..85 | 333 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23744-PA | 268 | GJ23744-PA | 42..268 | 13..242 | 668 | 65.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13224-PA | 265 | GK13224-PA | 28..265 | 2..242 | 550 | 58.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25926-PA | 240 | GE25926-PA | 1..240 | 1..242 | 1156 | 93.4 | Plus |
Translation from 137 to 865
> RE53745.hyp MKPQSKRKSFPFNAPPPGGIMDFGFGSCSTFGNSVENDLVKWQHKRKSEQ PAPAVLPPKMLITEERITQHFSGLSLDPKINVAATAVVSNNNSVASVTGG LATDDIPSTSTGKTHHPNPAYQMAAMELEQKLRNANRIVICDGLKPGSGP GSAPPVIPPEWLIKSIPRPCTALVPWQPSPLQMPMPMPEVKMVSPQIVAP MAAAPAVQELDDYDDDLEFFENNNTCSVNLNKSEQEHMDEDL*