BDGP Sequence Production Resources |
Search the DGRC for RE54151
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 541 |
Well: | 51 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG8366-RA |
Protein status: | RE54151.pep: gold |
Preliminary Size: | 1368 |
Sequenced Size: | 1486 |
Gene | Date | Evidence |
---|---|---|
CG8366 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8366 | 2002-02-22 | Blastp of sequenced clone |
CG8366 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8366 | 2008-04-29 | Release 5.5 accounting |
CG8366 | 2008-08-15 | Release 5.9 accounting |
CG8366 | 2008-12-18 | 5.12 accounting |
1486 bp (1486 high quality bases) assembled on 2002-02-22
GenBank Submission: AY084180
> RE54151.complete AGTTGTGGCCCAATGTTTATTTTTAGCACACCATCTAATTTTCTACTTCT TGTACTCAAATTTTGGTTAAAACAAAATGAGGGGCATGATAATTGTGCCC ATGGACCTGGAACCCGGCTTCCGCAAAGCAGACATACACAATATACCCGC TTTGAACAGCGGAATGGTGTACAATTTTTGTCTATCCGGCGCATCTGAGA AATCAAAACAAATACCAACGAATAGATGTGATCTCCTCACGGATTACGTC CAGGTGCGCAGACATGGCGACGTGTGCGAACTCAAGGGACTCGTGTTTTC TGCCACCGACTTCGCCAACACGGTAACTCACGCCAATGTATCGCTTAAGA TCGTCGAAAGTGCTCAGATGATCATGGACGGTCAATGCAGCCTGTGCACT GCAGCATGTACTTGTGCCCACATCGTGGCCTTCACCTTCTGGCTGCTAAA CAAGAGCACAGATCGAAATCCCTCGGCTGTGGTGGAGTTTTGGGGCCACG AGTTGGAAAATCTGGTGCAACCGGAGCCCACAACTGCTACTCGAATATGT GATATAATTCCCAAGGATGATGTGCGAATGGAAAGCGAACTAAACTCGAA AGAACTTAGCGCCAGCGAGGGAGAGGCTTTCCTAGTGACCATTCTGAATG AACTGGCCGACTGTGGCAGGGACTCGGCGCTCTACCGGCAATGTGTGGAG ACCACCGATGAGTTCGAGCCCATGTTCGTACACCATGTGCTGCTCCGAGC AAATGAGTACAATGTCGTCGATCCGTCCAGCTATGTGCAACACATGGAGG CACAGGCACATACGGGTATTATCGAAAGTCTGTACGAGGCAACGCGAAGC AAATACAAATCCCGATTGTGGGTGGAGGTACAGTATATGCGCATCCGTTG CTCCATGATGCACATGATCATAAGCCGCAAAACCTCTGATGATGACGATC AAATCTTCAATATGATGTTTTGCAGAGGACGTGACAAGAATAACGAGGAT CGGGTGCAGCAGAAGGAGCACAAGCGCTTCATATTGAAACAGACTGAGAA GCTGGAGAACAAGAACTACTTAGAATGCGGTCTGATCCTGCACGAGAACT TCCCCTTCCTGTGCGCCGCCCCTGATGGCATCACGGACGATCACATTGTC GAAATCAAATCACCAAAGACTGACGAGGACTTCGAGAAGTACCTCGAGGC ACGCGAATCTATTGCACCCAAGTACATGGCCCAAATACAAATCCAGATGT TTGCGGCGAATGTTAAAAAGGCGCTCTACTGCGTGCTAAGTCCCACGTTC GAGAGCAACGGAGCACTACACTACGTTTGGGTACAGGCGGATCCGGAATT CGTTAGCAGTTTGCTGAGCATGGCTGAAGACTTCTGGCGGGACGTTGTCT TTCCCCGCCTATTGAATATCTACCCCCAGTGCCCAGGTCAATAAATACAT ACACATTCACTGTGCTGCTCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 11842843..11843904 | 408..1469 | 5295 | 99.9 | Plus |
chr2R | 21145070 | chr2R | 11842314..11842523 | 4..213 | 1050 | 100 | Plus |
chr2R | 21145070 | chr2R | 11842592..11842787 | 214..409 | 980 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 15955574..15956635 | 408..1469 | 5295 | 99.9 | Plus |
2R | 25286936 | 2R | 15955045..15955254 | 4..213 | 1050 | 100 | Plus |
2R | 25286936 | 2R | 15955323..15955518 | 214..409 | 980 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 15956773..15957834 | 408..1469 | 5295 | 99.9 | Plus |
2R | 25260384 | 2R | 15956244..15956453 | 4..213 | 1050 | 100 | Plus |
2R | 25260384 | 2R | 15956522..15956717 | 214..409 | 980 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 11842311..11842523 | 1..213 | 99 | -> | Plus |
chr2R | 11842592..11842785 | 214..407 | 100 | -> | Plus |
chr2R | 11842843..11843904 | 408..1470 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8366-RA | 1..1368 | 77..1444 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8366-RA | 1..1368 | 77..1444 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8366-RA | 1..1368 | 77..1444 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8366-RA | 1..1368 | 77..1444 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8366-RA | 1..1368 | 77..1444 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8366-RA | 1..1469 | 1..1470 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8366-RA | 1..1469 | 1..1470 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8366-RA | 3..1471 | 1..1470 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8366-RA | 1..1469 | 1..1470 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8366-RA | 3..1471 | 1..1470 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15955042..15955254 | 1..213 | 99 | -> | Plus |
2R | 15955323..15955516 | 214..407 | 100 | -> | Plus |
2R | 15955574..15956635 | 408..1470 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15955042..15955254 | 1..213 | 99 | -> | Plus |
2R | 15955323..15955516 | 214..407 | 100 | -> | Plus |
2R | 15955574..15956635 | 408..1470 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15955042..15955254 | 1..213 | 99 | -> | Plus |
2R | 15955323..15955516 | 214..407 | 100 | -> | Plus |
2R | 15955574..15956635 | 408..1470 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 11842547..11842759 | 1..213 | 99 | -> | Plus |
arm_2R | 11842828..11843021 | 214..407 | 100 | -> | Plus |
arm_2R | 11843079..11844140 | 408..1470 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15956522..15956715 | 214..407 | 100 | -> | Plus |
2R | 15956241..15956453 | 1..213 | 99 | -> | Plus |
2R | 15956773..15957834 | 408..1470 | 99 | Plus |
Translation from 76 to 1443
> RE54151.pep MRGMIIVPMDLEPGFRKADIHNIPALNSGMVYNFCLSGASEKSKQIPTNR CDLLTDYVQVRRHGDVCELKGLVFSATDFANTVTHANVSLKIVESAQMIM DGQCSLCTAACTCAHIVAFTFWLLNKSTDRNPSAVVEFWGHELENLVQPE PTTATRICDIIPKDDVRMESELNSKELSASEGEAFLVTILNELADCGRDS ALYRQCVETTDEFEPMFVHHVLLRANEYNVVDPSSYVQHMEAQAHTGIIE SLYEATRSKYKSRLWVEVQYMRIRCSMMHMIISRKTSDDDDQIFNMMFCR GRDKNNEDRVQQKEHKRFILKQTEKLENKNYLECGLILHENFPFLCAAPD GITDDHIVEIKSPKTDEDFEKYLEARESIAPKYMAQIQIQMFAANVKKAL YCVLSPTFESNGALHYVWVQADPEFVSSLLSMAEDFWRDVVFPRLLNIYP QCPGQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11550-PA | 451 | GF11550-PA | 1..451 | 1..451 | 1969 | 76.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20555-PA | 453 | GG20555-PA | 1..450 | 1..450 | 2258 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22056-PA | 447 | GH22056-PA | 1..445 | 1..451 | 1735 | 68.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8366-PA | 455 | CG8366-PA | 1..455 | 1..455 | 2407 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19141-PA | 450 | GI19141-PA | 1..448 | 1..451 | 1758 | 69 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20656-PA | 456 | GL20656-PA | 1..451 | 1..451 | 1834 | 70.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21023-PA | 456 | GA21023-PA | 1..451 | 1..451 | 1839 | 70.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21648-PA | 455 | GM21648-PA | 1..455 | 1..455 | 2405 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11147-PA | 455 | GD11147-PA | 1..455 | 1..455 | 2410 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22274-PA | 450 | GJ22274-PA | 1..448 | 1..451 | 1763 | 68.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22194-PA | 448 | GK22194-PA | 1..446 | 1..451 | 1732 | 68.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11740-PA | 453 | GE11740-PA | 1..451 | 1..451 | 2302 | 92.9 | Plus |
Translation from 76 to 1443
> RE54151.hyp MRGMIIVPMDLEPGFRKADIHNIPALNSGMVYNFCLSGASEKSKQIPTNR CDLLTDYVQVRRHGDVCELKGLVFSATDFANTVTHANVSLKIVESAQMIM DGQCSLCTAACTCAHIVAFTFWLLNKSTDRNPSAVVEFWGHELENLVQPE PTTATRICDIIPKDDVRMESELNSKELSASEGEAFLVTILNELADCGRDS ALYRQCVETTDEFEPMFVHHVLLRANEYNVVDPSSYVQHMEAQAHTGIIE SLYEATRSKYKSRLWVEVQYMRIRCSMMHMIISRKTSDDDDQIFNMMFCR GRDKNNEDRVQQKEHKRFILKQTEKLENKNYLECGLILHENFPFLCAAPD GITDDHIVEIKSPKTDEDFEKYLEARESIAPKYMAQIQIQMFAANVKKAL YCVLSPTFESNGALHYVWVQADPEFVSSLLSMAEDFWRDVVFPRLLNIYP QCPGQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8366-PA | 455 | CG8366-PA | 1..455 | 1..455 | 2407 | 100 | Plus |