Clone RE54280 Report

Search the DGRC for RE54280

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:542
Well:80
Vector:pFlc-1
Associated Gene/Transcriptsim-RA
Protein status:RE54280.pep: gold
Preliminary Size:1905
Sequenced Size:2838

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7771 2002-01-01 Sim4 clustering to Release 2
CG7771 2002-07-03 Blastp of sequenced clone
CG7771 2003-01-01 Sim4 clustering to Release 3
sim 2008-04-29 Release 5.5 accounting
sim 2008-08-15 Release 5.9 accounting
sim 2008-12-18 5.12 accounting

Clone Sequence Records

RE54280.complete Sequence

2838 bp (2838 high quality bases) assembled on 2002-07-03

GenBank Submission: AY129457

> RE54280.complete
TGGGTTGCAAACAGGTGATTGCAGGGATATGAGCAAGTGCTGAGAAGGTG
CTCGCAACAGTCTCAAAGCAGGATCTATAAAAAAGGATATCTTTAAAATG
ACTAACCATCGGCGAGTGCGCAAGGATTGCTATGAGAGCAGATTGCATGA
TATAGCCAAAACGTGTGCCATGAAGGAGAAAAGCAAAAATGCGGCACGCA
CGCGACGTGAAAAGGAAAACACGGAATTCTGTGAATTGGCCAAATTACTG
CCGCTGCCGGCGGCGATTACTTCGCAACTGGACAAGGCCTCCGTCATCCG
GCTGACCACGTCGTATTTGAAAATGCGCCAAGTCTTTCCCGATGGTCTTG
GCGAAGCCTGGGGCTCATCGCCTGCCATGCAACGCGGCGCCACCATCAAG
GAGCTGGGCTCCCATCTGCTGCAGACGCTGGACGGATTCATCTTCGTGGT
GGCTCCGGATGGCAAAATCATGTACATCTCGGAAACGGCCTCCGTGCATT
TGGGCCTCAGTCAGGTTGAGCTGACGGGCAACTCGATATTCGAGTACATA
CACAACTACGATCAGGACGAGATGAATGCCATTTTGTCGCTGCATCCGCA
CATCAACCAGCATCCACTCGCCCAGACGCACACGCCCATCGGCAGTCCCA
ATGGCGTCCAGCATCCATCCGCCTACGACCACGATCGCGGATCGCACACC
ATCGAGATCGAGAAGACCTTCTTCCTGCGCATGAAGTGCGTCCTGGCCAA
AAGGAACGCGGGCCTCACCACCTCCGGATTTAAGGTGATACACTGCTCCG
GCTATCTGAAGGCTCGCATCTATCCCGATCGCGGGGATGGACAGGGCAGC
CTCATCCAGAATCTCGGCCTGGTGGCCGTCGGTCACTCGCTGCCTTCATC
CGCCATCACGGAAATCAAGCTGCACCAGAATATGTTCATGTTCCGGGCCA
AGCTGGACATGAAGCTCATCTTCTTCGATGCACGCGTATCGCAGCTAACA
GGATACGAGCCGCAGGACCTCATCGAGAAGACCCTGTATCAGTATATCCA
CGCCGCGGACATCATGGCCATGCGCTGCTCTCATCAAATCCTGCTGTACA
AAGGACAAGTGACCACCAAGTACTACCGCTTCCTCACCAAAGGCGGCGGC
TGGGTGTGGGTGCAGTCGTACGCGACACTGGTGCACAATTCGCGATCCTC
GCGAGAAGTGTTCATCGTGAGCGTGAACTATGTGCTGAGCGAACGAGAGG
TGAAAGACTTGGTGCTGAACGAGATTCAGACGGGCGTTGTGAAGCGGGAG
CCCATATCGCCGGCGGCTCAAGCGGCACAGGCAGCTCAAGCGGCCCAAGC
GGCCCAAGCGGCACAGGCGGCACAGGCGGCACATGTGGCTCAAGCGGTGC
AGGCCCAGGTGGTGGTGGTGCCCCAGCAGTCGGTGGTGGTGCAGCCGCAG
TGCGCCGGAGCAACGGGTCAGCCGGTGGGTCCGGGTACGCCAGTTAGTCT
GGCCCTCAGTGCAAGTCCCAAGCTGGATCCGTATTTCGAGCCAGAGCTGC
CGCTGCAGCCGGCCGTAACGCCCGTGCCCCCAACGAATAATAGTAGTAGT
AGTAGCAACAATAACAACGGCGTGTGGCACCACCATCATGTGCAACAGCA
GCAGCAGTCCGGCAGCATGGATCACGATAGCCTGAGTTACACGCAGCTTT
ATCCGCCCTTGAACGACCTGGTGGTGAGCTCGAGCAGCAGTGTGGGCGGT
GGCACCGCCTCAAGTGCGGGCGGTGGATCCAGTGCGTCGGCCTCGTCCTC
CGGCGTTTACTCCACGGAGATGCAGTATCCGGACACGACCACCGGCAACC
TGTACTACAATAACAACAATCACTATTACTATGACTACGATGCGACGGTG
GATGTGGCCACCTCGATGATACGCCCATTCTCGGCCAATTCGAATAGCTG
CTCGAGCAGTTCGGAGAGCGAAAGGCAGCTGTCCACCGGAAATGCCTCGA
TTGTGAACGAAACATCGCCCTCACAGACGACCTACAGCGATCTGAGTCAC
AACTTCGAGCTGAGCTACTTCTCCGACAACAGTTCGCAACAGCATCAGCA
TCAGCAGCAGCAGCAGCATCTGATGGAGCAGCAGCATCTGCAATACCAAT
ACGCCACCTGGTGATCCTAAAAATGTAAATAACCAAATGTTGGACGATGA
GCCTTGACTGCTACTGTACTGTTGTTTATAAAACGTCGACTGCACCCACC
CCACCATCCGTTGCAATGTTATATACACCTCTGAGTTCTCAGTTCGAAAT
TGTAATATGTGGCTGAGCCACACACCATCTGAATTTCAGGACCTCCTCTA
TGCCTCTATTTTATTTATTTAACACCCCCACCATGCATTACCCAATGCAA
TGCGTTCGCGTTAATTGTGCAGTGTAAAGTTACAAAGAAATTGATACAAA
ATGCTAAGAAATTAAGAATGCGGAATGATCGTTGTTAACAAATGCAAAAG
CAAATACAAATTCTAATAATAAATAGTTGTAAGGCCTAACTGTAAACTGT
TCATACAAACTAACTTAAATTAATTGCACATACTTATACTTATAACTATA
TAGTAAAGCGCATACACTTGGCCCCCATAATCATGCATACACATCGGATC
TACGAATATACATATGTATATGCAATAATGTGTAAATAGTGCAGGGTCCG
CTCCACTATGCAGTTAACGAATATGATCTTCATAAGTCAAGTAAATAATT
GTAAATGTAAAATCTATTATTATCGAGAATTTTTCTAATTTGAATAAACA
AATTATTACGTGGGTGAACAATAAAAAAAAAAAAAAAA

RE54280.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:44:06
Subject Length Description Subject Range Query Range Score Percent Strand
sim-RA 2926 sim-RA 4..2829 4..2829 14115 99.9 Plus
sim.h 3286 sim.h 509..3189 149..2829 13390 99.9 Plus
sim.c 2950 sim.c 641..2853 617..2829 11050 99.9 Plus
sim.c 2950 sim.c 4..616 4..616 3065 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 03:40:25
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 8901581..8903327 1092..2822 8400 98.9 Plus
chr3R 27901430 chr3R 8900256..8900463 777..984 1010 99 Plus
chr3R 27901430 chr3R 8897835..8898032 149..346 990 100 Plus
chr3R 27901430 chr3R 8899265..8899437 344..516 865 100 Plus
chr3R 27901430 chr3R 8900024..8900193 617..786 850 100 Plus
chr3R 27901430 chr3R 8897579..8897724 4..149 715 99.3 Plus
chr3R 27901430 chr3R 8901385..8901492 984..1091 540 100 Plus
chr3R 27901430 chr3R 8899753..8899857 512..616 525 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:02:53 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 03:40:23
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13076394..13078131 1092..2829 8675 99.9 Plus
3R 32079331 3R 13075069..13075276 777..984 1025 99.5 Plus
3R 32079331 3R 13072661..13072858 149..346 990 100 Plus
3R 32079331 3R 13074079..13074251 344..516 865 100 Plus
3R 32079331 3R 13074837..13075006 617..786 850 100 Plus
3R 32079331 3R 13072405..13072550 4..149 730 100 Plus
3R 32079331 3R 13076198..13076305 984..1091 540 100 Plus
3R 32079331 3R 13074568..13074672 512..616 525 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:17:15
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 12817225..12818962 1092..2829 8675 99.9 Plus
3R 31820162 3R 12815900..12816107 777..984 1025 99.5 Plus
3R 31820162 3R 12813492..12813689 149..346 990 100 Plus
3R 31820162 3R 12814910..12815082 344..516 865 100 Plus
3R 31820162 3R 12815668..12815837 617..786 850 100 Plus
3R 31820162 3R 12813236..12813381 4..149 730 100 Plus
3R 31820162 3R 12817029..12817136 984..1091 540 100 Plus
3R 31820162 3R 12815399..12815503 512..616 525 100 Plus
Blast to na_te.dros performed 2019-03-16 03:40:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6721..6819 1559..1656 150 64 Plus
roo 9092 roo DM_ROO 9092bp 1077..1146 1586..1656 136 67.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2326..2403 1601..1681 119 64.6 Plus

RE54280.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 03:41:19 Download gff for RE54280.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 8900024..8900191 617..784 100 -> Plus
chr3R 8897576..8897724 1..149 97 -> Plus
chr3R 8897836..8898030 150..344 100 -> Plus
chr3R 8899266..8899435 345..514 100 -> Plus
chr3R 8899756..8899857 515..616 100 -> Plus
chr3R 8900264..8900463 785..984 99 -> Plus
chr3R 8901386..8901492 985..1091 100 -> Plus
chr3R 8901581..8901801 1092..1312 100 == Plus
chr3R 8901887..8902080 1398..1591 98 == Plus
chr3R 8902157..8903154 1668..2665 96 -> Plus
chr3R 8903173..8903327 2666..2822 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:23:13 Download gff for RE54280.complete
Subject Subject Range Query Range Percent Splice Strand
sim-RA 1..2067 98..2164 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:17:48 Download gff for RE54280.complete
Subject Subject Range Query Range Percent Splice Strand
sim-RA 1..2067 98..2164 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:47:41 Download gff for RE54280.complete
Subject Subject Range Query Range Percent Splice Strand
sim-RA 1..2067 98..2164 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:08:58 Download gff for RE54280.complete
Subject Subject Range Query Range Percent Splice Strand
sim-RA 1..2067 98..2164 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:11:00 Download gff for RE54280.complete
Subject Subject Range Query Range Percent Splice Strand
sim-RA 1..2067 98..2164 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:42:20 Download gff for RE54280.complete
Subject Subject Range Query Range Percent Splice Strand
sim-RA 1..2822 1..2822 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:17:48 Download gff for RE54280.complete
Subject Subject Range Query Range Percent Splice Strand
sim-RA 1..2822 1..2822 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:47:41 Download gff for RE54280.complete
Subject Subject Range Query Range Percent Splice Strand
sim-RA 4..2825 1..2822 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:08:58 Download gff for RE54280.complete
Subject Subject Range Query Range Percent Splice Strand
sim-RA 1..2822 1..2822 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:11:00 Download gff for RE54280.complete
Subject Subject Range Query Range Percent Splice Strand
sim-RA 4..2825 1..2822 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:41:19 Download gff for RE54280.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13074080..13074249 345..514 100 -> Plus
3R 13074571..13074672 515..616 100 -> Plus
3R 13074837..13075004 617..784 100 -> Plus
3R 13075077..13075276 785..984 100 -> Plus
3R 13076199..13076305 985..1091 100 -> Plus
3R 13072402..13072550 1..149 98 -> Plus
3R 13072662..13072856 150..344 100 -> Plus
3R 13076394..13078124 1092..2822 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:41:19 Download gff for RE54280.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13074080..13074249 345..514 100 -> Plus
3R 13074571..13074672 515..616 100 -> Plus
3R 13074837..13075004 617..784 100 -> Plus
3R 13075077..13075276 785..984 100 -> Plus
3R 13076199..13076305 985..1091 100 -> Plus
3R 13072402..13072550 1..149 98 -> Plus
3R 13072662..13072856 150..344 100 -> Plus
3R 13076394..13078124 1092..2822 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:41:19 Download gff for RE54280.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13074080..13074249 345..514 100 -> Plus
3R 13074571..13074672 515..616 100 -> Plus
3R 13074837..13075004 617..784 100 -> Plus
3R 13075077..13075276 785..984 100 -> Plus
3R 13076199..13076305 985..1091 100 -> Plus
3R 13072402..13072550 1..149 98 -> Plus
3R 13072662..13072856 150..344 100 -> Plus
3R 13076394..13078124 1092..2822 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:47:41 Download gff for RE54280.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8900293..8900394 515..616 100 -> Plus
arm_3R 8898124..8898272 1..149 98 -> Plus
arm_3R 8898384..8898578 150..344 100 -> Plus
arm_3R 8899802..8899971 345..514 100 -> Plus
arm_3R 8900559..8900726 617..784 100 -> Plus
arm_3R 8900799..8900998 785..984 100 -> Plus
arm_3R 8901921..8902027 985..1091 100 -> Plus
arm_3R 8902116..8903846 1092..2822 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:41:00 Download gff for RE54280.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12817225..12818955 1092..2822 99   Plus
3R 12813233..12813381 1..149 98 -> Plus
3R 12813493..12813687 150..344 100 -> Plus
3R 12814911..12815080 345..514 100 -> Plus
3R 12815402..12815503 515..616 100 -> Plus
3R 12815668..12815835 617..784 100 -> Plus
3R 12815908..12816107 785..984 100 -> Plus
3R 12817030..12817136 985..1091 100 -> Plus

RE54280.pep Sequence

Translation from 97 to 2163

> RE54280.pep
MTNHRRVRKDCYESRLHDIAKTCAMKEKSKNAARTRREKENTEFCELAKL
LPLPAAITSQLDKASVIRLTTSYLKMRQVFPDGLGEAWGSSPAMQRGATI
KELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTGNSIFEY
IHNYDQDEMNAILSLHPHINQHPLAQTHTPIGSPNGVQHPSAYDHDRGSH
TIEIEKTFFLRMKCVLAKRNAGLTTSGFKVIHCSGYLKARIYPDRGDGQG
SLIQNLGLVAVGHSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQL
TGYEPQDLIEKTLYQYIHAADIMAMRCSHQILLYKGQVTTKYYRFLTKGG
GWVWVQSYATLVHNSRSSREVFIVSVNYVLSEREVKDLVLNEIQTGVVKR
EPISPAAQAAQAAQAAQAAQAAQAAQAAHVAQAVQAQVVVVPQQSVVVQP
QCAGATGQPVGPGTPVSLALSASPKLDPYFEPELPLQPAVTPVPPTNNSS
SSSNNNNGVWHHHHVQQQQQSGSMDHDSLSYTQLYPPLNDLVVSSSSSVG
GGTASSAGGGSSASASSSGVYSTEMQYPDTTTGNLYYNNNNHYYYDYDAT
VDVATSMIRPFSANSNSCSSSSESERQLSTGNASIVNETSPSQTTYSDLS
HNFELSYFSDNSSQQHQHQQQQQHLMEQQHLQYQYATW*

RE54280.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 04:46:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17581-PA 746 GF17581-PA 1..648 1..663 2680 91.2 Plus
Dana\GF24890-PA 959 GF24890-PA 88..516 26..394 663 37 Plus
Dana\GF18823-PA 1505 GF18823-PA 66..417 26..386 491 32.6 Plus
Dana\GF16518-PA 1071 GF16518-PA 32..403 31..389 339 25.3 Plus
Dana\GF10846-PA 412 GF10846-PA 32..411 26..380 309 27.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 04:46:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19445-PA 698 GG19445-PA 1..698 1..688 3663 97.9 Plus
Dere\GG14662-PA 961 GG14662-PA 88..519 26..394 660 36.8 Plus
Dere\GG11733-PA 1493 GG11733-PA 69..420 26..386 507 33.2 Plus
Dere\GG19993-PA 1057 GG19993-PA 32..378 31..389 352 26.8 Plus
Dere\GG13369-PA 413 GG13369-PA 32..412 26..380 315 27.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 04:46:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18379-PA 774 GH18379-PA 1..683 1..677 2620 86.1 Plus
Dgri\GH19178-PA 1566 GH19178-PA 71..415 26..386 483 32.6 Plus
Dgri\GH15456-PA 1029 GH15456-PA 85..230 26..159 389 56.1 Plus
Dgri\GH23748-PA 490 GH23748-PA 85..230 26..159 385 56.1 Plus
Dgri\GH18248-PA 1082 GH18248-PA 32..378 31..389 348 26.8 Plus
Dgri\GH15456-PA 1029 GH15456-PA 301..517 205..394 336 32.7 Plus
Dgri\GH23748-PA 490 GH23748-PA 303..490 205..394 328 35.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:42:45
Subject Length Description Subject Range Query Range Score Percent Strand
sim-PA 688 CG7771-PA 1..688 1..688 3570 100 Plus
sim-PC 675 CG7771-PC 5..675 18..688 3469 99.9 Plus
sim-PB 664 CG7771-PB 1..664 25..688 3437 100 Plus
sim-PD 672 CG7771-PD 1..672 25..688 3418 98.8 Plus
trh-PG 923 CG42865-PG 88..481 26..391 671 41 Plus
trh-PB 929 CG6883-PB 88..487 26..391 665 40.3 Plus
trh-PC 966 CG42865-PC 125..524 26..391 665 40.3 Plus
trh-PE 952 CG42865-PE 88..510 26..391 641 38.3 Plus
trh-PF 989 CG42865-PF 125..547 26..391 641 38.3 Plus
trh-PA 958 CG6883-PA 88..516 26..391 635 37.8 Plus
trh-PD 1022 CG42865-PD 88..516 26..391 635 37.8 Plus
sima-PD 1593 CG45051-PD 150..560 16..450 471 29.8 Plus
sima-PA 1507 CG45051-PA 74..474 26..450 470 30.2 Plus
sima-PB 426 CG45051-PB 74..419 26..380 452 31.6 Plus
ss-PA 884 CG6993-PA 32..378 31..389 326 26.5 Plus
ss-PD 1015 CG6993-PD 32..378 31..389 326 26.5 Plus
ss-PC 1015 CG6993-PC 32..378 31..389 326 26.5 Plus
cyc-PA 413 CG8727-PA 32..411 26..379 304 27.2 Plus
tgo-PB 642 CG11987-PB 13..574 24..583 294 24.1 Plus
tgo-PA 642 CG11987-PA 13..574 24..583 294 24.1 Plus
Clk-PA 1023 CG7391-PA 12..368 26..385 258 24.8 Plus
Clk-PD 1027 CG7391-PD 4..372 13..385 254 24 Plus
Clk-PF 961 CG7391-PF 29..306 107..385 229 25.3 Plus
dysf-PB 884 CG32474-PB 119..487 27..391 198 21.1 Plus
dysf-PC 917 CG32474-PC 155..523 27..391 198 21.1 Plus
dysf-PD 920 CG32474-PD 155..523 27..391 198 21.1 Plus
Clk-PH 895 CG7391-PH 9..240 158..385 168 24.9 Plus
Clk-PG 895 CG7391-PG 9..240 158..385 168 24.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 04:46:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23369-PA 779 GI23369-PA 1..682 1..680 2631 85 Plus
Dmoj\GI16736-PA 985 GI16736-PA 85..513 26..394 678 38.1 Plus
Dmoj\GI23647-PA 1064 GI23647-PA 32..393 31..398 355 27 Plus
Dmoj\GI10175-PA 653 GI10175-PA 13..383 24..377 315 26.7 Plus
Dmoj\GI13667-PA 408 GI13667-PA 30..407 26..380 300 27.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 04:46:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24392-PA 764 GL24392-PA 1..668 1..677 2647 88 Plus
Dper\GL22243-PA 1100 GL22243-PA 32..378 31..389 346 26.8 Plus
Dper\GL22602-PA 1106 GL22602-PA 518..737 205..394 333 32.7 Plus
Dper\GL22602-PA 1106 GL22602-PA 314..442 43..159 324 54.2 Plus
Dper\GL15678-PA 436 GL15678-PA 56..435 26..380 303 26.4 Plus
Dper\GL17825-PA 1039 GL17825-PA 12..367 26..385 290 25 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 04:46:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26599-PA 767 GA26599-PA 1..673 1..677 2667 88.5 Plus
Dpse\GA20714-PA 1559 GA20714-PA 65..415 26..386 505 32.4 Plus
Dpse\GA19928-PA 982 GA19928-PA 80..225 26..159 388 56.1 Plus
Dpse\GA20013-PC 1142 GA20013-PC 8..368 23..389 354 26.3 Plus
Dpse\GA19928-PA 982 GA19928-PA 299..518 205..394 335 32.7 Plus
Dpse\GA21284-PA 436 GA21284-PA 56..435 26..380 311 26.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 04:46:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24085-PA 632 GM24085-PA 18..632 83..688 3209 98 Plus
Dsec\trh-PA 876 GM14278-PA 88..517 26..394 658 36.9 Plus
Dsec\GM12862-PA 1276 GM12862-PA 76..454 26..426 493 31.4 Plus
Dsec\GM16138-PA 413 GM16138-PA 32..412 26..380 318 27.8 Plus
Dsec\GM15436-PA 1077 GM15436-PA 32..405 31..389 305 24.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 04:46:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18883-PA 697 GD18883-PA 1..697 1..688 3669 98.3 Plus
Dsim\GD25707-PA 958 GD25707-PA 88..519 26..394 661 36.8 Plus
Dsim\sima-PA 1493 GD21504-PA 74..457 26..431 501 31.3 Plus
Dsim\GD12247-PA 413 GD12247-PA 32..412 26..380 314 27.6 Plus
Dsim\GD20292-PA 1075 GD20292-PA 32..407 31..389 304 24.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 04:46:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\sim-PA 761 GJ10364-PA 1..655 1..663 2679 88.7 Plus
Dvir\GJ12482-PA 992 GJ12482-PA 85..516 26..394 663 37.4 Plus
Dvir\GJ10784-PA 323 GJ10784-PA 14..299 26..321 389 31.5 Plus
Dvir\GJ23490-PA 1099 GJ23490-PA 32..378 31..389 348 26.8 Plus
Dvir\GJ10876-PA 649 GJ10876-PA 13..383 24..377 313 26.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 04:46:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22407-PA 743 GK22407-PA 1..648 1..666 2613 85.4 Plus
Dwil\GK13872-PA 1563 GK13872-PA 65..417 26..386 492 32.6 Plus
Dwil\GK20151-PA 996 GK20151-PA 89..234 26..159 389 56.1 Plus
Dwil\GK13504-PA 1031 GK13504-PA 32..378 31..389 347 26.8 Plus
Dwil\GK20151-PA 996 GK20151-PA 307..520 205..394 338 33.2 Plus
Dwil\GK17217-PA 410 GK17217-PA 32..409 26..380 304 26.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 04:46:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE26246-PA 699 GE26246-PA 1..699 1..688 3665 97.9 Plus
Dyak\GE21022-PA 958 GE21022-PA 88..519 26..394 659 36.8 Plus
Dyak\GE10859-PA 1517 GE10859-PA 72..423 26..386 508 32.6 Plus
Dyak\GE26316-PA 1062 GE26316-PA 32..378 31..389 352 27.1 Plus
Dyak\GE22462-PA 413 GE22462-PA 32..412 26..380 317 27.3 Plus

RE54280.hyp Sequence

Translation from 97 to 2163

> RE54280.hyp
MTNHRRVRKDCYESRLHDIAKTCAMKEKSKNAARTRREKENTEFCELAKL
LPLPAAITSQLDKASVIRLTTSYLKMRQVFPDGLGEAWGSSPAMQRGATI
KELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTGNSIFEY
IHNYDQDEMNAILSLHPHINQHPLAQTHTPIGSPNGVQHPSAYDHDRGSH
TIEIEKTFFLRMKCVLAKRNAGLTTSGFKVIHCSGYLKARIYPDRGDGQG
SLIQNLGLVAVGHSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQL
TGYEPQDLIEKTLYQYIHAADIMAMRCSHQILLYKGQVTTKYYRFLTKGG
GWVWVQSYATLVHNSRSSREVFIVSVNYVLSEREVKDLVLNEIQTGVVKR
EPISPAAQAAQAAQAAQAAQAAQAAQAAHVAQAVQAQVVVVPQQSVVVQP
QCAGATGQPVGPGTPVSLALSASPKLDPYFEPELPLQPAVTPVPPTNNSS
SSSNNNNGVWHHHHVQQQQQSGSMDHDSLSYTQLYPPLNDLVVSSSSSVG
GGTASSAGGGSSASASSSGVYSTEMQYPDTTTGNLYYNNNNHYYYDYDAT
VDVATSMIRPFSANSNSCSSSSESERQLSTGNASIVNETSPSQTTYSDLS
HNFELSYFSDNSSQQHQHQQQQQHLMEQQHLQYQYATW*

RE54280.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:38:31
Subject Length Description Subject Range Query Range Score Percent Strand
sim-PA 688 CG7771-PA 1..688 1..688 3570 100 Plus
sim-PC 675 CG7771-PC 5..675 18..688 3469 99.9 Plus
sim-PB 664 CG7771-PB 1..664 25..688 3437 100 Plus
sim-PD 672 CG7771-PD 1..672 25..688 3418 98.8 Plus
trh-PG 923 CG42865-PG 88..481 26..391 671 41 Plus