Clone RE54684 Report

Search the DGRC for RE54684

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:546
Well:84
Vector:pFlc-1
Associated Gene/TranscriptCG30438-RB
Protein status:RE54684.pep: gold
Sequenced Size:2437

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG30438 2001-12-14 Blastp of sequenced clone
CG1344 2002-01-01 Sim4 clustering to Release 2
CG30438 2008-04-29 Release 5.5 accounting
CG30438 2008-08-15 Release 5.9 accounting
CG30438 2008-12-18 5.12 accounting

Clone Sequence Records

RE54684.complete Sequence

2437 bp (2437 high quality bases) assembled on 2001-12-14

GenBank Submission: AY071467

> RE54684.complete
ACTTACTCCAGGCTTTCTTAGCAAGTTTTTGCTTGAGGCCAAGCTTAAAC
TGTAAATTGGCCGTAATATCTTTAATTATTGTCCCAAGCTATATACATAT
GTACATATATGTATTCTGGATCGAGTAAGCTTTAAGCTGCCGGTTTTTGA
GATGTTCAAATGCCTTTATGTGTAATATTTTATGGTTTAATGACAGAAAC
AACTTTAAATTATGTCTTCGGAATAAACGTTTTGTTCATTTAAATACTAC
AGCTTGGCTGCGTTACATTGAAGCTGAATATCAATAAAAAAAAAACAACA
TGCTTAAAAAAATTGCATTGTTTCTTATTATCTGGAGTTGCGGCACATTG
GCTGCGGACATCCTAATGGCTACGCAAGGCGGAACGAAGTCACACAAGAT
ACCATTCTGGGAATTGGCTAAGGGATTAATATCCAGAGGTCACAATATTA
CCTTTTTAAGTGGATTTCCTGCTGATTTTAATATTGAAGGACTGCTCGAG
GTAACACCAGCTGGTCTTGTTGAATATATCCACAACTATACGAATTGGGA
TCTCTTGGGCTCACGCATGGCGGGAGAAATGCCCATTAAGCCCTGGGACG
GACTGCGATACGCTTTCGAATCATGTGACGCAATGCTTCGTGACTCAGAA
ACAAAGGAGCTGACCAAGAAAAGCTTTGATTTGGCTATATTAGATGGAGC
TTTCCCAGAGTGCTTCTTGGGATTAATGTACGACTTCAAGATTCCATTTA
TGTACATAAACACGGTGGGATTCTACACAGGCAGTATCTCGACTGCAGGA
AATCCCGTTAGCTACGCTATTACTCCCAACTTCTATTCTCGATTTACGGA
CACAATGAATCTTTACGAACGTGCTATTAATACGGCCATGCAGATTGGAC
AAACACTGATGCACATGTATGTTATGCGTCGGACTCACCTTGTGATGCGA
GAGCACTTGGGTACTCAAATCCCGCATCCTTACGAAATGTCGCGCAACGT
GAGTTTCATTTTGCAAAATGGACACGCAGTTTTGTCTTATCCTAGAGCCT
TTAATCCGAATGTAGCAGAAGTGGCTTGCATTCATTGTAGGCCAGCTAGA
AAACTTCCTAGAAACCTTGAGGAATTCATCGGTGCTTCTGGAGCATCTGG
ATTTATTTACGTTTCTATGGGTTCCTCCGTAAAGGCCGCGAACATGCCAG
AGGCGTTGCGTCACATGCTTGTAAAGACCTTTGCACGTCTTCCCTATCAT
GTGCTATGGAAGTATGAAGGCAGTTCGACAGATATAAAAGACATCACATC
AAACGTAAAACTTTCACGGTGGTTACCGCAGCAGGACATTTTGGGACATC
CCAAGCTTAGAGCGTTTGTAACACATGGAGGCTTGCTAAGCATGTTTGAG
ACGGTATATCACGGAGTACCCGTTGTTACAATGCCGGTATTCTGCGACCA
CGATGTTAACTCAGCCAAGGCCGAGGTCGATGGATATGCAATAAAGTTAG
ATCTTCAGACGCTGTCAGCCAATCAGTTGTACAAGGCTATTATGAAAGTG
ATTCACAATCCTCGCTACAGAAATTCAGCACGACATCGGCAAAAGCTGTT
CCTGGACCAGCGCTCAACAGCGCTAGATACTGCCATATACTGGACCGAAT
ATGTGCTGCGACATAATGGCGCTTATCATCTACAGACTCCATCCCGAAAT
ATGACATGGTGGCAATACTACTTACTCGACGTAGTTGCGGTTTATTTAAT
TTTACTTTACGTCCTGATCTTAGCACTGAGGCGCATTGATTTTCCATACG
AGAAGGTGCGGAGTCTTTATTCCCTTATGGCTCCTTTTATTACAATAGCA
AAAACGAAGTCAAAGAAGATTTAAAAGGTCTCTATAATATTACTAGAGTG
GGGTGCTTAAATCTTAAGAAGAATACGTTGCGATTCAAAGCGTCAAGCAA
ATGGATCGATTAGAAACGTTCGCCTATTCCAAATATTGTAACATTGTAAT
TTGAAATTATTTTAAAGAATATAAAAACACGCACACAATAACAAACAAAA
AATAAACAAAAGAAATCCCTCGGAAATGGAAAAGTGTATAAAGCCGTATT
TATCTACTTGATACTGAATTTAATACAAACCTCTGATATAATTAATTAAT
GACTTCTTAAAAATGGTAACTACTCTTCTGTCCAGAATTTAATGTAAATC
CCTATATTAAATATTAATAAGGACCCAAACAAGTGATTCAAATCATAATT
AAAAGGATACATTAAAAATTTTTGACTGTTCCAAAGATGGTATAAAACAA
TTATGTTTTACGACCTACATTAATATATAAAGGCATTAAATTATGATTTT
AATACAAGCTTGCTTTCCCTAAAACATCTTTAATAAGAATGTCTAAATAA
ATTACAATAAAGCGCATTTTCAAAAAAAAAAAAAAAA

RE54684.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:44:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG30438-RB 2432 CG30438-RB 1..2426 1..2426 12130 100 Plus
CG30438.b 2299 CG30438.b 163..2293 296..2426 10655 100 Plus
CG30438-RA 2374 CG30438-RA 377..2368 435..2426 9960 100 Plus
CG30438-RA 2374 CG30438-RA 1..378 1..378 1890 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:22:41
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 1435343..1436131 917..1705 3945 100 Plus
chr2R 21145070 chr2R 1436184..1436899 1706..2421 3505 99.3 Plus
chr2R 21145070 chr2R 1434984..1435280 621..917 1485 100 Plus
chr2R 21145070 chr2R 1384074..1384368 1..295 1475 100 Plus
chr2R 21145070 chr2R 1426599..1426785 434..620 935 100 Plus
chr2R 21145070 chr2R 1154874..1155126 1560..1299 780 87.4 Minus
chr2R 21145070 chr2R 1155264..1155499 874..621 755 87.4 Minus
chr2R 21145070 chr2R 1414649..1414732 296..379 420 100 Plus
chr2R 21145070 chr2R 1416110..1416169 377..436 300 100 Plus
chr2R 21145070 chr2R 1155130..1155180 1269..1219 210 94.1 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:03:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:22:39
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 5547987..5548775 917..1705 3945 100 Plus
2R 25286936 2R 5548828..5549548 1706..2426 3605 100 Plus
2R 25286936 2R 5547628..5547924 621..917 1485 100 Plus
2R 25286936 2R 5496679..5496973 1..295 1475 100 Plus
2R 25286936 2R 5539243..5539429 434..620 935 100 Plus
2R 25286936 2R 5267417..5267669 1560..1299 780 87.4 Minus
2R 25286936 2R 5267807..5268042 874..621 755 87.4 Minus
2R 25286936 2R 5527293..5527376 296..379 420 100 Plus
2R 25286936 2R 5528754..5528813 377..436 300 100 Plus
2R 25286936 2R 5267673..5267723 1269..1219 210 94.1 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:11:22
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 5549186..5549974 917..1705 3945 100 Plus
2R 25260384 2R 5550027..5550747 1706..2426 3605 100 Plus
2R 25260384 2R 5548827..5549123 621..917 1485 100 Plus
2R 25260384 2R 5497878..5498172 1..295 1475 100 Plus
2R 25260384 2R 5540442..5540628 434..620 935 100 Plus
2R 25260384 2R 5269006..5269152 874..728 615 94.5 Minus
2R 25260384 2R 5268616..5268786 1560..1390 555 88.3 Minus
2R 25260384 2R 5528492..5528575 296..379 420 100 Plus
2R 25260384 2R 5269151..5269241 711..621 365 93.4 Minus
2R 25260384 2R 5268785..5268868 1382..1299 360 95.2 Minus
2R 25260384 2R 5529953..5530012 377..436 300 100 Plus
2R 25260384 2R 5268872..5268922 1269..1219 210 94.1 Minus
2R 25260384 2R 5268494..5268533 2425..2386 155 92.5 Minus
Blast to na_te.dros performed 2019-03-16 02:22:40
Subject Length Description Subject Range Query Range Score Percent Strand
Stalker2 7672 Stalker2 STALKER2 7672bp 1290..1416 198..331 151 63 Plus
Cr1a 4470 Cr1a DMCR1A 4470bp 4271..4340 2248..2185 120 68.6 Minus

RE54684.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:23:32 Download gff for RE54684.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 1384074..1384368 1..295 100 -> Plus
chr2R 1414649..1414731 296..378 100 -> Plus
chr2R 1416112..1416169 379..436 100 -> Plus
chr2R 1426602..1426785 437..620 100 -> Plus
chr2R 1434984..1435280 621..917 100 -> Plus
chr2R 1435344..1436131 918..1705 100 -> Plus
chr2R 1436184..1436899 1706..2421 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:05:24 Download gff for RE54684.complete
Subject Subject Range Query Range Percent Splice Strand
CG30438-RD 1..1575 300..1874 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:11:24 Download gff for RE54684.complete
Subject Subject Range Query Range Percent Splice Strand
CG30438-RD 1..1575 300..1874 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:20:04 Download gff for RE54684.complete
Subject Subject Range Query Range Percent Splice Strand
CG30438-RC 1..1575 300..1874 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:35:39 Download gff for RE54684.complete
Subject Subject Range Query Range Percent Splice Strand
CG30438-RD 1..1575 300..1874 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:07:51 Download gff for RE54684.complete
Subject Subject Range Query Range Percent Splice Strand
CG30438-RC 1..1575 300..1874 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:05:23 Download gff for RE54684.complete
Subject Subject Range Query Range Percent Splice Strand
CG30438-RB 1..2421 1..2421 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:11:24 Download gff for RE54684.complete
Subject Subject Range Query Range Percent Splice Strand
CG30438-RB 1..2421 1..2421 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:20:04 Download gff for RE54684.complete
Subject Subject Range Query Range Percent Splice Strand
CG30438-RB 6..2426 1..2421 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:35:39 Download gff for RE54684.complete
Subject Subject Range Query Range Percent Splice Strand
CG30438-RB 1..2421 1..2421 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:07:51 Download gff for RE54684.complete
Subject Subject Range Query Range Percent Splice Strand
CG30438-RB 6..2426 1..2421 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:23:32 Download gff for RE54684.complete
Subject Subject Range Query Range Percent Splice Strand
2R 5496679..5496973 1..295 100 -> Plus
2R 5527293..5527375 296..378 100 -> Plus
2R 5528756..5528813 379..436 100 -> Plus
2R 5539246..5539429 437..620 100 -> Plus
2R 5547628..5547924 621..917 100 -> Plus
2R 5547988..5548775 918..1705 100 -> Plus
2R 5548828..5549543 1706..2421 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:23:32 Download gff for RE54684.complete
Subject Subject Range Query Range Percent Splice Strand
2R 5496679..5496973 1..295 100 -> Plus
2R 5527293..5527375 296..378 100 -> Plus
2R 5528756..5528813 379..436 100 -> Plus
2R 5539246..5539429 437..620 100 -> Plus
2R 5547628..5547924 621..917 100 -> Plus
2R 5547988..5548775 918..1705 100 -> Plus
2R 5548828..5549543 1706..2421 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:23:32 Download gff for RE54684.complete
Subject Subject Range Query Range Percent Splice Strand
2R 5496679..5496973 1..295 100 -> Plus
2R 5527293..5527375 296..378 100 -> Plus
2R 5528756..5528813 379..436 100 -> Plus
2R 5539246..5539429 437..620 100 -> Plus
2R 5547628..5547924 621..917 100 -> Plus
2R 5547988..5548775 918..1705 100 -> Plus
2R 5548828..5549543 1706..2421 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:20:04 Download gff for RE54684.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 1384184..1384478 1..295 100 -> Plus
arm_2R 1414798..1414880 296..378 100 -> Plus
arm_2R 1416261..1416318 379..436 100 -> Plus
arm_2R 1426751..1426934 437..620 100 -> Plus
arm_2R 1435133..1435429 621..917 100 -> Plus
arm_2R 1435493..1436280 918..1705 100 -> Plus
arm_2R 1436333..1437048 1706..2421 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:12:56 Download gff for RE54684.complete
Subject Subject Range Query Range Percent Splice Strand
2R 5497878..5498172 1..295 100 -> Plus
2R 5528492..5528574 296..378 100 -> Plus
2R 5529955..5530012 379..436 100 -> Plus
2R 5540445..5540628 437..620 100 -> Plus
2R 5548827..5549123 621..917 100 -> Plus
2R 5549187..5549974 918..1705 100 -> Plus
2R 5550027..5550742 1706..2421 100   Plus

RE54684.pep Sequence

Translation from 299 to 1873

> RE54684.pep
MLKKIALFLIIWSCGTLAADILMATQGGTKSHKIPFWELAKGLISRGHNI
TFLSGFPADFNIEGLLEVTPAGLVEYIHNYTNWDLLGSRMAGEMPIKPWD
GLRYAFESCDAMLRDSETKELTKKSFDLAILDGAFPECFLGLMYDFKIPF
MYINTVGFYTGSISTAGNPVSYAITPNFYSRFTDTMNLYERAINTAMQIG
QTLMHMYVMRRTHLVMREHLGTQIPHPYEMSRNVSFILQNGHAVLSYPRA
FNPNVAEVACIHCRPARKLPRNLEEFIGASGASGFIYVSMGSSVKAANMP
EALRHMLVKTFARLPYHVLWKYEGSSTDIKDITSNVKLSRWLPQQDILGH
PKLRAFVTHGGLLSMFETVYHGVPVVTMPVFCDHDVNSAKAEVDGYAIKL
DLQTLSANQLYKAIMKVIHNPRYRNSARHRQKLFLDQRSTALDTAIYWTE
YVLRHNGAYHLQTPSRNMTWWQYYLLDVVAVYLILLYVLILALRRIDFPY
EKVRSLYSLMAPFITIAKTKSKKI*

RE54684.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 21:15:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11027-PA 524 GF11027-PA 1..523 1..523 2359 82.6 Plus
Dana\GF16732-PA 520 GF16732-PA 11..496 5..490 689 32.4 Plus
Dana\GF19938-PA 520 GF19938-PA 4..485 2..481 681 32.8 Plus
Dana\GF16731-PA 528 GF16731-PA 20..513 13..507 640 32.1 Plus
Dana\GF12116-PA 492 GF12116-PA 6..470 39..493 638 31.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 21:15:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23164-PA 524 GG23164-PA 1..524 1..524 2692 94.5 Plus
Dere\GG17245-PA 519 GG17245-PA 23..493 22..493 694 33.9 Plus
Dere\GG17891-PA 522 GG17891-PA 25..499 22..491 679 32.6 Plus
Dere\GG17244-PA 515 GG17244-PA 5..496 4..491 666 32.3 Plus
Dere\GG14517-PA 492 GG14517-PA 5..462 39..486 641 31.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 21:15:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16830-PA 522 GH16830-PA 1..522 1..524 2208 75.2 Plus
Dgri\GH18165-PA 518 GH18165-PA 3..511 2..523 650 31.1 Plus
Dgri\GH18166-PA 518 GH18166-PA 15..503 14..496 646 31 Plus
Dgri\GH19423-PA 524 GH19423-PA 45..504 41..498 625 30.9 Plus
Dgri\GH11213-PA 533 GH11213-PA 16..529 7..524 619 27.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:32:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG30438-PE 524 CG30438-PE 1..524 1..524 2763 100 Plus
CG30438-PD 524 CG30438-PD 1..524 1..524 2763 100 Plus
CG30438-PC 524 CG30438-PC 1..524 1..524 2763 100 Plus
CG30438-PB 524 CG30438-PB 1..524 1..524 2763 100 Plus
CG30438-PA 435 CG30438-PA 1..435 90..524 2292 100 Plus
Ugt86Di-PB 519 CG6658-PB 23..493 22..493 682 33.6 Plus
Ugt86Di-PA 519 CG6658-PA 23..493 22..493 682 33.6 Plus
Ugt86Da-PA 528 CG18578-PA 11..505 5..496 656 32.1 Plus
Ugt86Dc-PA 521 CG4739-PA 25..519 22..522 652 31.1 Plus
CG6475-PD 526 CG6475-PD 30..516 30..506 650 31.4 Plus
Ugt35b-PA 516 CG6649-PA 5..499 4..493 647 32.7 Plus
Ugt35a-PA 537 CG6644-PA 51..516 38..496 639 32.8 Plus
CG4302-PA 532 CG4302-PA 37..520 30..499 633 32.3 Plus
CG15661-PB 530 CG15661-PB 36..510 30..493 577 29.2 Plus
CG15661-PA 530 CG15661-PA 36..510 30..493 577 29.2 Plus
CG10178-PB 530 CG10178-PB 37..500 31..490 577 28.4 Plus
CG10178-PA 530 CG10178-PA 37..500 31..490 577 28.4 Plus
Ugt86Dg-PB 527 CG17200-PB 37..497 32..493 560 29.6 Plus
Ugt86Dd-PB 517 CG6633-PB 46..496 41..493 555 32.3 Plus
Ugt86De-PA 527 CG6653-PA 41..498 32..490 525 29.3 Plus
CG17324-PB 525 CG17324-PB 20..503 18..496 524 28.2 Plus
CG31002-PA 521 CG31002-PA 40..507 41..498 510 29.8 Plus
Ugt37c1-PA 485 CG8652-PA 67..472 100..503 495 29.9 Plus
Ugt36Bc-PC 543 CG17932-PC 29..514 15..491 495 28 Plus
Ugt36Bc-PB 543 CG17932-PB 29..514 15..491 495 28 Plus
Ugt36Bc-PA 543 CG17932-PA 29..514 15..491 495 28 Plus
Ugt36Ba-PB 523 CG13270-PB 7..502 5..496 487 26.9 Plus
Ugt36Ba-PA 523 CG13270-PA 7..502 5..496 487 26.9 Plus
Ugt86Dh-PB 526 CG4772-PB 10..489 1..481 487 27.9 Plus
Ugt86Dh-PA 526 CG4772-PA 10..489 1..481 487 27.9 Plus
CG17322-PB 517 CG17322-PB 110..502 107..496 478 29.2 Plus
CG17322-PA 517 CG17322-PA 110..502 107..496 478 29.2 Plus
CG17322-PD 517 CG17322-PD 110..502 107..496 478 29.2 Plus
CG17322-PC 517 CG17322-PC 110..502 107..496 478 29.2 Plus
CG17323-PD 519 CG17323-PD 40..497 31..490 462 26.3 Plus
CG17323-PC 519 CG17323-PC 40..497 31..490 462 26.3 Plus
CG17323-PE 519 CG17323-PE 40..497 31..490 462 26.3 Plus
CG17323-PA 519 CG17323-PA 40..497 31..490 462 26.3 Plus
CG16732-PA 519 CG16732-PA 34..511 32..494 461 27.4 Plus
CG5724-PA 530 CG5724-PA 1..520 1..503 459 27.2 Plus
CG16732-PB 516 CG16732-PB 34..508 32..494 456 27.2 Plus
CG10170-PA 539 CG10170-PA 27..489 18..476 448 28.3 Plus
Ugt36Bb-PA 539 CG13271-PA 11..512 5..494 445 29.2 Plus
Ugt37b1-PA 537 CG9481-PA 8..496 5..483 440 26.4 Plus
CG3797-PB 636 CG3797-PB 4..499 5..484 438 26.2 Plus
CG3797-PA 636 CG3797-PA 4..499 5..484 438 26.2 Plus
CG5999-PB 530 CG5999-PB 9..519 1..502 432 27.1 Plus
Ugt86Dj-PA 529 CG15902-PA 117..483 112..477 426 28.5 Plus
CG10168-PA 540 CG10168-PA 46..494 39..486 413 26.4 Plus
Ugt37a1-PA 480 CG11012-PA 190..462 224..496 384 31.9 Plus
Dot-PB 537 CG2788-PB 143..514 124..493 379 27.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 21:15:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11922-PA 522 GI11922-PA 1..522 1..524 2250 79.3 Plus
Dmoj\GI22027-PA 541 GI22027-PA 28..497 18..474 1248 49.7 Plus
Dmoj\GI14134-PA 529 GI14134-PA 6..525 3..524 659 29.5 Plus
Dmoj\GI10119-PA 483 GI10119-PA 23..481 22..481 655 31.1 Plus
Dmoj\GI18315-PA 529 GI18315-PA 6..525 3..524 650 29.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 21:15:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11060-PA 524 GL11060-PA 1..524 1..524 2321 82.6 Plus
Dper\GL10763-PA 527 GL10763-PA 34..507 30..493 665 31.5 Plus
Dper\GL12557-PA 512 GL12557-PA 12..481 14..483 651 31.2 Plus
Dper\GL12044-PA 524 GL12044-PA 12..486 9..480 644 31.4 Plus
Dper\GL12559-PA 529 GL12559-PA 116..503 112..495 618 34 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 21:15:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24594-PA 524 GA24594-PA 1..524 1..524 2321 82.6 Plus
Dpse\GA19758-PA 520 GA19758-PA 1..500 2..496 684 33.5 Plus
Dpse\GA18395-PA 512 GA18395-PA 20..495 22..490 665 32 Plus
Dpse\GA18094-PA 528 GA18094-PA 19..508 14..493 661 31.6 Plus
Dpse\GA19751-PA 524 GA19751-PA 11..486 8..480 641 31.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 21:15:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16511-PA 462 GM16511-PA 1..462 1..524 2209 81.3 Plus
Dsec\GM11008-PA 554 GM11008-PA 36..547 7..509 665 31.7 Plus
Dsec\GM26123-PA 535 GM26123-PA 28..511 15..494 659 32.3 Plus
Dsec\GM26124-PA 519 GM26124-PA 5..482 4..479 643 33.3 Plus
Dsec\GM23919-PA 528 GM23919-PA 109..513 105..507 608 33.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 21:15:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10375-PA 486 GD10375-PA 1..486 1..524 2398 86.8 Plus
Dsim\GD20681-PA 535 GD20681-PA 28..504 15..491 642 31.9 Plus
Dsim\GD18731-PA 521 GD18731-PA 25..519 22..522 635 31.2 Plus
Dsim\GD18732-PA 527 GD18732-PA 54..504 48..496 621 33 Plus
Dsim\GD25218-PA 492 GD25218-PA 6..476 39..495 599 31.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 21:15:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13798-PA 522 GJ13798-PA 1..522 1..524 2275 78.5 Plus
Dvir\GJ17764-PA 529 GJ17764-PA 11..499 8..490 652 30.5 Plus
Dvir\GJ23340-PA 518 GJ23340-PA 21..481 20..481 646 31.3 Plus
Dvir\GJ23874-PA 524 GJ23874-PA 45..499 41..493 642 31.9 Plus
Dvir\GJ23873-PA 525 GJ23873-PA 19..506 15..494 632 33.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 21:15:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10762-PA 524 GK10762-PA 6..507 6..507 2281 83.1 Plus
Dwil\GK13997-PA 486 GK13997-PA 9..484 8..483 663 32.1 Plus
Dwil\GK13998-PA 531 GK13998-PA 56..505 48..494 654 32.2 Plus
Dwil\GK15804-PA 532 GK15804-PA 9..508 1..493 654 30 Plus
Dwil\GK15553-PA 525 GK15553-PA 32..522 31..523 647 30.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 21:15:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11306-PA 523 GE11306-PA 1..523 1..524 2631 92.2 Plus
Dyak\GE24648-PA 519 GE24648-PA 23..516 22..524 696 33.5 Plus
Dyak\GE24645-PA 519 GE24645-PA 5..486 4..483 671 33.2 Plus
Dyak\GE24978-PA 534 GE24978-PA 37..527 29..509 648 30.7 Plus
Dyak\GE24644-PA 530 GE24644-PA 28..511 15..494 631 33.1 Plus

RE54684.hyp Sequence

Translation from 299 to 1873

> RE54684.hyp
MLKKIALFLIIWSCGTLAADILMATQGGTKSHKIPFWELAKGLISRGHNI
TFLSGFPADFNIEGLLEVTPAGLVEYIHNYTNWDLLGSRMAGEMPIKPWD
GLRYAFESCDAMLRDSETKELTKKSFDLAILDGAFPECFLGLMYDFKIPF
MYINTVGFYTGSISTAGNPVSYAITPNFYSRFTDTMNLYERAINTAMQIG
QTLMHMYVMRRTHLVMREHLGTQIPHPYEMSRNVSFILQNGHAVLSYPRA
FNPNVAEVACIHCRPARKLPRNLEEFIGASGASGFIYVSMGSSVKAANMP
EALRHMLVKTFARLPYHVLWKYEGSSTDIKDITSNVKLSRWLPQQDILGH
PKLRAFVTHGGLLSMFETVYHGVPVVTMPVFCDHDVNSAKAEVDGYAIKL
DLQTLSANQLYKAIMKVIHNPRYRNSARHRQKLFLDQRSTALDTAIYWTE
YVLRHNGAYHLQTPSRNMTWWQYYLLDVVAVYLILLYVLILALRRIDFPY
EKVRSLYSLMAPFITIAKTKSKKI*

RE54684.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:59:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG30438-PE 524 CG30438-PE 1..524 1..524 2763 100 Plus
CG30438-PD 524 CG30438-PD 1..524 1..524 2763 100 Plus
CG30438-PC 524 CG30438-PC 1..524 1..524 2763 100 Plus
CG30438-PB 524 CG30438-PB 1..524 1..524 2763 100 Plus
CG30438-PA 435 CG30438-PA 1..435 90..524 2292 100 Plus