BDGP Sequence Production Resources |
Search the DGRC for RE54691
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 546 |
Well: | 91 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG3803-RA |
Protein status: | RE54691.pep: gold |
Preliminary Size: | 1208 |
Sequenced Size: | 1324 |
Gene | Date | Evidence |
---|---|---|
CG3803 | 2001-12-14 | Blastp of sequenced clone |
CG3803 | 2002-01-01 | Sim4 clustering to Release 2 |
CG3803 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3803 | 2008-04-29 | Release 5.5 accounting |
CG3803 | 2008-08-15 | Release 5.9 accounting |
CG3803 | 2008-12-18 | 5.12 accounting |
1324 bp (1324 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071468
> RE54691.complete GGCACTTGGTAGCGGCTTTGTAAATATAGTTAAAAAACAAAATATATCCT TTAATATTTGCTGTAAGCTTAAGTTAATCTCTCCAAACTTGAAATAACAC AATGCTGCGATTGCTCCAGAAGAGAACCAATCTCATAAAGCTAGTAGTAC CCGGCCCCCGACTTCACCAGACGATTGCGCAAACAGCGATAAAGGAAATC CCAGTGATAAAGCCCATCAGCACTCCGAAAAGCGACAAGACCGTCGGAAG ATGGTTCCTGGGAGTCAGCGGCATGGTCTTCGTGGCCGTTGGTCTAGGCG GAGTAACCCGACTGACAGAGTCCGGACTGTCCATGGTCACTTGGAAGCTG ACGGGTGAACGTATGCCCCGAACCCAGGAGGAATGGGTGCAGGAGTTCAA TCTCTACCAGCAATACCCAGAGTACAAGCTAAAGAATGTGAATATGACCG TGGAGGAGTTCAAGTTCATTTTCATGATGGAGTACATGCACAGGATGTGG GGTCGTGCCATCGGCGGGTTCTTCCTTTTGCCCGCTGTTTACTTCTGGAG AAAGGGATACTTCTGTGCGAAGACCAAGAAGAGCGTCCTGCTGCTGGGCA CACTGATTGGCCTGCAAGGTCTGATGGGATGGTACATGGTCAAGTCCGGG CTGGAAGACAGGTTCCAGGATCCCAACGACGTGCCACGGGTATCCCAGTA TAGATTGGCCTCCCACCTGGCAGCTGCCTTCGTCCTGTACTCACTCTCCC TGTCAAAGGCCATGTCCCTGCTCATCCCCACGAACACATTCGTGATCCAA GCCAAGAAAGCATTTAATATCAAGGGGCTGACGCATTTGACGAAGGCAAT GGTCCTGCTGACTGCCATTTCTGGAGCCTTTGTAGCCGGACTAGACGCCG GACTCGTGTACAACTCGTTCCCGAAGATGGGCGACAAGTGGATTCCCGAT GACATGTGGACGTTTGCGCCCATACAGAAGAACATCACCGAGAATCCGAC GACGGTGCAGTTCAATCACCGCATCCTTGGTATTAGCACAGTAACGCTGA CCACCGCTCTGTGGCTGGTCACCAGAAGGATGCAGTTGCCCAAGCGCGCC AACTGGGCCATCAACGCCGTGGTGGCTATGGCCTGGACGCAGGCCACGCT TGGCGTAACCACCTTGCTTAACTACGTGCCCGTGCCTCTGGCAACGGCCC ACCAGTCGGGCTCGCTTATTCTGCTGAGTTTCGCATTGTGGCTGTCGCAC GAGGTTCGACTGTTGAAGTACCTTCCGAAGTAAATAAATAGGCGTTTATT TGTTGAACAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3803-RA | 1531 | CG3803-RA | 26..1337 | 3..1314 | 6545 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 19838587..19839464 | 1308..431 | 4285 | 99.2 | Minus |
chr2R | 21145070 | chr2R | 19839896..19840089 | 195..3 | 830 | 96.4 | Minus |
chr2R | 21145070 | chr2R | 19839523..19839657 | 430..296 | 675 | 100 | Minus |
chr2R | 21145070 | chr2R | 19839712..19839817 | 298..193 | 515 | 99.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 23952507..23953390 | 1314..431 | 4405 | 99.9 | Minus |
2R | 25286936 | 2R | 23953822..23954014 | 195..3 | 965 | 100 | Minus |
2R | 25286936 | 2R | 23953449..23953583 | 430..296 | 675 | 100 | Minus |
2R | 25286936 | 2R | 23953638..23953743 | 298..193 | 530 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 23953706..23954589 | 1314..431 | 4405 | 99.8 | Minus |
2R | 25260384 | 2R | 23955021..23955213 | 195..3 | 965 | 100 | Minus |
2R | 25260384 | 2R | 23954648..23954782 | 430..296 | 675 | 100 | Minus |
2R | 25260384 | 2R | 23954837..23954942 | 298..193 | 530 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 19838587..19839464 | 431..1308 | 99 | <- | Minus |
chr2R | 19839523..19839655 | 298..430 | 100 | <- | Minus |
chr2R | 19839713..19839815 | 195..297 | 99 | <- | Minus |
chr2R | 19839897..19840089 | 1..194 | 95 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3803-RA | 1..1182 | 102..1283 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3803-RA | 1..1182 | 102..1283 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3803-RA | 1..1182 | 102..1283 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3803-RA | 1..1182 | 102..1283 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3803-RA | 1..1182 | 102..1283 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3803-RA | 2..1303 | 3..1304 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3803-RA | 2..1303 | 3..1304 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3803-RA | 24..1331 | 1..1308 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3803-RA | 2..1303 | 3..1304 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3803-RA | 33..1340 | 1..1308 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23952513..23953390 | 431..1308 | 100 | <- | Minus |
2R | 23953449..23953581 | 298..430 | 100 | <- | Minus |
2R | 23953639..23953741 | 195..297 | 100 | <- | Minus |
2R | 23953823..23954014 | 1..194 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23952513..23953390 | 431..1308 | 100 | <- | Minus |
2R | 23953449..23953581 | 298..430 | 100 | <- | Minus |
2R | 23953639..23953741 | 195..297 | 100 | <- | Minus |
2R | 23953823..23954014 | 1..194 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23952513..23953390 | 431..1308 | 100 | <- | Minus |
2R | 23953449..23953581 | 298..430 | 100 | <- | Minus |
2R | 23953639..23953741 | 195..297 | 100 | <- | Minus |
2R | 23953823..23954014 | 1..194 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 19840036..19840913 | 431..1308 | 100 | <- | Minus |
arm_2R | 19840972..19841104 | 298..430 | 100 | <- | Minus |
arm_2R | 19841162..19841264 | 195..297 | 100 | <- | Minus |
arm_2R | 19841346..19841537 | 1..194 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23954856..23954958 | 195..297 | 100 | <- | Minus |
2R | 23955040..23955231 | 1..194 | 98 | Minus | |
2R | 23953730..23954607 | 431..1308 | 100 | <- | Minus |
2R | 23954666..23954798 | 298..430 | 100 | <- | Minus |
Translation from 101 to 1282
> RE54691.pep MLRLLQKRTNLIKLVVPGPRLHQTIAQTAIKEIPVIKPISTPKSDKTVGR WFLGVSGMVFVAVGLGGVTRLTESGLSMVTWKLTGERMPRTQEEWVQEFN LYQQYPEYKLKNVNMTVEEFKFIFMMEYMHRMWGRAIGGFFLLPAVYFWR KGYFCAKTKKSVLLLGTLIGLQGLMGWYMVKSGLEDRFQDPNDVPRVSQY RLASHLAAAFVLYSLSLSKAMSLLIPTNTFVIQAKKAFNIKGLTHLTKAM VLLTAISGAFVAGLDAGLVYNSFPKMGDKWIPDDMWTFAPIQKNITENPT TVQFNHRILGISTVTLTTALWLVTRRMQLPKRANWAINAVVAMAWTQATL GVTTLLNYVPVPLATAHQSGSLILLSFALWLSHEVRLLKYLPK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12050-PA | 393 | GF12050-PA | 1..393 | 1..393 | 1973 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19975-PA | 393 | GG19975-PA | 1..393 | 1..393 | 2046 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21698-PA | 400 | GH21698-PA | 1..400 | 1..393 | 1614 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3803-PA | 393 | CG3803-PA | 1..393 | 1..393 | 2038 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20711-PA | 397 | GI20711-PA | 1..397 | 1..393 | 1592 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10912-PA | 395 | GL10912-PA | 1..395 | 1..393 | 1821 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17696-PA | 395 | GA17696-PA | 1..395 | 1..393 | 1805 | 84.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15488-PA | 393 | GM15488-PA | 1..393 | 1..393 | 2037 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24990-PA | 392 | GD24990-PA | 1..392 | 1..393 | 2036 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20450-PA | 395 | GJ20450-PA | 1..395 | 1..393 | 1590 | 74.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15851-PA | 392 | GK15851-PA | 1..392 | 1..393 | 1674 | 78.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11508-PA | 393 | GE11508-PA | 1..393 | 1..393 | 2037 | 97.5 | Plus |
Translation from 101 to 1282
> RE54691.hyp MLRLLQKRTNLIKLVVPGPRLHQTIAQTAIKEIPVIKPISTPKSDKTVGR WFLGVSGMVFVAVGLGGVTRLTESGLSMVTWKLTGERMPRTQEEWVQEFN LYQQYPEYKLKNVNMTVEEFKFIFMMEYMHRMWGRAIGGFFLLPAVYFWR KGYFCAKTKKSVLLLGTLIGLQGLMGWYMVKSGLEDRFQDPNDVPRVSQY RLASHLAAAFVLYSLSLSKAMSLLIPTNTFVIQAKKAFNIKGLTHLTKAM VLLTAISGAFVAGLDAGLVYNSFPKMGDKWIPDDMWTFAPIQKNITENPT TVQFNHRILGISTVTLTTALWLVTRRMQLPKRANWAINAVVAMAWTQATL GVTTLLNYVPVPLATAHQSGSLILLSFALWLSHEVRLLKYLPK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3803-PA | 393 | CG3803-PA | 1..393 | 1..393 | 2038 | 100 | Plus |