BDGP Sequence Production Resources |
Search the DGRC for RE55033
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 550 |
Well: | 33 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG7718-RA |
Protein status: | RE55033.pep: gold |
Preliminary Size: | 1690 |
Sequenced Size: | 1947 |
Gene | Date | Evidence |
---|---|---|
CG7718 | 2001-12-14 | Blastp of sequenced clone |
CG7718 | 2002-01-01 | Sim4 clustering to Release 2 |
CG7718 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7718 | 2008-04-29 | Release 5.5 accounting |
CG7718 | 2008-08-15 | Release 5.9 accounting |
CG7718 | 2008-12-18 | 5.12 accounting |
1947 bp (1947 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071478
> RE55033.complete GATAATTCCCGATAGCTATAAATTGTTATCGAATCCCAGCTCGCTTTGCA ACACTTGCGTTCCACCTGGAATTTATTTACGTGCTGAAATTCGAAGTTTT TTTTGTGATAAAACAGCACTCCATGAATGAAAGTGTGTTCCGGATACAGC CAAACAGACAGTGAGCAATGCGCCATACCCTGTCATCAAATAGCAGCCGC CCAGAGTGAGGATCCGCTTGCCAATCCGTCAGAGAAATCCCCGCCAAGAT GATGCCATACCTTCGCCGCCTTTTCAGCCAGGAGCTCTCTCCGGCTGCTC AGGGCGATTTTCTGGGCTGCTTGCAGCAGGCGCCCAGTGTCCTGGCCACC GGATTCCCTGGAGCACCCGCACTGGAGAGCCTAAGTTGGTTACACAACCT AGCGCCGTGCTTCCCGCTGCGAGGCGATCAAATTCAGGTCATCCACGAGC CAAAGCACTTCTACGAAACGCTGGTGCAACGAATCGGTCAGGCCAAACGC CGTATAGTGCTGGCCAGTTTGTACCTGGGCACTGGGCAACTGGAGAACGC AATGGTTCAGACGTTGCGTCACAGCCTGGAGCAACAGTCTGCCCTGAGGC TCAACGTGCTGTTGGACTTTACACGCGGCACGCGGGGAACCCTCAACTCC AAGACCATGTTGCTACCCCTGGTCCGCGACTTTGCGAGCCAGGTGCAGCT ATCCCTGTACCATACGCCTGATCTGCGCGGGATGACAAAGCGACTAGCAC CGCCACGGTGGAATGAGCTTCTCGGACTACAGCACATGAAGGTCTACCTG TTCGACGATGCCGTGATCATATCAGGCGCCAATCTGTCCAATGACTACTT CACCAACCGGCAGGATCGATACATACTCATTGAGGACAAACCGTTGGCGG ATTTCTATGCGCAGTTCATCGAACGCGTTCAAGAGTTTAGTTTGGCAGTG GCGCCAGATGCCAGCGAGGGACTGCACCGCAACTGGCGAATACTGCCGTA CGAGGGCACCAAGGAGCAGTTTATCCAGCTTGCCCGTAAACGTATTTCCG ATTTAGTGCAGGAGACGTTTCAGCGGCAGGCGCGAACTAAAGAGCAGAAT CCGCAGGCAGACACATGGATTTTTCCGCTGCTTGAGATGGGCCAGATCGG CATTCATCACGACAGCGTGGTGACCAAGCGGCTGCTCTCCAACTGCTTGT CTGGATCACGGCTGAAACTGGCCACCGGGTACTTCAACCTGACGCAGGAG TACATGGACACGCTCACGCACAAGTGCCTGGCCCAATGCAGCATACTGAT GGCTCATCCAAATGCAAACGGCTTTCAGGGTGCCAAAGGACCAGCGGGCG GAATTCCGGCTGCCTACACACTGATAGCCAAGAGTTTCTACGAGAGCCTG GTCCGCCGGAAGCAAAACCACCGCGTTAACTTCTTCGAGTACGAAAAGCC CGGCTGGACGTACCATGCTAAAGGACTGTGGTACTACCTGCCAGAGGCAA TACTGCCAAACCTCACGCTGATCGGCTCTTCGAACTTTGGCGAGCGATCG GTGAACCGCGATCTGGAGACACAGGTGTGCCTTGTGACGGCTAATAAGGA TCTAAGCCAGCGGCTGCAGGCGGAAGCTGACCGGCTGTACGATCTGTCAC AGACGGCGGAGCGGGAAATCGTCCAACGACCCGTTCCGCGATGGGTCCAG GCCGTCGTTCGCATATTCAGGAATTTCTTCTAGGCTCTTCGATATAGTAG TTTAATTTTTTTCGTTCTTTGTTAAGCCCCATATCCCAGGTAGTTAATTT AGTTTTATAATTCGTGTTTAATCTTTGCCCTGGGCAAGTGTTTCTATTGC TGGTAATTGTTGATTTTGTACACACGCTAAAGTTTGTTAAATAATAAAGA GAATCGAGGGCATGCAGAAGGAAAAAAAAACAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7718-RA | 1955 | CG7718-RA | 31..1955 | 1..1925 | 9625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 14568166..14568784 | 1314..1931 | 99 | <- | Minus |
chr3R | 14568843..14570155 | 1..1313 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7718-RA | 1..1485 | 249..1733 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7718-RA | 1..1485 | 249..1733 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7718-RA | 1..1485 | 249..1733 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7718-RA | 1..1485 | 249..1733 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7718-RA | 1..1485 | 249..1733 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7718-RA | 1..1920 | 1..1920 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7718-RA | 1..1921 | 1..1921 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7718-RA | 1..1921 | 1..1921 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7718-RA | 1..1920 | 1..1920 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7718-RA | 1..1921 | 1..1921 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18744052..18744670 | 1314..1931 | 99 | <- | Minus |
3R | 18744729..18746041 | 1..1313 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18744052..18744670 | 1314..1931 | 99 | <- | Minus |
3R | 18744729..18746041 | 1..1313 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18744052..18744670 | 1314..1931 | 99 | <- | Minus |
3R | 18744729..18746041 | 1..1313 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 14569774..14570392 | 1314..1931 | 99 | <- | Minus |
arm_3R | 14570451..14571763 | 1..1313 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18484883..18485501 | 1314..1931 | 99 | <- | Minus |
3R | 18485560..18486872 | 1..1313 | 100 | Minus |
Translation from 248 to 1732
> RE55033.pep MMPYLRRLFSQELSPAAQGDFLGCLQQAPSVLATGFPGAPALESLSWLHN LAPCFPLRGDQIQVIHEPKHFYETLVQRIGQAKRRIVLASLYLGTGQLEN AMVQTLRHSLEQQSALRLNVLLDFTRGTRGTLNSKTMLLPLVRDFASQVQ LSLYHTPDLRGMTKRLAPPRWNELLGLQHMKVYLFDDAVIISGANLSNDY FTNRQDRYILIEDKPLADFYAQFIERVQEFSLAVAPDASEGLHRNWRILP YEGTKEQFIQLARKRISDLVQETFQRQARTKEQNPQADTWIFPLLEMGQI GIHHDSVVTKRLLSNCLSGSRLKLATGYFNLTQEYMDTLTHKCLAQCSIL MAHPNANGFQGAKGPAGGIPAAYTLIAKSFYESLVRRKQNHRVNFFEYEK PGWTYHAKGLWYYLPEAILPNLTLIGSSNFGERSVNRDLETQVCLVTANK DLSQRLQAEADRLYDLSQTAEREIVQRPVPRWVQAVVRIFRNFF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17865-PA | 493 | GF17865-PA | 1..493 | 2..494 | 2487 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16338-PA | 493 | GG16338-PA | 1..493 | 2..494 | 2609 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19406-PA | 495 | GH19406-PA | 1..495 | 2..494 | 2327 | 86.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7718-PA | 494 | CG7718-PA | 1..494 | 1..494 | 2574 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22216-PA | 494 | GI22216-PA | 1..494 | 2..494 | 2313 | 85 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23108-PA | 493 | GL23108-PA | 1..493 | 2..494 | 2379 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20541-PA | 493 | GA20541-PA | 1..493 | 2..494 | 2378 | 88.2 | Plus |
Dpse\GA22428-PA | 411 | GA22428-PA | 1..410 | 2..411 | 1974 | 87.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18684-PA | 494 | GM18684-PA | 1..494 | 1..494 | 2617 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20153-PA | 494 | GD20153-PA | 1..494 | 1..494 | 2640 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24337-PA | 494 | GJ24337-PA | 1..494 | 2..494 | 2341 | 86.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22604-PA | 495 | GK22604-PA | 1..495 | 1..494 | 2337 | 86.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25174-PA | 494 | GE25174-PA | 1..494 | 1..494 | 2579 | 97.2 | Plus |
Translation from 248 to 1732
> RE55033.hyp MMPYLRRLFSQELSPAAQGDFLGCLQQAPSVLATGFPGAPALESLSWLHN LAPCFPLRGDQIQVIHEPKHFYETLVQRIGQAKRRIVLASLYLGTGQLEN AMVQTLRHSLEQQSALRLNVLLDFTRGTRGTLNSKTMLLPLVRDFASQVQ LSLYHTPDLRGMTKRLAPPRWNELLGLQHMKVYLFDDAVIISGANLSNDY FTNRQDRYILIEDKPLADFYAQFIERVQEFSLAVAPDASEGLHRNWRILP YEGTKEQFIQLARKRISDLVQETFQRQARTKEQNPQADTWIFPLLEMGQI GIHHDSVVTKRLLSNCLSGSRLKLATGYFNLTQEYMDTLTHKCLAQCSIL MAHPNANGFQGAKGPAGGIPAAYTLIAKSFYESLVRRKQNHRVNFFEYEK PGWTYHAKGLWYYLPEAILPNLTLIGSSNFGERSVNRDLETQVCLVTANK DLSQRLQAEADRLYDLSQTAEREIVQRPVPRWVQAVVRIFRNFF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7718-PA | 494 | CG7718-PA | 1..494 | 1..494 | 2574 | 100 | Plus |