Clone RE55360 Report

Search the DGRC for RE55360

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:553
Well:60
Vector:pFlc-1
Associated Gene/TranscriptNrk-RA
Protein status:RE55360.pep: gold
Sequenced Size:3238

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Nrk 2008-04-29 Picked prior to 5.5
Nrk 2008-08-15 Release 5.9 accounting
Nrk 2008-12-18 5.12 accounting

Clone Sequence Records

RE55360.complete Sequence

3238 bp assembled on 2008-05-29

GenBank Submission: BT033065

> RE55360.complete
GTATTCGGTGAAAAGGCGTCGTCGAGCTGTGTGCGCGGAAATAAACAAAT
ATTCTGCCGACTTACTTCGAGCTTACTTCTTAAAATCTATTTTAAAATTC
GGGTAGATTGAATATTGTGGTGTAAGGCGGTAAAATGCCTTAGTTTATGA
GTGCTCGCAAGGATTTTGCTTGGAAACGGTTCGCTAAACAAGGCATATAC
ATAAAACACAGCCATGGCTGCCGGGCAATGGGTGGGGGTGGTTGAGCGGG
TGCTCCGGGGAATGGTGCTGAAATGGGGGGCCAATTTGGCTGTCCTGGGG
CTGTGCGTGTTTCTCTTTGCCAGCGCCACGCACGCGAACTCCCTGAACGC
CATCGAGGAGCCCGTCACCCGGCGACACCACCAGCGGCATCACGAGCGCG
AGCGGGAGGAGAACGGCTACTGCGCCCCGTACAGCGGCAAGGTGTGCAAG
GAATACCTCACCGGCCAGGTGTGGTACAGTCTGGAGGATCCCACTGGCGG
GTGGAAGAACGAGCAGGTGACCACGGCGCTCTGGGACGAGCTTATCTCCG
ATCTTACGGGTCTGTGTCGCGAAGCAGCCGAGAAAATGCTCTGCGCCTAT
GCGTTTCCCAACTGCCACATGGAGGGCGGTCGAGCGGTGAAGGCTCCTCT
CTGCTTCGAGGATTGCCAGGCCACGCATCTCCAGTTCTGCTACAACGACT
GGGTGCTCATCGAGGAGAAGAAGGAGCGAAATATGTTCATCAAGAGCCGC
GGCCACTTCCGGCTACCCAACTGCTCCTCCTTGCCGCACTACAACGCTTC
CATGCGGCGACCCAACTGCTCCTACATCGGTCTCACCGAACTCAAGGAGT
CCGAAGTGAGCTACGATTGCCGCAATGGAAACGGACGCTTCTACATGGGC
ACAATGAACGTGTCCAAGTCGGGCATTCCCTGCCAGCGCTGGGACACTCA
GTACCCGCACAAGCACTTCCAGCCACCACTGGTCTTCCATCAGCTCCTGG
AGGGCGAAAACTACTGCCGGAATGCTGGCGGTGAGGAGCCGCATCCCTGG
TGCTACACTGTGGATGAATCAGTGCGCTGGCAGCACTGCGATATACCCAT
GTGTCCGGATTATGTGGACCCCAATGCTGTCGATTTGAACACGCCCATCA
AGATGGAGAAGTTCTTCACGCCATCGATGATCTTTCTCTTGGCTGGAATA
GGTTTCGTGGCCATTGTGACCCTGCACTTGATGATATTGCTAGTCTATAA
GTTGTCCAAGCACAAGGATTACTCTCAGCCCGCGGGAGCAGCCACTGCCG
AATGCAGTGTTTCCATGCGTGGAGGAGGAGATTGTGGCGGCAATCTGAAC
ACCAGTAGAGAAACCCTCGGAGGCAATGGAAACACGAACACCTTGGCAAA
ATGGGGCACCATCAGGAGCACGGCCACAATACACAGCAATTGCGTGGCCC
TTACTACGGTGACCAATGTGTCTGATGCGAAGGGCACGAAACCGAATGCA
CGCCTGGAGAAGTTGGAGTACCCACGCGGGGATATAGTGTATGTGAGATC
ATTGGGTCAAGGAGCCTTCGGTCGCGTCTTCCAGGCCAGGGCTCCTGGAC
TTGTTCCCGATCAGGAAGATCTACTAGTCGCTGTTAAGATGCTAAAGGAC
GACGCCAGCGACCAGATGCAGATGGATTTCGAGCGCGAGGCCTGTTTGCT
GGCCGAGTTCGATCATCCCAATATCGTGAGGCTGCTGGGGGTGTGCGCCT
TGGGCAGACCCATGTGCCTGCTCTTCGAGTACATGGCTCCTGGCGATCTA
AGCGAGTTCTTGCGCGCCTGCTCCCCATATGCCACACACCAGGCGCCGAC
ACAGGATCGTCTGCAGTTGAACGAGCTACATCTGCTGCAGATGGCGGCCA
ACATTGCAGCGGGCATGCTGTATCTTTCGGAGAGAAAATTCGTCCACCGG
GATTTGGCCACCAGGAATTGCCTGATCAACGAGCACATGGCGGTAAAGAT
CGCCGACTTTGGGCTCTCGCACAAGATCTATTTGCAGGACTATTACAAAG
GCGATGAGAACGACTTCATCCCGATCCGCTGGATGCCACTTGAGAGCATA
CTGTACAACAAGTTCTCGCTTGAGTCGGATGTGTGGGCATACGGCATCTG
TCTGTGGGAGGTCTTCTCCTTCGCCTTGCAGCCCTACTTTGGGTTAACCC
ACGAGGAGGTGATCAAATACATCAAGGAGGGCAACGTACTCGGCTGTCCG
GACAACACGCCGCTCTCCGTCTACGCGCTGATGCGTCGCTGCTGGAACCG
CAAGCCCAGTGAGCGACCTGGCTTCGCCGAGATCAACCACTGCATCCAGC
ACAGCATCGCCGAGAGCGAGTGCAAGGCAATGCTCTAGGGGATTGCCGGA
GAAGTGAATGAAATAATCCTTGTCGAACAGAACGATCGTCCGTTGTCCTT
GGGGGCAAGCAATAGAAGCGCATGAATACGCCAGGTTGGGTGGAAAAACA
ATAGAAGGGAATGCCATCATCTTAACACTTGATAATAAGCTTTTGGATCT
TTAGTTGTGTATCTCAGCATTGCCGCTTTTGGTTTAGGTCATATAAAATA
GTTCTGAATTGCATAAAGGTGGCATTCCTTGAATATCTTTTTTGAGTCTC
CCCAGCTCTTATGCATATTGAATTCAATTTTGCACAAGGTGAGATCAGAG
GGGCATCTGGTTTGTGATTAAGTTAGTATAAATGACAACTCCATATCTTT
AAGAGATAGCTCCGTTACCAAGTCTTTCATTCGATGCTTCCTCACATAAC
TTTCTTTAATCGATACAGAAACTATTTTGATACACTTATACCCTCTGATC
TCTCGATCTCGATCGAATAGTCTGCCACAACGAACGCATCATCAACGTCT
CGTATCCATATCTAGTCTGTAGATTAAGTTTATATATATATGCGCATATG
TAGATTGCATTTTAATGGGAATATTTTTGACTAGGCTTAAGCACTGCCAT
CGCAGTCGCACTCCACAAAGATCGCTGATCACTGATCGCTGATCACTGGG
TGGACAAACAGGAACCAGACACCGGAGACCATCAAAACAATAAGTTAAAT
GAGATATGGAATATTTAGAGAACTGTCTACAGCCCGAATTTCTGGGTAAC
TTTACATAATCTTTGTAACTAAAGCAACGTGTTGATTGTAATTTGTATAA
ATAAACCATCTATAACCGTATCAAAAAAAAAAAAAAAA

RE55360.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:01:41
Subject Length Description Subject Range Query Range Score Percent Strand
Nrk-RA 3359 Nrk-RA 138..3359 1..3222 16080 99.9 Plus
CG15870-RA 481 CG15870-RA 359..481 3223..3101 615 100 Minus
CG34439-RB 781 CG34439-RB 667..781 1..115 575 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:14:13
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 9048703..9050817 1106..3222 10385 99.5 Plus
chr2R 21145070 chr2R 9047411..9047992 1..582 2895 99.8 Plus
chr2R 21145070 chr2R 9048053..9048334 581..862 1395 99.6 Plus
chr2R 21145070 chr2R 9048401..9048643 863..1105 1215 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:03:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:14:11
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13161368..13163485 1106..3223 10560 99.9 Plus
2R 25286936 2R 13160076..13160657 1..582 2910 100 Plus
2R 25286936 2R 13160718..13160999 581..862 1410 100 Plus
2R 25286936 2R 13161066..13161308 863..1105 1215 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:20:17
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 13162567..13164684 1106..3223 10560 99.9 Plus
2R 25260384 2R 13161275..13161856 1..582 2910 100 Plus
2R 25260384 2R 13161917..13162198 581..862 1410 100 Plus
2R 25260384 2R 13162265..13162507 863..1105 1215 100 Plus
Blast to na_te.dros performed on 2019-03-17 00:14:11 has no hits.

RE55360.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:15:11 Download gff for RE55360.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 9047411..9047992 1..582 99 -> Plus
chr2R 9048055..9048334 583..862 99 -> Plus
chr2R 9048401..9048643 863..1105 100 -> Plus
chr2R 9048703..9050817 1106..3222 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:24:02 Download gff for RE55360.complete
Subject Subject Range Query Range Percent Splice Strand
Nrk-RA 1..2175 214..2388 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:02:09 Download gff for RE55360.complete
Subject Subject Range Query Range Percent Splice Strand
Nrk-RA 1..2175 214..2388 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:32:45 Download gff for RE55360.complete
Subject Subject Range Query Range Percent Splice Strand
Nrk-RA 1..2175 214..2388 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:51:15 Download gff for RE55360.complete
Subject Subject Range Query Range Percent Splice Strand
Nrk-RA 1..2175 214..2388 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:15:01 Download gff for RE55360.complete
Subject Subject Range Query Range Percent Splice Strand
Nrk-RA 1..2175 214..2388 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:20:48 Download gff for RE55360.complete
Subject Subject Range Query Range Percent Splice Strand
Nrk-RA 339..2905 1..2567 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:02:09 Download gff for RE55360.complete
Subject Subject Range Query Range Percent Splice Strand
Nrk-RA 28..3249 1..3222 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:32:45 Download gff for RE55360.complete
Subject Subject Range Query Range Percent Splice Strand
Nrk-RA 14..3235 1..3222 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:51:15 Download gff for RE55360.complete
Subject Subject Range Query Range Percent Splice Strand
Nrk-RA 339..2905 1..2567 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:15:01 Download gff for RE55360.complete
Subject Subject Range Query Range Percent Splice Strand
Nrk-RA 14..3235 1..3222 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:15:11 Download gff for RE55360.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13161066..13161308 863..1105 100 -> Plus
2R 13160076..13160657 1..582 100 -> Plus
2R 13160720..13160999 583..862 100 -> Plus
2R 13161368..13163484 1106..3222 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:15:11 Download gff for RE55360.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13161066..13161308 863..1105 100 -> Plus
2R 13160076..13160657 1..582 100 -> Plus
2R 13160720..13160999 583..862 100 -> Plus
2R 13161368..13163484 1106..3222 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:15:11 Download gff for RE55360.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13161066..13161308 863..1105 100 -> Plus
2R 13160076..13160657 1..582 100 -> Plus
2R 13160720..13160999 583..862 100 -> Plus
2R 13161368..13163484 1106..3222 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:32:45 Download gff for RE55360.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9048571..9048813 863..1105 100 -> Plus
arm_2R 9048873..9050989 1106..3222 99   Plus
arm_2R 9047581..9048162 1..582 100 -> Plus
arm_2R 9048225..9048504 583..862 100 -> Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:29:49 Download gff for RE55360.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13161275..13161856 1..582 100 -> Plus
2R 13161919..13162198 583..862 100 -> Plus
2R 13162265..13162507 863..1105 100 -> Plus
2R 13162567..13164683 1106..3222 99   Plus

RE55360.pep Sequence

Translation from 213 to 2387

> RE55360.pep
MAAGQWVGVVERVLRGMVLKWGANLAVLGLCVFLFASATHANSLNAIEEP
VTRRHHQRHHEREREENGYCAPYSGKVCKEYLTGQVWYSLEDPTGGWKNE
QVTTALWDELISDLTGLCREAAEKMLCAYAFPNCHMEGGRAVKAPLCFED
CQATHLQFCYNDWVLIEEKKERNMFIKSRGHFRLPNCSSLPHYNASMRRP
NCSYIGLTELKESEVSYDCRNGNGRFYMGTMNVSKSGIPCQRWDTQYPHK
HFQPPLVFHQLLEGENYCRNAGGEEPHPWCYTVDESVRWQHCDIPMCPDY
VDPNAVDLNTPIKMEKFFTPSMIFLLAGIGFVAIVTLHLMILLVYKLSKH
KDYSQPAGAATAECSVSMRGGGDCGGNLNTSRETLGGNGNTNTLAKWGTI
RSTATIHSNCVALTTVTNVSDAKGTKPNARLEKLEYPRGDIVYVRSLGQG
AFGRVFQARAPGLVPDQEDLLVAVKMLKDDASDQMQMDFEREACLLAEFD
HPNIVRLLGVCALGRPMCLLFEYMAPGDLSEFLRACSPYATHQAPTQDRL
QLNELHLLQMAANIAAGMLYLSERKFVHRDLATRNCLINEHMAVKIADFG
LSHKIYLQDYYKGDENDFIPIRWMPLESILYNKFSLESDVWAYGICLWEV
FSFALQPYFGLTHEEVIKYIKEGNVLGCPDNTPLSVYALMRRCWNRKPSE
RPGFAEINHCIQHSIAESECKAML*

RE55360.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 17:37:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12938-PA 727 GF12938-PA 1..727 1..724 3517 90.3 Plus
Dana\GF15756-PA 634 GF15756-PA 356..633 390..668 567 41 Plus
Dana\GF17811-PA 1880 GF17811-PA 1093..1388 435..717 552 37.2 Plus
Dana\GF13459-PA 1708 GF13459-PA 1185..1451 438..707 549 39.9 Plus
Dana\GF10512-PA 1708 GF10512-PA 440..701 438..718 536 38.8 Plus
Dana\GF15756-PA 634 GF15756-PA 209..317 180..301 158 33.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:37:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20358-PA 726 GG20358-PA 1..726 1..724 3866 97.8 Plus
Dere\GG10097-PA 685 GG10097-PA 206..668 180..709 792 35.4 Plus
Dere\GG14440-PA 2086 GG14440-PA 1308..1589 435..707 591 39.4 Plus
Dere\GG22256-PA 1701 GG22256-PA 1190..1453 438..704 550 40.4 Plus
Dere\GG15861-PA 1619 GG15861-PA 368..629 438..718 538 38.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 17:37:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20314-PA 681 GH20314-PA 1..681 47..724 3094 82.7 Plus
Dgri\GH13860-PA 1129 GH13860-PA 649..1111 180..709 827 36.2 Plus
Dgri\GH18121-PA 1884 GH18121-PA 1072..1341 435..713 614 41.3 Plus
Dgri\GH22710-PA 1769 GH22710-PA 1227..1493 438..707 547 39.6 Plus
Dgri\GH16452-PA 1676 GH16452-PA 369..630 438..718 537 38.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:45:38
Subject Length Description Subject Range Query Range Score Percent Strand
Nrk-PA 724 CG4007-PA 1..724 1..724 3942 100 Plus
Ror-PA 685 CG4926-PA 179..668 146..709 812 34.7 Plus
InR-PD 2144 CG18402-PD 1365..1660 435..721 569 38.5 Plus
InR-PC 2144 CG18402-PC 1365..1660 435..721 569 38.5 Plus
InR-PB 2144 CG18402-PB 1365..1660 435..721 569 38.5 Plus
InR-PA 2144 CG18402-PA 1365..1660 435..721 569 38.5 Plus
Alk-PB 1701 CG8250-PB 1190..1453 438..704 534 40.4 Plus
Alk-PA 1701 CG8250-PA 1190..1453 438..704 534 40.4 Plus
Abl-PH 1504 CG4032-PH 362..629 432..718 510 38 Plus
Abl-PG 1522 CG4032-PG 380..647 432..718 510 38 Plus
Abl-PE 1589 CG4032-PE 362..629 432..718 510 38 Plus
Abl-PD 1607 CG4032-PD 380..647 432..718 510 38 Plus
Abl-PJ 1620 CG4032-PJ 362..629 432..718 510 38 Plus
Abl-PA 1620 CG4032-PA 362..629 432..718 510 38 Plus
Abl-PB 1638 CG4032-PB 380..647 432..718 510 38 Plus
Abl-PI 1666 CG4032-PI 380..647 432..718 510 38 Plus
Abl-PC 1705 CG4032-PC 362..629 432..718 510 38 Plus
Abl-PF 1723 CG4032-PF 380..647 432..718 510 38 Plus
btl-PB 1052 CG32134-PB 678..992 415..707 491 35.9 Plus
btl-PA 1052 CG32134-PA 678..992 415..707 491 35.9 Plus
Eph-PF 1005 CG1511-PF 714..962 447..707 480 39.1 Plus
Eph-PB 1047 CG1511-PB 698..946 447..707 480 39.1 Plus
Eph-PE 1080 CG1511-PE 731..979 447..707 480 39.1 Plus
Eph-PD 1080 CG1511-PD 747..995 447..707 480 39.1 Plus
Eph-PA 1080 CG1511-PA 731..979 447..707 480 39.1 Plus
Eph-PC 1096 CG1511-PC 747..995 447..707 480 39.1 Plus
sev-PA 2554 CG18085-PA 2212..2474 444..704 476 38.8 Plus
htl-PC 729 CG7223-PC 410..684 435..707 470 36.9 Plus
htl-PA 729 CG7223-PA 410..684 435..707 470 36.9 Plus
htl-PB 729 CG7223-PB 410..684 435..707 470 36.9 Plus
Ddr-PG 1054 CG33531-PG 738..1039 418..712 468 35.7 Plus
Ddr-PF 1054 CG33531-PF 738..1039 418..712 468 35.7 Plus
Btk29A-PH 464 CG8049-PH 195..448 432..704 460 35.9 Plus
Btk29A-PG 565 CG8049-PG 296..549 432..704 460 35.9 Plus
Btk29A-PF 603 CG8049-PF 334..587 432..704 460 35.9 Plus
Btk29A-PA 603 CG8049-PA 334..587 432..704 460 35.9 Plus
Btk29A-PC 603 CG8049-PC 334..587 432..704 460 35.9 Plus
Btk29A-PE 786 CG8049-PE 517..770 432..704 460 35.9 Plus
Btk29A-PD 786 CG8049-PD 517..770 432..704 460 35.9 Plus
Btk29A-PB 786 CG8049-PB 517..770 432..704 460 35.9 Plus
Src64B-PD 552 CG7524-PD 275..544 432..719 453 35.9 Plus
Src64B-PC 552 CG7524-PC 275..544 432..719 453 35.9 Plus
Src64B-PI 552 CG7524-PI 275..544 432..719 453 35.9 Plus
Src64B-PH 552 CG7524-PH 275..544 432..719 453 35.9 Plus
Src64B-PF 552 CG7524-PF 275..544 432..719 453 35.9 Plus
Src64B-PJ 552 CG7524-PJ 275..544 432..719 453 35.9 Plus
Src64B-PB 552 CG7524-PB 275..544 432..719 453 35.9 Plus
Src64B-PE 552 CG7524-PE 275..544 432..719 453 35.9 Plus
Src64B-PK 553 CG7524-PK 276..545 432..719 453 35.9 Plus
FER-PD 393 CG8874-PD 107..382 416..711 440 34.8 Plus
FER-PC 475 CG8874-PC 189..464 416..711 440 34.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 17:37:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19986-PA 673 GI19986-PA 1..673 47..724 3090 82.1 Plus
Dmoj\GI19175-PA 499 GI19175-PA 243..479 465..709 641 47.8 Plus
Dmoj\GI23836-PA 1852 GI23836-PA 1038..1312 435..713 596 40.6 Plus
Dmoj\GI18496-PA 1771 GI18496-PA 1214..1480 438..707 549 39.9 Plus
Dmoj\GI16710-PA 1591 GI16710-PA 367..628 438..718 537 39.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 17:37:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11237-PA 739 GL11237-PA 36..739 28..724 3282 86.4 Plus
Dper\GL19173-PA 685 GL19173-PA 357..671 390..709 702 42.6 Plus
Dper\GL21513-PA 1937 GL21513-PA 1115..1411 435..723 597 39.3 Plus
Dper\GL11825-PA 1740 GL11825-PA 1194..1460 438..707 552 39.9 Plus
Dper\GL18177-PA 1097 GL18177-PA 748..996 447..707 505 39.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 17:37:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17849-PA 739 GA17849-PA 36..739 28..724 3278 86.3 Plus
Dpse\GA26307-PB 2244 GA26307-PB 1436..1732 435..723 594 39.3 Plus
Dpse\GA20930-PA 1705 GA20930-PA 1194..1460 438..707 551 39.9 Plus
Dpse\GA17894-PA 1713 GA17894-PA 376..637 438..718 536 38.8 Plus
Dpse\GA20192-PA 720 GA20192-PA 393..666 435..707 489 37 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:37:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21445-PA 724 GM21445-PA 1..724 1..724 3883 98.5 Plus
Dsec\GM18059-PA 685 GM18059-PA 206..668 180..709 798 35.7 Plus
Dsec\GM11002-PA 2097 GM11002-PA 1318..1599 435..707 587 39.4 Plus
Dsec\GM24379-PA 1617 GM24379-PA 368..629 438..718 536 38.8 Plus
Dsec\GM20046-PA 646 GM20046-PA 169..398 472..704 509 41.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:37:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10943-PA 489 GD10943-PA 3..489 218..724 2583 94.5 Plus
Dsim\GD23669-PA 685 GD23669-PA 206..668 180..709 798 36 Plus
Dsim\GD19971-PA 1814 GD19971-PA 1341..1622 435..707 586 39.4 Plus
Dsim\GD20204-PA 727 GD20204-PA 410..682 435..707 478 37.1 Plus
Dsim\Src64B-PA 552 GD13245-PA 275..545 432..720 461 35.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 17:37:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21235-PA 697 GJ21235-PA 1..697 32..724 3135 82.3 Plus
Dvir\GJ18109-PA 653 GJ18109-PA 183..636 187..709 804 35.2 Plus
Dvir\GJ23294-PA 1966 GJ23294-PA 1151..1415 435..707 624 42.4 Plus
Dvir\GJ21359-PA 1718 GJ21359-PA 1146..1404 446..707 544 40.4 Plus
Dvir\GJ12453-PA 1688 GJ12453-PA 387..648 438..718 539 38.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 17:37:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21680-PA 774 GK21680-PA 89..774 38..724 3022 82.9 Plus
Dwil\GK23115-PA 697 GK23115-PA 36..674 64..708 798 30.4 Plus
Dwil\GK12078-PA 1984 GK12078-PA 1186..1465 435..707 572 39.4 Plus
Dwil\GK10731-PA 1722 GK10731-PA 1196..1462 438..707 545 39.4 Plus
Dwil\GK11836-PA 735 GK11836-PA 408..684 435..707 497 37 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:37:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12517-PA 724 GE12517-PA 1..724 1..724 3872 98.1 Plus
Dyak\GE18911-PA 685 GE18911-PA 390..668 421..709 702 44.6 Plus
Dyak\GE24970-PA 2094 GE24970-PA 1313..1594 435..707 590 39.4 Plus
Dyak\GE14049-PA 1697 GE14049-PA 1186..1449 438..704 549 40.4 Plus
Dyak\GE22200-PA 1616 GE22200-PA 367..628 438..718 538 38.8 Plus
Dyak\GE18911-PA 685 GE18911-PA 206..314 180..301 159 33.9 Plus

RE55360.hyp Sequence

Translation from 213 to 2387

> RE55360.hyp
MAAGQWVGVVERVLRGMVLKWGANLAVLGLCVFLFASATHANSLNAIEEP
VTRRHHQRHHEREREENGYCAPYSGKVCKEYLTGQVWYSLEDPTGGWKNE
QVTTALWDELISDLTGLCREAAEKMLCAYAFPNCHMEGGRAVKAPLCFED
CQATHLQFCYNDWVLIEEKKERNMFIKSRGHFRLPNCSSLPHYNASMRRP
NCSYIGLTELKESEVSYDCRNGNGRFYMGTMNVSKSGIPCQRWDTQYPHK
HFQPPLVFHQLLEGENYCRNAGGEEPHPWCYTVDESVRWQHCDIPMCPDY
VDPNAVDLNTPIKMEKFFTPSMIFLLAGIGFVAIVTLHLMILLVYKLSKH
KDYSQPAGAATAECSVSMRGGGDCGGNLNTSRETLGGNGNTNTLAKWGTI
RSTATIHSNCVALTTVTNVSDAKGTKPNARLEKLEYPRGDIVYVRSLGQG
AFGRVFQARAPGLVPDQEDLLVAVKMLKDDASDQMQMDFEREACLLAEFD
HPNIVRLLGVCALGRPMCLLFEYMAPGDLSEFLRACSPYATHQAPTQDRL
QLNELHLLQMAANIAAGMLYLSERKFVHRDLATRNCLINEHMAVKIADFG
LSHKIYLQDYYKGDENDFIPIRWMPLESILYNKFSLESDVWAYGICLWEV
FSFALQPYFGLTHEEVIKYIKEGNVLGCPDNTPLSVYALMRRCWNRKPSE
RPGFAEINHCIQHSIAESECKAML*

RE55360.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:18:43
Subject Length Description Subject Range Query Range Score Percent Strand
Nrk-PA 724 CG4007-PA 1..724 1..724 3942 100 Plus
Ror-PA 685 CG4926-PA 179..668 146..709 812 34.7 Plus
InR-PD 2144 CG18402-PD 1365..1660 435..721 569 38.5 Plus
InR-PC 2144 CG18402-PC 1365..1660 435..721 569 38.5 Plus
InR-PB 2144 CG18402-PB 1365..1660 435..721 569 38.5 Plus