Clone RE55648 Report

Search the DGRC for RE55648

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:556
Well:48
Vector:pFlc-1
Associated Gene/Transcriptbabo-RC
Protein status:RE55648.pep: gold
Preliminary Size:3612
Sequenced Size:4772

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8224 2003-01-01 Sim4 clustering to Release 3
CG8224 2003-05-02 Blastp of sequenced clone
babo 2008-04-29 Release 5.5 accounting
babo 2008-08-15 Release 5.9 accounting
babo 2008-12-18 5.12 accounting

Clone Sequence Records

RE55648.complete Sequence

4772 bp (4772 high quality bases) assembled on 2003-05-02

GenBank Submission: BT009976

> RE55648.complete
GCTGTTTGCAAATCCACACACACCAGCGCGGTTTTTCGCTGCACAAAATT
GTACATTTAAGAAAAAATAGCAGCAATTAATATAAACAAACGGTTGCCCC
AGACACCCGAAAGTGCCGGCTGTCCCGCGGAATATGAAATAGTGCCACTT
CCCCCGCGCCACTGCCCCAATCACGTGATGAAAATCCGCCTGAAAAGTCG
CCCTCGTCCGTGAAATGTAAAGCAGAGCAGAGCAGTTTTTCCAACCAACT
TGTGCGGAGTGTGGAGTTCGAGTTTCGCATTGCGGGCCCCCATCGAGATT
CGCTAATTGTGAGAATCGCCAGTCTATATTCCCGGCCATGCCCCCGCCAA
ATGTGGGAATTCGCGGGCGCCTGTCCTACGCGATAAATGCGCAGTTCGGG
GCCAATTAGTGGCTGTCTGAGGTGTCCTCCTGCCGCTCCTCCTGCTCCTG
CGGCCCCGCCTCGTCCTGCCGCGAAACAACAATCTCATTTGCAGGCCACA
GACTTTGAACTTGCGACGCGCGTGTGCGTGCGTGCGATCGTGGAAAACAA
AAGAAAAGCTCTCGGGCTGCACAAACAATAACAATAGCTCGGGTCGGGTC
GCACACACTATCGTCGGTGCGAATAGCCAACATGTTATCTGCGCTCCGGC
TAATCTTCCTGGGCGCTCTGCTCGGCGCCTCTGTTTGCGCCTCCCCCATT
GAGTTCGTAATGGACACCAGCCTAAATGGCTCTCGATCTGATCCTGCGAC
TGCAACCCACCCTGGCAAATGGCCACCGACGACCAAAGCGCCGGCGCTCA
GGGCTCCAGCTGGAACAGCTGGACATGCTTATCAGTCGCCATCGTCGTCG
CTGGCCGCTGATAACAGAAGCCACGACAACAACAACGCTAGCGCCGTGTC
CATGCTGCTGCCGCAAGACGGCGACGCATCTGGAGCTGTGGCCCCTGCTG
TTACTCCCCAGCTGCCCATCTACATTGCTCAGCCTAGCGCGAAAAAGCCA
GAAAACAAGATAAAATGCCACTGTGACACGTGCAAGGAATCGAACAATAT
ATGTGAAACGGACGGCTTTTGTTTCACGTCCGTGGAGAAGAACTCTGATG
GGAGCATCATCTTCAGCTACAGATGCATAACAGACCAGTTGCCACCTGAA
GATCCTACCTCGTGCAAGTTAAATTCGGAAGCGGGCTCTTCTCAGTGCTG
CGCCGAAGATTTTTGCAATACGCGTGAGAATTACAGTGGTGTCCTACCAG
ATTATGTGCCACACCGACTGACCAGCTGGGAGTTTGTGGCTATCATCCTA
GGGGCCACCCTCTTCATTTGCTTCACGGGCACCAGTACGTGGTATTATTG
CCAGCGTCGCAAGCGAATGGCTAGCGGAAGGACGTTTGCCAAGGAGGATT
CGGCGTACGATCCTATTTTGAATGGTAATACAACCATACACGACATCATT
GAGATGACCACCTCTGGTTCGGGTTCGGCTGGTCTTCCGCTGCTGGTGCA
GCGTTCCATTGCCCGACAGGTGCAGCTGTGCCACGTTATCGGAAAGGGAC
GTTTCGGCGAGGTCTGGCGTGGACGCTGGCGAGGCGAAAACGTGGCGGTC
AAGATCTTCTCTAGTCGCGAGGAGTGTTCCTGGTTCCGTGAGGCGGAAAT
CTATCAGACTGTTATGCTCCGCCACGAGAACATTTTGGGATTCATAGCTG
CAGACAACAAGGACAATGGAACTTGGACACAGTTGTGGCTCGTAACAGAC
TACCATGAAAACGGATCGCTCTTTGACTACCTAACCACGCACCCAGTGGA
CACCAACACCATGCTGAACATGTCGCTGAGTATTGCCACTGGACTGGCGC
ATCTGCATATGGACATTGTGGGCACTCGCGGCAAGCCCGCCATCGCCCAT
CGTGATCTCAAATCCAAAAACATACTGGTCAAATCAAATCTAAGCTGTGC
TATTGGAGATTTGGGTCTGGCCGTGCGCCATGTGGAGAAGAATGACTCTG
TGGACATACCTTCCACTCATCGCGTGGGTACCAAGCGCTATATGGCGCCC
GAGGTGCTGGACGAGAGTATGAATGATCAGCATTTTGACTCGTACAAGCG
GGCGGATGTGTACGCCTTTGGACTGATTCTCTGGGAGATTGCGCGTCGCT
GCAACATGGGCATGATATACGATGAGTATCAATTGCCGTATTACGATGTC
GTGCAACCTGATCCCAGCATTGAGGAGATGAAGAAGGTGGTTTGCATCGA
GAAGTGCCGGCCAAACATTCCAAACCGCTGGCACGCCTCCGATGTGCTCC
ACAACATGGCCAAGGTGATGAAGGAGTGCTGGTATCCCAATCCTGTGGCC
CGATTGACAGCGCTTCGCATCAAAAAGACACTTGCTAGCATCAGTGTGGA
GGACAAGGTCAAGAACTGATTGTGGCTTCAGTTTGACGAGTAGCCCTCGT
GTCACGCCCCGTGGGATCGGGGGCAGACAAATAGTAGTAACCTGTAACCT
GGCCCCGCGTTACCTTAAATGTCCTGGCAGCGCTTGCGAAGCAGTTCCAG
AATCCAGAAACCCGTTAAGAAATTAAATACAAAGAAGTTGTAAATATTAT
GTGCTAACTCATCCTTAAAGTTTCCAATGCTTTGCTTTGTTTCCGTTCAG
AACGAGCTCGTTATAAGTTTTGTGTTACACCATCCTCAACTATTGTACAT
AACCTTCGTTGACATTTTCGCTGAGATTTGCTTGTTTCCGGGCGGAGTGA
TCAAGGCGGCGCGCCACAAAAAAACTGCCGCACTGCCATTAGAGCTACCA
ATTAGGGCCTAGTTATATACCAACAAAATAACACATTATATACAATATAT
ATATTTTTTATAAATCCTGTTCGCGAGCGAGAACGAACGCCAGCAAACGA
AACGATAAATACATAACGAAAACAAAACAGTAAGACTATGTCAAGACTGA
GCAGCAGTGGAAAGCAGTGAGAAAACAACAGATTTGAACCGCAGACAATT
TTTAGCCTGCAATGAAATATACAAAACCAGCCACAACAGATCATTAGCAA
GAAAAAGATAACTCTTTTAGGCACTAACCAACAGATAAAGTCGATAAACT
CAGGAAATCGTAACGTAAAAAATAAAATGAAAGGAATCAAACGATTTGGC
GCGCCGCCTGCTCACGAACAGCTTGCCATGCCCACGTCGCTATTGCTGCT
GCTGTGCCTCTAAAACTTAATGAACACCACCCCTCTCCCATAAGTAGGTA
TCCATATTGCTGGAAGCGCTTCTCTTTGTAATCCTATGCTTAAACTATTT
TAAAATGTCTACACCAAAACTCTCGACCCTGGCAACCTGCATCGTCACGC
ATATTTTTTATTTTTGTTATTTCATTTACCTTCATATTGCCTGTGAACAT
ATCCCTTTATAAATCCTGTTTCTTGTTGTTTTATAACCAAAGCTTGTTCT
TCCTATTTTATTGTAGCCATAAATAAGTAAACAAAACTATAACTTTACAT
GGTATATATAAATTTATATACATATATATATGAATTGTATACTATATTTG
CTTCTATTATAAATTGTATGGAACTAAATGTTTCGTGAACAAACCTAAAC
CATTAATTTAATCCTGTGCACAGAGTTTGGGTGCGCTAATTCCGGGTCAC
ACCATATGTTTAACATCATAAATCAACTAAATCTCACATCAAATGCCATA
AAGCTAAATGAGTCCATTATCAATGTATACATGTGAAAACACAGTCCATT
ACCAGAATGCAATAGTAGTTTCAATACAACCCATGTTTCCTTTGACCATC
AATACACGCCAGCTGAGAGATTAAAGTAAACATTAATTAACATTTTATTC
ATTTCGATGTAAGCTAAGAGTAAGAGAAAGATTGTAATTAGGGTTATGAT
TAAATAGTACCTTCATATTGTTATTTTTTCGGTCTGCGAAATTTACTTTC
CTATTTTAATTTAATTTAAGCTTTACTGAAGTTAATCACATCCTGTACGA
ACACAATCGATTTCTTTGGAAAACAAATCTAAACTAAATTTATAGCTCTA
TTCGCGTACGTATATTTAGGTTTTGAAACTATTCCTGTAATTGTAAAATC
TGTAAATAATCTGTGCATTCAGTGCATGCGAGTCAAACAAAAAATGAGAG
ACAAGTTTCGAAGGATAGCGGACTTGATATTTGTTTGACTGTTCCAAGCT
AAGTTTAAGCCGAAAGTTGTTCTTAAGACTAACCCCCAATACAACCTCCG
AAGTGGGGCACTTCCTAAAGCCCACGACCTTAGTCCCTGATCCAAACCAA
AAACAACTTAAAAAAAAAACTGAGTTTAAGATTCAATTTAAACCGAAGAA
CATAAAATCAACAAAAGACTTGAACATGCGCAAAAAACATATAAAAATTA
ATTTTAAAAATAAATCCTATTTTGCTGGCAAACCACACTTTTGGTTCGAA
ATTTACAAGAATTCAAGAACTAAAACGATGCACCTTGTGCGGTTTATGTT
AGGCTCAAGTAAGCGAAGTAAGTGTCTCAGCCATAAAGTTAGGGACGAAA
GCATTTGCAATGTGTATTATTCGTGAATGGATTGGATCATGAGAGATATA
TAGAATGTCAGAGAGTTGAAGAACGAAAGGAGGAATGATTTACTTGGGTG
TAATGTTAAAAACAAAAGCGTTGAAAGTGTAAACAGAGTCTAACTTTTAG
CTTTAAGCTGCGTTTTTAATGGCACTTTAAATAAAATTACAAAAATAAAA
TCAACCAAAAAAAAAAAAAAAA

RE55648.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:43:29
Subject Length Description Subject Range Query Range Score Percent Strand
babo-RC 4806 babo-RC 33..4792 2..4761 23785 99.9 Plus
babo-RA 4824 babo-RA 1297..4810 1248..4761 17555 99.9 Plus
babo-RB 4872 babo-RB 1361..4872 1249..4760 17545 99.9 Plus
babo-RA 4824 babo-RA 33..1159 2..1128 5620 99.9 Plus
babo-RB 4872 babo-RB 33..1156 2..1125 5620 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 12:36:07
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 4847850..4850370 2234..4756 12535 99.9 Plus
chr2R 21145070 chr2R 4839919..4840606 2..689 3410 99.7 Plus
chr2R 21145070 chr2R 4847265..4847792 1712..2239 2640 100 Plus
chr2R 21145070 chr2R 4840679..4840994 689..1004 1580 100 Plus
chr2R 21145070 chr2R 4846971..4847209 1474..1712 1180 99.6 Plus
chr2R 21145070 chr2R 4846679..4846910 1247..1478 1145 99.6 Plus
chr2R 21145070 chr2R 4844603..4844732 1121..1250 650 100 Plus
chr2R 21145070 chr2R 4842310..4842427 1005..1122 590 100 Plus
chr2L 23010047 chr2L 5219890..5220053 1755..1592 220 75.6 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:03:57 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 12:36:05
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8960274..8962801 2234..4761 12625 100 Plus
2R 25286936 2R 8952342..8953029 2..689 3440 100 Plus
2R 25286936 2R 8959689..8960216 1712..2239 2640 100 Plus
2R 25286936 2R 8953102..8953417 689..1004 1580 100 Plus
2R 25286936 2R 8959395..8959633 1474..1712 1180 99.6 Plus
2R 25286936 2R 8959103..8959334 1247..1478 1160 100 Plus
2R 25286936 2R 8957027..8957156 1121..1250 650 100 Plus
2R 25286936 2R 8954734..8954851 1005..1122 590 100 Plus
2L 23513712 2L 5220790..5220953 1755..1592 220 75.6 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:04:22
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 8961473..8964000 2234..4761 12625 99.9 Plus
2R 25260384 2R 8953541..8954228 2..689 3440 100 Plus
2R 25260384 2R 8960888..8961415 1712..2239 2640 100 Plus
2R 25260384 2R 8954301..8954616 689..1004 1580 100 Plus
2R 25260384 2R 8960594..8960832 1474..1712 1180 99.5 Plus
2R 25260384 2R 8960302..8960533 1247..1478 1160 100 Plus
2R 25260384 2R 8958226..8958355 1121..1250 650 100 Plus
2R 25260384 2R 8955933..8956050 1005..1122 590 100 Plus
2L 23513712 2L 5220790..5220953 1755..1592 220 75.6 Minus
Blast to na_te.dros performed on 2019-03-16 12:36:05 has no hits.

RE55648.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 12:37:02 Download gff for RE55648.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 4839918..4840606 1..689 99 -> Plus
chr2R 4840680..4840994 690..1004 100 -> Plus
chr2R 4842310..4842427 1005..1122 100 -> Plus
chr2R 4844605..4844732 1123..1250 100 -> Plus
chr2R 4846683..4846910 1251..1478 99 -> Plus
chr2R 4846976..4847209 1479..1712 100 -> Plus
chr2R 4847266..4847789 1713..2236 100 -> Plus
chr2R 4847853..4850370 2237..4756 95   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:06:24 Download gff for RE55648.complete
Subject Subject Range Query Range Percent Splice Strand
babo-RA 1..491 632..1122 100 == Plus
babo-RA 635..1806 1248..2419 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:37:03 Download gff for RE55648.complete
Subject Subject Range Query Range Percent Splice Strand
babo-RC 1..1788 632..2419 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 13:33:41 Download gff for RE55648.complete
Subject Subject Range Query Range Percent Splice Strand
babo-RC 1..1788 632..2419 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:13:04 Download gff for RE55648.complete
Subject Subject Range Query Range Percent Splice Strand
babo-RA 1..491 632..1122 100 == Plus
babo-RA 635..1806 1248..2419 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:49:19 Download gff for RE55648.complete
Subject Subject Range Query Range Percent Splice Strand
babo-RC 1..1788 632..2419 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:06:23 Download gff for RE55648.complete
Subject Subject Range Query Range Percent Splice Strand
babo-RA 1264..3612 1248..3596 100   Plus
babo-RA 1..1120 3..1122 100 == Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:37:03 Download gff for RE55648.complete
Subject Subject Range Query Range Percent Splice Strand
babo-RC 2..4756 2..4756 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:33:41 Download gff for RE55648.complete
Subject Subject Range Query Range Percent Splice Strand
babo-RC 3..4758 1..4756 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:13:04 Download gff for RE55648.complete
Subject Subject Range Query Range Percent Splice Strand
babo-RA 1..1120 3..1122 100 == Plus
babo-RA 1264..3612 1248..3596 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:49:19 Download gff for RE55648.complete
Subject Subject Range Query Range Percent Splice Strand
babo-RC 3..4758 1..4756 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:37:02 Download gff for RE55648.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8952341..8953029 1..689 99 -> Plus
2R 8953103..8953417 690..1004 100 -> Plus
2R 8954734..8954851 1005..1122 100 -> Plus
2R 8957029..8957156 1123..1250 100 -> Plus
2R 8959107..8959334 1251..1478 100 -> Plus
2R 8959400..8959633 1479..1712 100 -> Plus
2R 8959690..8960213 1713..2236 100 -> Plus
2R 8960277..8962796 2237..4756 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:37:02 Download gff for RE55648.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8952341..8953029 1..689 99 -> Plus
2R 8953103..8953417 690..1004 100 -> Plus
2R 8954734..8954851 1005..1122 100 -> Plus
2R 8957029..8957156 1123..1250 100 -> Plus
2R 8959107..8959334 1251..1478 100 -> Plus
2R 8959400..8959633 1479..1712 100 -> Plus
2R 8959690..8960213 1713..2236 100 -> Plus
2R 8960277..8962796 2237..4756 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:37:02 Download gff for RE55648.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8952341..8953029 1..689 99 -> Plus
2R 8953103..8953417 690..1004 100 -> Plus
2R 8954734..8954851 1005..1122 100 -> Plus
2R 8957029..8957156 1123..1250 100 -> Plus
2R 8959107..8959334 1251..1478 100 -> Plus
2R 8959400..8959633 1479..1712 100 -> Plus
2R 8959690..8960213 1713..2236 100 -> Plus
2R 8960277..8962796 2237..4756 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:33:41 Download gff for RE55648.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4846612..4846839 1251..1478 100 -> Plus
arm_2R 4844534..4844661 1123..1250 100 -> Plus
arm_2R 4839846..4840534 1..689 99 -> Plus
arm_2R 4840608..4840922 690..1004 100 -> Plus
arm_2R 4842239..4842356 1005..1122 100 -> Plus
arm_2R 4846905..4847138 1479..1712 100 -> Plus
arm_2R 4847195..4847718 1713..2236 100 -> Plus
arm_2R 4847782..4850301 2237..4756 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:49:35 Download gff for RE55648.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8953540..8954228 1..689 99 -> Plus
2R 8954302..8954616 690..1004 100 -> Plus
2R 8955933..8956050 1005..1122 100 -> Plus
2R 8958228..8958355 1123..1250 100 -> Plus
2R 8960306..8960533 1251..1478 100 -> Plus
2R 8960599..8960832 1479..1712 100 -> Plus
2R 8960889..8961412 1713..2236 100 -> Plus
2R 8961476..8963995 2237..4756 100   Plus

RE55648.pep Sequence

Translation from 631 to 2418

> RE55648.pep
MLSALRLIFLGALLGASVCASPIEFVMDTSLNGSRSDPATATHPGKWPPT
TKAPALRAPAGTAGHAYQSPSSSLAADNRSHDNNNASAVSMLLPQDGDAS
GAVAPAVTPQLPIYIAQPSAKKPENKIKCHCDTCKESNNICETDGFCFTS
VEKNSDGSIIFSYRCITDQLPPEDPTSCKLNSEAGSSQCCAEDFCNTREN
YSGVLPDYVPHRLTSWEFVAIILGATLFICFTGTSTWYYCQRRKRMASGR
TFAKEDSAYDPILNGNTTIHDIIEMTTSGSGSAGLPLLVQRSIARQVQLC
HVIGKGRFGEVWRGRWRGENVAVKIFSSREECSWFREAEIYQTVMLRHEN
ILGFIAADNKDNGTWTQLWLVTDYHENGSLFDYLTTHPVDTNTMLNMSLS
IATGLAHLHMDIVGTRGKPAIAHRDLKSKNILVKSNLSCAIGDLGLAVRH
VEKNDSVDIPSTHRVGTKRYMAPEVLDESMNDQHFDSYKRADVYAFGLIL
WEIARRCNMGMIYDEYQLPYYDVVQPDPSIEEMKKVVCIEKCRPNIPNRW
HASDVLHNMAKVMKECWYPNPVARLTALRIKKTLASISVEDKVKN*

RE55648.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 21:26:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12221-PA 624 GF12221-PA 1..624 1..595 2501 79 Plus
Dana\GF13635-PA 566 GF13635-PA 50..555 123..592 1077 45.6 Plus
Dana\GF15519-PA 530 GF15519-PA 27..520 117..590 1057 44.5 Plus
Dana\GF17542-PA 521 GF17542-PA 200..485 286..577 546 40.2 Plus
Dana\GF24409-PA 903 GF24409-PA 69..530 130..588 399 27.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 21:26:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23402-PA 601 GG23402-PA 1..601 1..595 2961 91.7 Plus
Dere\GG23304-PA 570 GG23304-PA 55..562 123..594 1091 45.8 Plus
Dere\GG24313-PA 563 GG24313-PA 62..553 120..590 1078 44.9 Plus
Dere\GG21187-PA 516 GG21187-PA 49..491 130..588 563 33 Plus
Dere\GG14225-PA 903 GG14225-PA 224..530 297..589 398 31.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 21:26:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21632-PA 477 GH21632-PA 2..477 126..595 2174 83.8 Plus
Dgri\GH13402-PA 554 GH13402-PA 55..544 122..590 1096 45.4 Plus
Dgri\GH20320-PA 568 GH20320-PA 16..560 81..594 1093 44.6 Plus
Dgri\GH14126-PA 520 GH14126-PA 199..495 286..588 566 40.4 Plus
Dgri\GH24979-PA 996 GH24979-PA 162..615 146..588 419 26.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:21:50
Subject Length Description Subject Range Query Range Score Percent Strand
babo-PC 595 CG8224-PC 1..595 1..595 3178 100 Plus
babo-PA 601 CG8224-PA 1..601 1..595 2961 93.7 Plus
babo-PB 622 CG8224-PB 1..622 1..595 2935 90.8 Plus
sax-PB 535 CG1891-PB 20..527 123..594 1066 45.2 Plus
sax-PA 570 CG1891-PA 55..562 123..594 1066 45.2 Plus
sax-PC 582 CG1891-PC 69..574 119..594 1064 45.2 Plus
tkv-PD 509 CG14026-PD 1..499 115..590 1043 44.6 Plus
tkv-PB 531 CG14026-PB 28..521 120..590 1042 44.9 Plus
tkv-PA 563 CG14026-PA 60..553 120..590 1042 44.9 Plus
tkv-PC 575 CG14026-PC 72..565 120..590 1042 44.9 Plus
put-PC 516 CG7904-PC 87..491 165..588 548 33.4 Plus
put-PA 516 CG7904-PA 87..491 165..588 548 33.4 Plus
put-PB 520 CG7904-PB 87..491 165..588 548 33.4 Plus
wit-PA 903 CG10776-PA 224..529 297..588 391 30.7 Plus
wit-PB 913 CG10776-PB 224..529 297..588 391 30.7 Plus
Raf-PE 739 CG2845-PE 425..625 293..507 225 32.7 Plus
Raf-PA 739 CG2845-PA 425..625 293..507 225 32.7 Plus
Takl1-PA 393 CG31421-PA 17..266 303..584 222 30.7 Plus
Csk-PK 723 CG42317-PK 470..715 296..584 221 28 Plus
Csk-PI 723 CG42317-PI 470..715 296..584 221 28 Plus
Csk-PJ 723 CG42317-PJ 470..715 296..584 221 28 Plus
Csk-PF 723 CG17309-PE 470..715 296..584 221 28 Plus
Csk-PH 805 CG42317-PH 552..797 296..584 221 28 Plus
Csk-PL 1052 CG42317-PL 799..1044 296..584 221 28 Plus
Csk-PG 1052 CG42317-PG 799..1044 296..584 221 28 Plus
slpr-PD 1148 CG2272-PD 128..390 296..588 196 27.3 Plus
slpr-PC 1148 CG2272-PC 128..390 296..588 196 27.3 Plus
slpr-PA 1148 CG2272-PA 128..390 296..588 196 27.3 Plus
slpr-PB 1155 CG2272-PB 128..390 296..588 196 27.3 Plus
Src42A-PA 517 CG44128-PA 254..508 303..592 188 24.3 Plus
Src42A-PB 1597 CG44128-PB 1334..1588 303..592 188 24.3 Plus
Eph-PF 1005 CG1511-PF 705..970 294..588 184 26.8 Plus
Eph-PB 1047 CG1511-PB 689..954 294..588 184 26.8 Plus
Eph-PE 1080 CG1511-PE 722..987 294..588 184 26.8 Plus
Eph-PD 1080 CG1511-PD 738..1003 294..588 184 26.8 Plus
Eph-PA 1080 CG1511-PA 722..987 294..588 184 26.8 Plus
Eph-PC 1096 CG1511-PC 738..1003 294..588 184 26.8 Plus
Gyc76C-PD 1525 CG42636-PD 571..811 314..574 184 26.5 Plus
Gyc76C-PC 1525 CG42636-PC 571..811 314..574 184 26.5 Plus
Gyc76C-PB 1525 CG42636-PB 571..811 314..574 184 26.5 Plus
Gyc76C-PA 1525 CG42636-PA 571..811 314..574 184 26.5 Plus
CG42637-PC 1525 CG42637-PC 571..811 314..574 184 26.5 Plus
CG42637-PB 1525 CG42637-PB 571..811 314..574 184 26.5 Plus
CG42637-PA 1525 CG42637-PA 571..811 314..574 184 26.5 Plus
Src64B-PD 552 CG7524-PD 283..545 296..593 173 24.2 Plus
Src64B-PC 552 CG7524-PC 283..545 296..593 173 24.2 Plus
Src64B-PI 552 CG7524-PI 283..545 296..593 173 24.2 Plus
Src64B-PH 552 CG7524-PH 283..545 296..593 173 24.2 Plus
Src64B-PF 552 CG7524-PF 283..545 296..593 173 24.2 Plus
Src64B-PJ 552 CG7524-PJ 283..545 296..593 173 24.2 Plus
Src64B-PB 552 CG7524-PB 283..545 296..593 173 24.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 21:26:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20087-PA 668 GI20087-PA 259..668 188..595 1987 89.5 Plus
Dmoj\GI19992-PA 566 GI19992-PA 59..558 109..594 1085 45.5 Plus
Dmoj\GI19788-PA 489 GI19788-PA 3..479 129..590 1083 46.8 Plus
Dmoj\GI10656-PA 519 GI10656-PA 198..494 286..588 558 39.7 Plus
Dmoj\GI11419-PA 928 GI11419-PA 234..539 297..588 406 33 Plus
Dmoj\GI20087-PA 668 GI20087-PA 16..214 19..198 235 38.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 21:26:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16719-PA 630 GL16719-PA 21..630 20..595 2178 71.3 Plus
Dper\GL18561-PA 562 GL18561-PA 68..552 127..590 1081 46.6 Plus
Dper\GL10841-PA 566 GL10841-PA 51..555 123..592 1078 46 Plus
Dper\GL23126-PA 519 GL23126-PA 63..494 142..588 553 32.5 Plus
Dper\GL16800-PA 915 GL16800-PA 226..531 297..588 390 31.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 21:26:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20910-PC 674 GA20910-PC 62..674 20..595 2352 75.3 Plus
Dpse\GA20910-PB 706 GA20910-PB 62..706 20..595 2314 71.8 Plus
Dpse\GA12709-PA 562 GA12709-PA 68..552 127..590 1081 46.6 Plus
Dpse\GA15112-PA 566 GA15112-PA 51..555 123..592 1078 46 Plus
Dpse\GA20674-PA 519 GA20674-PA 63..494 142..588 553 32.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:26:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21084-PA 617 GM21084-PA 1..617 1..595 2864 88.1 Plus
Dsec\GM20983-PA 570 GM20983-PA 55..559 123..592 1082 45.3 Plus
Dsec\GM18031-PA 563 GM18031-PA 69..553 127..590 1076 45.2 Plus
Dsec\GM25839-PA 516 GM25839-PA 195..480 286..577 549 40.5 Plus
Dsec\GM14019-PA 903 GM14019-PA 224..530 297..589 399 31.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 21:26:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10620-PA 601 GD10620-PA 1..601 1..595 2963 92 Plus
Dsim\GD10510-PA 570 GD10510-PA 55..559 123..592 1074 45.1 Plus
Dsim\GD15359-PA 507 GD15359-PA 16..496 136..592 1071 46.5 Plus
Dsim\GD20410-PA 516 GD20410-PA 114..491 189..588 551 34 Plus
Dsim\GD13298-PA 903 GD13298-PA 224..530 297..589 399 31.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 21:26:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21177-PA 599 GJ21177-PA 119..599 121..595 2147 83.8 Plus
Dvir\GJ15112-PA 551 GJ15112-PA 62..541 129..590 1080 46.3 Plus
Dvir\GJ21241-PA 568 GJ21241-PA 16..560 81..594 1072 43.7 Plus
Dvir\GJ23013-PA 518 GJ23013-PA 197..493 286..588 564 40.1 Plus
Dvir\GJ13615-PA 918 GJ13615-PA 234..539 297..588 405 33 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 21:26:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17989-PA 644 GK17989-PA 109..644 92..595 2136 75.6 Plus
Dwil\GK22220-PA 573 GK22220-PA 39..562 96..592 1091 44.4 Plus
Dwil\GK21070-PA 509 GK21070-PA 15..499 127..590 1077 46.6 Plus
Dwil\GK14450-PA 511 GK14450-PA 109..475 189..577 566 34.9 Plus
Dwil\GK18023-PA 908 GK18023-PA 69..526 140..588 405 28.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:26:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19244-PA 600 GE19244-PA 1..600 1..595 2884 90.3 Plus
Dyak\GE19150-PA 570 GE19150-PA 55..559 123..592 1085 45.5 Plus
Dyak\GE19007-PA 563 GE19007-PA 69..553 127..590 1083 45.4 Plus
Dyak\GE26437-PA 516 GE26437-PA 60..491 142..588 557 33.2 Plus
Dyak\GE20653-PA 903 GE20653-PA 224..530 297..589 397 31.3 Plus

RE55648.hyp Sequence

Translation from 631 to 2418

> RE55648.hyp
MLSALRLIFLGALLGASVCASPIEFVMDTSLNGSRSDPATATHPGKWPPT
TKAPALRAPAGTAGHAYQSPSSSLAADNRSHDNNNASAVSMLLPQDGDAS
GAVAPAVTPQLPIYIAQPSAKKPENKIKCHCDTCKESNNICETDGFCFTS
VEKNSDGSIIFSYRCITDQLPPEDPTSCKLNSEAGSSQCCAEDFCNTREN
YSGVLPDYVPHRLTSWEFVAIILGATLFICFTGTSTWYYCQRRKRMASGR
TFAKEDSAYDPILNGNTTIHDIIEMTTSGSGSAGLPLLVQRSIARQVQLC
HVIGKGRFGEVWRGRWRGENVAVKIFSSREECSWFREAEIYQTVMLRHEN
ILGFIAADNKDNGTWTQLWLVTDYHENGSLFDYLTTHPVDTNTMLNMSLS
IATGLAHLHMDIVGTRGKPAIAHRDLKSKNILVKSNLSCAIGDLGLAVRH
VEKNDSVDIPSTHRVGTKRYMAPEVLDESMNDQHFDSYKRADVYAFGLIL
WEIARRCNMGMIYDEYQLPYYDVVQPDPSIEEMKKVVCIEKCRPNIPNRW
HASDVLHNMAKVMKECWYPNPVARLTALRIKKTLASISVEDKVKN*

RE55648.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:12:40
Subject Length Description Subject Range Query Range Score Percent Strand
babo-PC 595 CG8224-PC 1..595 1..595 3178 100 Plus
babo-PA 601 CG8224-PA 1..601 1..595 2961 93.7 Plus
babo-PB 622 CG8224-PB 1..622 1..595 2935 90.8 Plus
sax-PB 535 CG1891-PB 20..527 123..594 1066 45.2 Plus
sax-PA 570 CG1891-PA 55..562 123..594 1066 45.2 Plus