BDGP Sequence Production Resources |
Search the DGRC for RE55691
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 556 |
Well: | 91 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14545-RA |
Protein status: | RE55691.pep: gold |
Preliminary Size: | 270 |
Sequenced Size: | 829 |
Gene | Date | Evidence |
---|---|---|
CG14545 | 2001-12-14 | Blastp of sequenced clone |
CG14545 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14545 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14545 | 2008-04-29 | Release 5.5 accounting |
CG14545 | 2008-08-15 | Release 5.9 accounting |
CG14545 | 2008-12-18 | 5.12 accounting |
829 bp (829 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071494
> RE55691.complete GCAGCCCTCGCTTTACAGTTATTCCCGCCACCACAAGATCAATTGGAAAT TTCACAATTTGCCAAATTTATTACCAAATTGGTCGTTTTAAACACGTAAC ATGTCGGAAAGAGAAGAAGAATCGATTGCATACTTGATGGAAAATGGCAT TTTCCCTCGACTTCTGGAGATTTTAAAGCAAATGGTGGATATCGATCCGT TGCCATCGGACCCTCTGATGCACATTTTGCATTTTCTGGGCTGTCCGCTA ATTCCGCAGGCCCAAATGAAGGCCCTGGAGCGGAAAGTGTCGCGTGCCCA TGATGAGCTGCGCCATTTGCGCCGTTTGATCATCGATTTGGATGCCTTGG ATCAGCTTTACGATGGCGAAAACGAAGTGGAGGAGTATGTGGGCAATGTG GAGGAAGCCGTCTCATCATCGAGCGAAGATTCCATGGTGGAGAGCATTGA GACTACGATGGACTCCACGAAACCGGAGCTTGGGCTATGTACACCGATGT CATCGCTCAAGGATTCAAATCCTTCAAATCCATAGATCGCACAGTATCGA ATCACATTTGTCGTTGAGCCTTTATTATGTACTGGATACATATCTTTGGC AACTGCATGTGAGTTTTGGATGCATATTTCTATTACATTTTGTTTATTCG ACGCAATGTGAGATGTAACCTCGACTTTTTATCAAGTGAACGTATAACAT TGTATTGTGTACATGCCATACTTATCCATTAAAAATTGTTGACCAGCATG ATGTATGGAAAATGTTTTGTTCCTTTTCATATTAAAAATACTCAATGGAT TTCTCTTAAAACTAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14545-RA | 1048 | CG14545-RA | 194..1013 | 1..820 | 4085 | 99.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 21673378..21673931 | 260..813 | 99 | <- | Minus |
chr3R | 21674001..21674259 | 1..259 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14545-RA | 1..435 | 101..535 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14545-RA | 1..435 | 101..535 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14545-RA | 1..435 | 101..535 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14545-RA | 1..435 | 101..535 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14545-RA | 1..435 | 101..535 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14545-RA | 1..813 | 1..813 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14545-RA | 1..813 | 1..813 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14545-RA | 1..813 | 1..813 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14545-RA | 1..813 | 1..813 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14545-RA | 1..813 | 1..813 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25850410..25850963 | 260..813 | 100 | <- | Minus |
3R | 25851033..25851291 | 1..259 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25850410..25850963 | 260..813 | 100 | <- | Minus |
3R | 25851033..25851291 | 1..259 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25850410..25850963 | 260..813 | 100 | <- | Minus |
3R | 25851033..25851291 | 1..259 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 21676132..21676685 | 260..813 | 100 | <- | Minus |
arm_3R | 21676755..21677013 | 1..259 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25591241..25591794 | 260..813 | 100 | <- | Minus |
3R | 25591864..25592122 | 1..259 | 100 | Minus |
Translation from 100 to 534
> RE55691.pep MSEREEESIAYLMENGIFPRLLEILKQMVDIDPLPSDPLMHILHFLGCPL IPQAQMKALERKVSRAHDELRHLRRLIIDLDALDQLYDGENEVEEYVGNV EEAVSSSSEDSMVESIETTMDSTKPELGLCTPMSSLKDSNPSNP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18229-PA | 162 | GF18229-PA | 1..108 | 1..108 | 393 | 69.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12213-PA | 144 | GG12213-PA | 1..144 | 1..144 | 565 | 78.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23392-PA | 176 | GH23392-PA | 1..115 | 1..107 | 332 | 56.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14545-PA | 144 | CG14545-PA | 1..144 | 1..144 | 733 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10337-PA | 159 | GI10337-PA | 1..102 | 1..102 | 331 | 63.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22293-PA | 179 | GL22293-PA | 1..101 | 1..101 | 343 | 64.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13070-PA | 179 | GA13070-PA | 1..101 | 1..101 | 340 | 63.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10210-PA | 132 | GM10210-PA | 1..132 | 1..138 | 587 | 87.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18162-PA | 134 | GD18162-PA | 1..134 | 1..138 | 606 | 89.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10191-PA | 173 | GJ10191-PA | 1..102 | 1..102 | 361 | 66.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14386-PA | 144 | GK14386-PA | 1..105 | 1..105 | 322 | 62.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10658-PA | 137 | GE10658-PA | 1..136 | 1..143 | 536 | 78.3 | Plus |
Translation from 100 to 534
> RE55691.hyp MSEREEESIAYLMENGIFPRLLEILKQMVDIDPLPSDPLMHILHFLGCPL IPQAQMKALERKVSRAHDELRHLRRLIIDLDALDQLYDGENEVEEYVGNV EEAVSSSSEDSMVESIETTMDSTKPELGLCTPMSSLKDSNPSNP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14545-PA | 144 | CG14545-PA | 1..144 | 1..144 | 733 | 100 | Plus |