Clone RE56564 Report

Search the DGRC for RE56564

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:565
Well:64
Vector:pFlc-1
Associated Gene/TranscriptCG42492-RA
Protein status:RE56564.pep: gold
Preliminary Size:2973
Sequenced Size:4222

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11473 2001-12-14 Blastp of sequenced clone
CG11473 2002-01-01 Sim4 clustering to Release 2
CG11473 2003-01-01 Sim4 clustering to Release 3
CG11473 2008-04-29 Release 5.5 accounting
CG11473 2008-08-15 Release 5.9 accounting
CG42492 2008-12-18 5.12 accounting

Clone Sequence Records

RE56564.complete Sequence

4222 bp (4222 high quality bases) assembled on 2001-12-14

GenBank Submission: AY071510

> RE56564.complete
TCAGTTGTAGTTGGATAGTAAAGGGTCTTGGACGTATCGAGCGAATCGTT
CGCCAGAGTTGCCGCAATACATAATTACGAACTGTGAAGTGAAATTGACG
GATAATATAAAACCGAAAAAATAGTAGAGGTAACCGGCGCGAAGGACCAA
ACAATCCTATCGCCTATCGATAGAGAAATCGGAAATCAGATCGTCGACAA
AAAAGCCAGCACAACGGAGACCGAAACGGAAACGGAAACAATGGGCGGCG
GTGAAGTGAAGGTCGCTACCGTCGACGTCGAGGGCGGGGACAATATGGCC
ACCTTGCCGGTGTCCCGCTCGCATACCGCCGGCAGCACCGACAGCGCCGA
GAAGAACAACGCCGCCAACAAGGAGATGGAACTCAAGAACGTCATGCCGC
AGCCGCTGCAGAGGACATCGCTGTTCATCGTGACCAGTCTGGTGTACGCG
ATCCTTCTGATCGTCGTGTGCATTGCATACGTTATCAGCGATGTAACCAC
CCACCGACTGCCGGTTTTGTACTACGAGACATTCTTCACATATCTATACG
GCGTCAGCATACTCTTCCTTCTCTACGTCTTCTGTTTCCTGCTGCAGGAG
AGCTCTTGCTGCAATGGCGGCAATGGTGGCAGCAAACCGAAACCCCAGCC
CAAGGAGAAGAAGTCGAAGAAAGCCAAAAATGCCGATCCGGCCGATTCGA
AGGATGCGAAGGGCTCTAAGGACTCTGGCAAGGCAGCCAAGGGCGCCGCA
TATCAGGAAGCACCCGTGGACGCCGAGGTGGCCGTCACTCCAAAGAATGT
GCGCAAGCGCAAGACAACCCATAGTGATCTGACGCACGGCAGCTTTTTCC
TGCGAGTGGGAGCCATTGCTTTCGGTTTGGGCGCCATGATCTATATTGGC
CTGGAGTTTGGATCGTTCTTTGAGATACCCTTCGATTCGCCGTGTCATCA
CATCCTGATCGGCGTAAATCCGCTGCTCCAGATGATCTTCACCTTCATGC
AGATGTACTTTATATTCATGAATGCCCGGCTGAACATCCATCGCTTCAAG
GTGATCGCTCGCTTTGGCCTGATGCATGTGGTGGCCACCAACATTTGCGT
ATGGATTCGCACCCTGGTTAAGGAATCGCTGCTGGAGATCACGATCTATC
ATCAGAAGAACGAGCCAGAGGCCGGCGCCTCGTCCATAGCCCACTCGATT
CGTCAGCACGCCCTGCGGCATGCGGGCACCGTGCTGCGCACCCATGCGGG
ACCCAACAGCGAATTCGAGGTGCTCGACGGCGAGGACATTCTGCCCAAGG
ATGTGTACAAGAGCGACAATGTGCTATCCAAGCTGGTGCGCAATACCGTC
GATGGTATTTCAAAGAGCCTGGGCATGGGCGGTGACCAGGCGCTAGACAG
CAGCACCACCAGCAGCAGCACCACAACGACCACGCGAGCTCCGTTCACCA
CACCGAACTACCAATGGCACAGCACTACTATGGCCCGCAAGCTGAAGAAG
TTTATCACCAGCGCCACCACCGCGGCCACAACGGCGGCGGGCAGCAGCAG
CACCGCCAGCAGTACCACCACCATTTCACCGACCATCAGTAGCACCACCA
TTCCGTCGACCACCATCAGTAGCACCACCATCTCATCGAGCACCACTTTC
AGTCCATTTAGCCCCTCCACCACCACCACCACCACCACCACCGCTGCCGC
CCTGAATCTCGAGACCAGCGGCAGTGAATCGCCCTTCGGCGGCCTGCAGC
GCATCCTCTCTAGCGCTGCGCCGCCGAGCCTGGCGCCAGTCGATGGGTTC
GGTTCCGCTTCCGCTGCCACGCCCACATCCGGTTCCGGCGCCGGCTCATT
TGTAGACTCCTTCCTGGCCAGCACACTAAGCCCGGCCAGCAGCACCGAGG
GCTCGGCCAGCATTATGAACAACCTTTTCGGCCAGGGACCCATGGAGAAT
AGCTTCCAGACATACACCGATCTGGGCCACGAGGAGGCCACCGGTCTGGT
GAGCTTCGAGAATCTAGAGAGTCTGGACAACATATACCCGGCGGCGCTGT
CCTCCAATATCGGCACACTCAACTCCACCGCCTGCGGACGCATCGACATA
ATGGGCACCATTGTCTACGATTCGGCGCCCTACCTCTATCCGTTCATCAT
CGAGTATTCGCTGATCGGGGCGGTGGTGTTGTATGTCATGTGGAAGCACA
TCGGCCGCTATCCGGGCCGGATGAACGACGAGGATTTGGAGCATCGGCTG
GAGGTGATGTTATCGCGGCGGGCGGTTGCCATGGCGCAGCAGGCGCGATC
CGGACGCGTCGACTGCGTCGGCTCGTCGAAGGGCCTGTTCTTCGGGCTCC
TGCTGCTGGTCGGGGCCCTCATCTGCCTGATACTCTTCTTCGTCTTGGTG
CGCCATCAGCAGTTCTCGCTGTTGGCCATTTACCTCGCCGACGCCAGCCA
CTGCATCCTGATGGCGTTCGCCATTCTGGCCATTATTGTGGGATTCATCA
GGGTCAAAAACCTGAAGTTCCGCTGCGAGGAGCAGTCCAATCTGAACGAC
ATCTTGCTGCGCATCTCGGCCTTCGGCCTGTTCACCTACTCCGTGTTCAG
CATTATCGCCGGTAGCCTGAAGGTCCTGGAGAGCGAGCCCAGCCTGCTGG
TCACGACCACCGGTGGTGTGGCCGTCTTCCAGGTGATCCTGCAGCTGCTG
TTCATCGCGGACGTGTCCCGCCGTCGCGTCCACCTGCCGGAGCACGACCG
GAGCAAGCCGGGCCGCCAGATCGTCACGTTCCTTCTCATCTGCAACGTGG
CCATGTTCGCCATCTACACATTCGAAGCTCAAAAAGTATTCGCCAATCCT
GTTCAGCTGGAGTTCTACGGCTTCGTGCCCTGGTCGATCATCCAGCGCAT
CACACTGCCGCTGTGCATCTTCCATCGATTCCACAGCGCCGTGACACTCG
CCGAGATCTGGAAGACCACCTACAAGGCACGTCTGGAGTAAGGCGATGCC
TGGATCCCGATGTCTATATAGGCCGATGATGGGTGGGAGTTATGAAAATG
CACCAAAACCAAAATGTAGCGAGCCGAGAACGCGAACGGAAATCAAGTGA
AGAGTTAGGTTCTAATTACGTACTAAACATATATGCATACTACATATAAT
ATATACATTAGTGCAGATATGTACGAGAGCATATTATGACGTTTTTTTTT
TTGTTTGAGGAAACCAAAGCGAAACGAAATGAGTAACGAAACGAACGAAA
CAATCGGACCAATCTGCGCGATTAACAATTAACGATTGCCAACCGATAAC
GATTGCAGGTCGCTTGTTCATTTCCCCCCACCACAAAAACACTTTCCTTT
TTTACTTTGTTAACTCGTGGAGAACTTAAGAACCTTAAGATCTAAGTCAT
AGCGTTTACAGTTTAACGAAAAACTTAGAACCAAGAACCACGGCACATGT
TTTTAATCTGATTTACGTATTTAATTTAGTTTTAGTTTAGTTTCGCCTCT
AACACGCTGCAATATCTTGTTACTAAATCGAAACTACAAGTTAATATTAA
TTTCATAATTGTTTAACCATTATCCGCTTCGGCAACCGAAACCAAAACGA
AATCGATTAAAAAAATTCACATTACAAATAAGATGGAAAATATTCTGAAA
ACACAAAACAAATGGTTGTTTACTTTTCGCGTGTTTTTCGCGACTGCGAA
TGAGGGGAAATCCCCGTGACTATACACTGAAACACAAAACAGGGACACAC
AATGATGCAATGCCATGAAGAACGCGGCCACAGGAAACGGAAATGAAACG
AAACGGTAACACAGCCCGGAAACGGAAACGAAATTCGATCTGATCTGACT
TTTCCACCAATCGAGAACAACAACAACAAGAACAACAGTAACAGCCGAAC
AACAACAAACTGTGATGAATTCATATGATTTACTGGTATAATTTGCAATT
CGATTACATTTCTGTTCCCGACTTGATTTAAGCCTTTAAGCCCTTTCGTT
TTTTTATTCTCAGCCACAAGTCACTAACTGAGTCGACAAAACTTTTGTAA
GAATTTAGAAACAATGGCGCTAAGACAACTTCATGGCCAATTGTAAAAAC
AAATTGCCCGAAACACCATTACTAAAAACAAAATAATACAAAAAAAAAAA
CCCAAAGAAAACAAAGAAAATTGTGGCATTTAATGGCCAGAAATACAAAA
AACCACAAAAAAAAAAAAAAAA

RE56564.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:45:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG42492.c 5789 CG42492.c 1..4222 1..4222 21095 99.9 Plus
CG42492.e 4698 CG42492.e 489..4698 1..4210 21050 100 Plus
CG42492-RA 4212 CG42492-RA 3..4212 1..4210 21050 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:17:27
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 5522425..5523898 2502..1029 7355 99.9 Minus
chrX 22417052 chrX 5520065..5521418 4205..2851 6650 99.7 Minus
chrX 22417052 chrX 5528621..5528980 414..55 1800 100 Minus
chrX 22417052 chrX 5521797..5522149 2852..2500 1765 100 Minus
chrX 22417052 chrX 5526638..5526824 598..412 935 100 Minus
chrX 22417052 chrX 5525506..5525672 1029..863 805 98.8 Minus
chrX 22417052 chrX 5526267..5526426 757..598 800 100 Minus
chrX 22417052 chrX 5525751..5525865 868..754 575 100 Minus
chrX 22417052 chrX 5529935..5529990 56..1 280 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:04:40 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:17:23
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5630023..5631496 2502..1029 7370 100 Minus
X 23542271 X 5627653..5629024 4222..2851 6845 99.9 Minus
X 23542271 X 5636221..5636580 414..55 1800 100 Minus
X 23542271 X 5629395..5629747 2852..2500 1765 100 Minus
X 23542271 X 5634241..5634427 598..412 935 100 Minus
X 23542271 X 5633106..5633272 1029..863 820 99.4 Minus
X 23542271 X 5633870..5634029 757..598 800 100 Minus
X 23542271 X 5633354..5633468 868..754 575 100 Minus
X 23542271 X 5637535..5637590 56..1 280 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:11:48
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 5638121..5639594 2502..1029 7370 100 Minus
X 23527363 X 5635751..5637122 4222..2851 6845 99.9 Minus
X 23527363 X 5644319..5644678 414..55 1800 100 Minus
X 23527363 X 5637493..5637845 2852..2500 1765 100 Minus
X 23527363 X 5642339..5642525 598..412 935 100 Minus
X 23527363 X 5641204..5641370 1029..863 820 99.4 Minus
X 23527363 X 5641968..5642127 757..598 800 100 Minus
X 23527363 X 5641452..5641566 868..754 575 100 Minus
X 23527363 X 5645633..5645688 56..1 280 100 Minus
Blast to na_te.dros performed 2019-03-16 21:17:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2489..2815 1397..1723 220 58.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6662..6928 1455..1713 214 58.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2309..2545 1397..1633 209 60.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6691..6944 1426..1677 201 59.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..6943 1398..1619 191 59 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6725..6907 1470..1652 176 56.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6734..6884 1542..1692 161 58.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2352..2533 1398..1573 157 58.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2314..2511 1504..1692 156 59 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2544 1446..1686 155 56.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6764..6956 1398..1593 152 58 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6721..6927 1488..1690 150 55.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2396..2535 1397..1538 137 59 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6796..6926 1397..1524 133 58.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6785..6953 1398..1563 125 55.9 Plus
GATE 8507 GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). 948..1020 3127..3199 121 66.2 Plus
roo 9092 roo DM_ROO 9092bp 1123..1175 1397..1452 119 73.2 Plus

RE56564.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:18:18 Download gff for RE56564.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 5520064..5521014 3254..4206 95 == Minus
chrX 5521067..5521418 2851..3202 99 <- Minus
chrX 5521799..5522147 2502..2850 100 <- Minus
chrX 5522426..5523280 1647..2501 96 == Minus
chrX 5523424..5523897 1030..1503 100 <- Minus
chrX 5525506..5525666 869..1029 99 <- Minus
chrX 5525751..5525862 757..868 100 <- Minus
chrX 5526268..5526425 599..756 100 <- Minus
chrX 5526638..5526822 414..598 100 <- Minus
chrX 5528622..5528978 57..413 100 <- Minus
chrX 5529935..5529990 1..56 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:25:03 Download gff for RE56564.complete
Subject Subject Range Query Range Percent Splice Strand
CG42492-RA 1..2751 241..2991 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:12:08 Download gff for RE56564.complete
Subject Subject Range Query Range Percent Splice Strand
CG42492-RA 1..2751 241..2991 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:36:41 Download gff for RE56564.complete
Subject Subject Range Query Range Percent Splice Strand
CG42492-RA 1..2751 241..2991 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:36:22 Download gff for RE56564.complete
Subject Subject Range Query Range Percent Splice Strand
CG11473-RA 1..2751 241..2991 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:13:42 Download gff for RE56564.complete
Subject Subject Range Query Range Percent Splice Strand
CG42492-RA 1..2751 241..2991 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:42:41 Download gff for RE56564.complete
Subject Subject Range Query Range Percent Splice Strand
CG42492-RA 1..4206 1..4206 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:12:08 Download gff for RE56564.complete
Subject Subject Range Query Range Percent Splice Strand
CG42492-RA 1..4206 1..4206 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:36:41 Download gff for RE56564.complete
Subject Subject Range Query Range Percent Splice Strand
CG42492-RA 5..4210 1..4206 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:36:22 Download gff for RE56564.complete
Subject Subject Range Query Range Percent Splice Strand
CG11473-RA 1..4206 1..4206 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:13:42 Download gff for RE56564.complete
Subject Subject Range Query Range Percent Splice Strand
CG42492-RA 5..4210 1..4206 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:18:18 Download gff for RE56564.complete
Subject Subject Range Query Range Percent Splice Strand
X 5633871..5634028 599..756 100 <- Minus
X 5634241..5634425 414..598 100 <- Minus
X 5633354..5633465 757..868 100 <- Minus
X 5627669..5629024 2851..4206 100 <- Minus
X 5629397..5629745 2502..2850 100 <- Minus
X 5630024..5631495 1030..2501 100 <- Minus
X 5633106..5633266 869..1029 100 <- Minus
X 5636222..5636578 57..413 100 <- Minus
X 5637535..5637590 1..56 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:18:18 Download gff for RE56564.complete
Subject Subject Range Query Range Percent Splice Strand
X 5633871..5634028 599..756 100 <- Minus
X 5634241..5634425 414..598 100 <- Minus
X 5633354..5633465 757..868 100 <- Minus
X 5627669..5629024 2851..4206 100 <- Minus
X 5629397..5629745 2502..2850 100 <- Minus
X 5630024..5631495 1030..2501 100 <- Minus
X 5633106..5633266 869..1029 100 <- Minus
X 5636222..5636578 57..413 100 <- Minus
X 5637535..5637590 1..56 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:18:18 Download gff for RE56564.complete
Subject Subject Range Query Range Percent Splice Strand
X 5633871..5634028 599..756 100 <- Minus
X 5634241..5634425 414..598 100 <- Minus
X 5633354..5633465 757..868 100 <- Minus
X 5627669..5629024 2851..4206 100 <- Minus
X 5629397..5629745 2502..2850 100 <- Minus
X 5630024..5631495 1030..2501 100 <- Minus
X 5633106..5633266 869..1029 100 <- Minus
X 5636222..5636578 57..413 100 <- Minus
X 5637535..5637590 1..56 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:36:41 Download gff for RE56564.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 5521702..5523057 2851..4206 100 <- Minus
arm_X 5523430..5523778 2502..2850 100 <- Minus
arm_X 5524057..5525528 1030..2501 100 <- Minus
arm_X 5527139..5527299 869..1029 100 <- Minus
arm_X 5527387..5527498 757..868 100 <- Minus
arm_X 5527904..5528061 599..756 100 <- Minus
arm_X 5528274..5528458 414..598 100 <- Minus
arm_X 5530255..5530611 57..413 100 <- Minus
arm_X 5531568..5531623 1..56 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:13:46 Download gff for RE56564.complete
Subject Subject Range Query Range Percent Splice Strand
X 5641969..5642126 599..756 100 <- Minus
X 5642339..5642523 414..598 100 <- Minus
X 5641452..5641563 757..868 100 <- Minus
X 5635767..5637122 2851..4206 100 <- Minus
X 5637495..5637843 2502..2850 100 <- Minus
X 5638122..5639593 1030..2501 100 <- Minus
X 5641204..5641364 869..1029 100 <- Minus
X 5644320..5644676 57..413 100 <- Minus
X 5645633..5645688 1..56 100   Minus

RE56564.pep Sequence

Translation from 240 to 2990

> RE56564.pep
MGGGEVKVATVDVEGGDNMATLPVSRSHTAGSTDSAEKNNAANKEMELKN
VMPQPLQRTSLFIVTSLVYAILLIVVCIAYVISDVTTHRLPVLYYETFFT
YLYGVSILFLLYVFCFLLQESSCCNGGNGGSKPKPQPKEKKSKKAKNADP
ADSKDAKGSKDSGKAAKGAAYQEAPVDAEVAVTPKNVRKRKTTHSDLTHG
SFFLRVGAIAFGLGAMIYIGLEFGSFFEIPFDSPCHHILIGVNPLLQMIF
TFMQMYFIFMNARLNIHRFKVIARFGLMHVVATNICVWIRTLVKESLLEI
TIYHQKNEPEAGASSIAHSIRQHALRHAGTVLRTHAGPNSEFEVLDGEDI
LPKDVYKSDNVLSKLVRNTVDGISKSLGMGGDQALDSSTTSSSTTTTTRA
PFTTPNYQWHSTTMARKLKKFITSATTAATTAAGSSSTASSTTTISPTIS
STTIPSTTISSTTISSSTTFSPFSPSTTTTTTTTAAALNLETSGSESPFG
GLQRILSSAAPPSLAPVDGFGSASAATPTSGSGAGSFVDSFLASTLSPAS
STEGSASIMNNLFGQGPMENSFQTYTDLGHEEATGLVSFENLESLDNIYP
AALSSNIGTLNSTACGRIDIMGTIVYDSAPYLYPFIIEYSLIGAVVLYVM
WKHIGRYPGRMNDEDLEHRLEVMLSRRAVAMAQQARSGRVDCVGSSKGLF
FGLLLLVGALICLILFFVLVRHQQFSLLAIYLADASHCILMAFAILAIIV
GFIRVKNLKFRCEEQSNLNDILLRISAFGLFTYSVFSIIAGSLKVLESEP
SLLVTTTGGVAVFQVILQLLFIADVSRRRVHLPEHDRSKPGRQIVTFLLI
CNVAMFAIYTFEAQKVFANPVQLEFYGFVPWSIIQRITLPLCIFHRFHSA
VTLAEIWKTTYKARLE*

RE56564.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 21:17:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21285-PA 811 GF21285-PA 1..564 1..581 2296 83 Plus
Dana\GF21285-PA 811 GF21285-PA 559..811 664..916 1287 99.6 Plus
Dana\GF21283-PA 657 GF21283-PA 256..529 615..899 542 38.9 Plus
Dana\GF22452-PA 835 GF22452-PA 536..833 614..914 473 35.2 Plus
Dana\GF21283-PA 657 GF21283-PA 3..231 78..328 408 34.5 Plus
Dana\GF22452-PA 835 GF22452-PA 229..477 9..319 317 29.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 21:17:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18487-PA 919 GG18487-PA 1..919 1..916 4805 98.5 Plus
Dere\GG18485-PA 641 GG18485-PA 258..531 615..899 545 39.3 Plus
Dere\GG24451-PA 779 GG24451-PA 479..777 613..914 481 35.4 Plus
Dere\GG18485-PA 641 GG18485-PA 3..233 78..328 416 35.3 Plus
Dere\GG24451-PA 779 GG24451-PA 173..451 2..328 322 28.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 21:17:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11873-PA 905 GH11873-PA 1..905 1..916 3855 85.5 Plus
Dgri\GH11870-PA 656 GH11870-PA 257..530 615..899 552 39.3 Plus
Dgri\GH24539-PA 804 GH24539-PA 504..802 613..914 489 37 Plus
Dgri\GH11870-PA 656 GH11870-PA 3..232 78..328 402 34.6 Plus
Dgri\GH24539-PA 804 GH24539-PA 196..449 9..339 341 30.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:24:51
Subject Length Description Subject Range Query Range Score Percent Strand
OtopLa-PA 916 CG42492-PA 1..916 1..916 4648 100 Plus
OtopLa-PC 991 CG42492-PC 127..991 59..916 4336 99.2 Plus
OtopLa-PD 977 CG42492-PD 95..977 51..916 4325 97.6 Plus
OtopLa-PG 958 CG42492-PG 89..958 58..916 4323 98.6 Plus
OtopLa-PE 979 CG42492-PE 111..979 59..916 4321 98.7 Plus
OtopLa-PF 917 CG42492-PF 89..909 58..871 4095 99 Plus
OtopLc-PE 1455 CG42265-PE 1163..1451 615..914 575 40 Plus
OtopLc-PD 1576 CG42265-PD 1163..1451 615..914 575 40 Plus
OtopLc-PF 1596 CG42265-PF 1163..1451 615..914 575 40 Plus
OtopLb-PB 629 CG3332-PB 301..627 594..914 462 34.8 Plus
OtopLb-PD 647 CG3332-PD 319..645 594..914 462 34.8 Plus
OtopLb-PC 796 CG3332-PC 468..794 594..914 462 34.8 Plus
OtopLb-PA 797 CG3332-PA 469..795 594..914 462 34.8 Plus
OtopLc-PE 1455 CG42265-PE 883..1138 52..328 443 36.2 Plus
OtopLc-PD 1576 CG42265-PD 883..1138 52..328 443 36.2 Plus
OtopLc-PF 1596 CG42265-PF 883..1138 52..328 443 36.2 Plus
OtopLb-PB 629 CG3332-PB 23..301 2..328 317 27.5 Plus
OtopLb-PD 647 CG3332-PD 41..319 2..328 317 27.5 Plus
OtopLb-PC 796 CG3332-PC 190..468 2..328 317 27.5 Plus
OtopLb-PA 797 CG3332-PA 191..469 2..328 317 27.5 Plus
CG34220-PA 726 CG34220-PA 85..197 387..498 191 38.1 Plus
Muc96D-PA 881 CG31439-PA 207..312 388..493 191 37.7 Plus
CG46026-PA 666 CG46026-PA 344..532 386..557 189 35.9 Plus
Muc96D-PA 881 CG31439-PA 377..483 387..493 186 37.4 Plus
Muc96D-PA 881 CG31439-PA 461..565 389..493 183 37.1 Plus
CG46026-PA 666 CG46026-PA 527..666 387..530 183 33.3 Plus
CG34220-PA 726 CG34220-PA 54..166 384..493 182 37.2 Plus
CG46026-PA 666 CG46026-PA 259..430 386..557 182 34.3 Plus
CG34220-PA 726 CG34220-PA 75..235 387..553 179 29.9 Plus
Muc96D-PA 881 CG31439-PA 617..723 387..493 179 36.4 Plus
CG46026-PA 666 CG46026-PA 238..416 387..557 179 32.4 Plus
CG46026-PA 666 CG46026-PA 480..651 382..557 179 33.5 Plus
Muc96D-PA 881 CG31439-PA 277..378 387..493 178 37.4 Plus
Muc96D-PA 881 CG31439-PA 448..567 387..498 178 35 Plus
Muc96D-PA 881 CG31439-PA 151..257 387..493 177 36.4 Plus
Muc96D-PA 881 CG31439-PA 154..260 387..493 176 36.4 Plus
CG46026-PA 666 CG46026-PA 446..617 386..557 176 35.4 Plus
Muc96D-PA 881 CG31439-PA 325..486 388..552 175 26.7 Plus
Muc96D-PA 881 CG31439-PA 587..695 387..493 175 36.7 Plus
Muc96D-PA 881 CG31439-PA 600..763 389..553 175 28.5 Plus
Muc96D-PA 881 CG31439-PA 179..284 387..493 175 36.4 Plus
Muc96D-PA 881 CG31439-PA 269..375 387..493 174 35.5 Plus
Muc96D-PA 881 CG31439-PA 493..595 387..493 174 36.4 Plus
Muc96D-PA 881 CG31439-PA 192..298 387..493 173 35.5 Plus
Muc96D-PA 881 CG31439-PA 240..345 388..493 173 35.8 Plus
Muc96D-PA 881 CG31439-PA 297..403 387..493 173 35.5 Plus
Muc96D-PA 881 CG31439-PA 408..513 387..493 173 37.4 Plus
Muc96D-PA 881 CG31439-PA 608..753 387..532 173 30.1 Plus
Muc96D-PA 881 CG31439-PA 432..537 387..493 172 36.4 Plus
Muc96D-PA 881 CG31439-PA 514..619 387..493 172 36.4 Plus
Muc96D-PA 881 CG31439-PA 522..628 387..493 172 36.4 Plus
CG32642-PE 373 CG32642-PE 218..373 388..548 172 29.8 Plus
CG32642-PB 373 CG32642-PB 218..373 388..548 172 29.8 Plus
Muc96D-PA 881 CG31439-PA 352..458 387..493 171 35.5 Plus
Muc96D-PA 881 CG31439-PA 573..667 389..484 171 39.6 Plus
CG46026-PA 666 CG46026-PA 163..328 387..557 171 32.4 Plus
CG46026-PA 666 CG46026-PA 202..362 387..557 171 31 Plus
Mur82C-PB 578 CG12586-PB 201..396 387..579 171 29.1 Plus
Muc96D-PA 881 CG31439-PA 159..266 387..498 170 35.7 Plus
Muc96D-PA 881 CG31439-PA 244..350 387..493 170 35.5 Plus
Muc96D-PA 881 CG31439-PA 295..406 387..498 170 34.8 Plus
Muc96D-PA 881 CG31439-PA 310..414 387..495 170 36.7 Plus
Muc96D-PA 881 CG31439-PA 343..496 387..552 170 27.1 Plus
CG46026-PA 666 CG46026-PA 293..464 386..557 170 32 Plus
Muc96D-PA 881 CG31439-PA 549..652 387..493 169 36.4 Plus
Muc96D-PA 881 CG31439-PA 225..388 387..552 168 25.9 Plus
Muc96D-PA 881 CG31439-PA 423..529 387..493 168 34.6 Plus
CG14120-PA 1371 CG14120-PA 424..653 377..605 168 28.3 Plus
Muc96D-PA 881 CG31439-PA 177..283 387..493 167 35.5 Plus
Muc96D-PA 881 CG31439-PA 292..402 388..493 167 35.1 Plus
Muc96D-PA 881 CG31439-PA 497..605 387..493 167 35.8 Plus
Muc96D-PA 881 CG31439-PA 637..766 387..516 167 32.3 Plus
CG46026-PA 666 CG46026-PA 214..379 381..557 166 30.5 Plus
Muc96D-PA 881 CG31439-PA 392..498 387..493 165 34.6 Plus
Muc96D-PA 881 CG31439-PA 444..550 387..493 165 34.6 Plus
Muc96D-PA 881 CG31439-PA 521..627 387..493 165 35.5 Plus
CG46026-PA 666 CG46026-PA 323..469 387..552 165 30.7 Plus
CG46026-PA 666 CG46026-PA 463..634 383..557 165 30.6 Plus
Muc96D-PA 881 CG31439-PA 110..224 387..493 164 34.8 Plus
Muc96D-PA 881 CG31439-PA 335..441 387..493 164 35.5 Plus
Muc96D-PA 881 CG31439-PA 336..442 387..493 164 35.5 Plus
Muc96D-PA 881 CG31439-PA 530..636 387..493 164 34.6 Plus
CG46026-PA 666 CG46026-PA 271..447 387..557 164 31.6 Plus
Muc96D-PA 881 CG31439-PA 577..683 387..493 163 34.6 Plus
CG4066-PA 588 CG4066-PA 71..292 356..557 163 29.2 Plus
CG46026-PA 666 CG46026-PA 441..600 387..557 162 34.5 Plus
CG32642-PE 373 CG32642-PE 256..371 387..497 162 36.2 Plus
CG32642-PB 373 CG32642-PB 256..371 387..497 162 36.2 Plus
Mur29B-PA 555 CG31901-PA 102..375 363..616 162 25.5 Plus
Muc96D-PA 881 CG31439-PA 129..232 385..493 161 36.6 Plus
Muc96D-PA 881 CG31439-PA 142..244 387..493 161 35.5 Plus
Mur11Da-PD 626 CG32644-PD 353..516 386..552 161 31.8 Plus
CG32642-PE 373 CG32642-PE 226..370 372..516 160 31.3 Plus
CG32642-PB 373 CG32642-PB 226..370 372..516 160 31.3 Plus
Mur29B-PA 555 CG31901-PA 123..407 358..616 160 28 Plus
Muc4B-PC 496 CG32774-PC 200..368 384..553 160 30.7 Plus
Muc4B-PB 496 CG32774-PB 200..368 384..553 160 30.7 Plus
Muc26B-PA 471 CG13990-PA 225..375 387..530 159 32.9 Plus
CG14419-PA 195 CG14419-PA 21..106 384..484 152 42.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 21:17:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15661-PA 874 GI15661-PA 1..874 19..916 3718 83.9 Plus
Dmoj\GI15657-PA 549 GI15657-PA 257..545 615..914 589 40.3 Plus
Dmoj\GI15657-PA 549 GI15657-PA 3..232 78..328 401 34 Plus
Dmoj\GI16502-PA 264 GI16502-PA 22..262 681..914 367 35.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 21:17:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16469-PA 358 GL16469-PA 1..358 559..916 1854 96.9 Plus
Dper\GL16468-PA 220 GL16468-PA 1..194 1..190 806 92.3 Plus
Dper\GL16466-PA 655 GL16466-PA 257..530 615..899 548 38.9 Plus
Dper\GL26524-PA 790 GL26524-PA 490..788 613..914 480 36 Plus
Dper\GL16466-PA 655 GL16466-PA 3..269 78..368 415 32.9 Plus
Dper\GL26524-PA 790 GL26524-PA 187..428 9..310 319 30.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 21:17:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11022-PA 814 GA11022-PA 176..814 263..916 2629 83.6 Plus
Dpse\GA11022-PA 814 GA11022-PA 1..176 1..172 753 95.5 Plus
Dpse\GA14649-PA 655 GA14649-PA 257..530 615..899 551 39.3 Plus
Dpse\GA17385-PA 790 GA17385-PA 490..788 613..914 480 36 Plus
Dpse\GA14649-PA 655 GA14649-PA 3..269 78..368 414 32.9 Plus
Dpse\GA17385-PA 790 GA17385-PA 187..428 9..310 319 30.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 21:17:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12636-PA 857 GM12636-PA 1..855 1..868 4329 95.5 Plus
Dsec\GM12634-PA 640 GM12634-PA 257..530 615..899 540 38.9 Plus
Dsec\GM18157-PA 781 GM18157-PA 481..779 613..914 475 35.4 Plus
Dsec\GM12634-PA 640 GM12634-PA 3..232 78..328 421 36.4 Plus
Dsec\GM18157-PA 781 GM18157-PA 180..410 9..300 310 30.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 21:17:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16249-PA 640 GD16249-PA 257..530 615..899 541 38.9 Plus
Dsim\GD22768-PA 810 GD22768-PA 510..808 613..914 475 35.7 Plus
Dsim\GD16249-PA 640 GD16249-PA 3..232 78..328 423 36.4 Plus
Dsim\GD22768-PA 810 GD22768-PA 200..437 2..300 309 29.9 Plus
Dsim\GD16252-PA 63 GD16252-PA 1..58 1..58 309 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 21:17:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19243-PA 894 GJ19243-PA 1..894 1..916 3895 86.1 Plus
Dvir\GJ19240-PA 682 GJ19240-PA 257..545 615..914 590 40.3 Plus
Dvir\GJ19240-PA 682 GJ19240-PA 3..232 78..328 408 35.4 Plus
Dvir\GJ18415-PA 796 GJ18415-PA 511..786 613..891 391 33.9 Plus
Dvir\GJ18415-PA 796 GJ18415-PA 201..449 9..319 341 30.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 21:17:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19850-PA 902 GK19850-PA 1..900 1..916 3698 83.7 Plus
Dwil\GK19845-PA 646 GK19845-PA 262..536 615..899 547 38.9 Plus
Dwil\GK25633-PA 801 GK25633-PA 470..799 575..914 478 33.3 Plus
Dwil\GK19845-PA 646 GK19845-PA 3..261 78..343 408 34 Plus
Dwil\GK25633-PA 801 GK25633-PA 254..483 66..334 333 30.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 21:17:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16806-PA 442 GE16806-PA 8..442 480..916 2275 98.4 Plus
Dyak\GE16805-PA 420 GE16805-PA 1..398 1..398 2105 98 Plus
Dyak\GE16803-PA 649 GE16803-PA 258..531 615..899 545 39.3 Plus
Dyak\GE14916-PA 797 GE14916-PA 497..795 613..914 478 35.4 Plus
Dyak\GE16803-PA 649 GE16803-PA 3..233 78..328 414 35.3 Plus
Dyak\GE14916-PA 797 GE14916-PA 198..428 9..300 314 30.6 Plus

RE56564.hyp Sequence

Translation from 240 to 2990

> RE56564.hyp
MGGGEVKVATVDVEGGDNMATLPVSRSHTAGSTDSAEKNNAANKEMELKN
VMPQPLQRTSLFIVTSLVYAILLIVVCIAYVISDVTTHRLPVLYYETFFT
YLYGVSILFLLYVFCFLLQESSCCNGGNGGSKPKPQPKEKKSKKAKNADP
ADSKDAKGSKDSGKAAKGAAYQEAPVDAEVAVTPKNVRKRKTTHSDLTHG
SFFLRVGAIAFGLGAMIYIGLEFGSFFEIPFDSPCHHILIGVNPLLQMIF
TFMQMYFIFMNARLNIHRFKVIARFGLMHVVATNICVWIRTLVKESLLEI
TIYHQKNEPEAGASSIAHSIRQHALRHAGTVLRTHAGPNSEFEVLDGEDI
LPKDVYKSDNVLSKLVRNTVDGISKSLGMGGDQALDSSTTSSSTTTTTRA
PFTTPNYQWHSTTMARKLKKFITSATTAATTAAGSSSTASSTTTISPTIS
STTIPSTTISSTTISSSTTFSPFSPSTTTTTTTTAAALNLETSGSESPFG
GLQRILSSAAPPSLAPVDGFGSASAATPTSGSGAGSFVDSFLASTLSPAS
STEGSASIMNNLFGQGPMENSFQTYTDLGHEEATGLVSFENLESLDNIYP
AALSSNIGTLNSTACGRIDIMGTIVYDSAPYLYPFIIEYSLIGAVVLYVM
WKHIGRYPGRMNDEDLEHRLEVMLSRRAVAMAQQARSGRVDCVGSSKGLF
FGLLLLVGALICLILFFVLVRHQQFSLLAIYLADASHCILMAFAILAIIV
GFIRVKNLKFRCEEQSNLNDILLRISAFGLFTYSVFSIIAGSLKVLESEP
SLLVTTTGGVAVFQVILQLLFIADVSRRRVHLPEHDRSKPGRQIVTFLLI
CNVAMFAIYTFEAQKVFANPVQLEFYGFVPWSIIQRITLPLCIFHRFHSA
VTLAEIWKTTYKARLE*

RE56564.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:26:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG42492-PA 916 CG42492-PA 1..916 1..916 4648 100 Plus
CG42492-PC 991 CG42492-PC 127..991 59..916 4336 99.2 Plus
CG42492-PD 977 CG42492-PD 95..977 51..916 4325 97.6 Plus
CG42492-PG 958 CG42492-PG 89..958 58..916 4323 98.6 Plus
CG42492-PE 979 CG42492-PE 111..979 59..916 4321 98.7 Plus