BDGP Sequence Production Resources |
Search the DGRC for RE56765
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 567 |
Well: | 65 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG13599-RA |
Protein status: | RE56765.pep: gold |
Preliminary Size: | 888 |
Sequenced Size: | 1062 |
Gene | Date | Evidence |
---|---|---|
CG13599 | 2002-10-09 | Blastp of sequenced clone |
CG13599 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13599 | 2008-04-29 | Release 5.5 accounting |
CG13599 | 2008-08-15 | Release 5.9 accounting |
CG13599 | 2008-12-18 | 5.12 accounting |
1062 bp (1062 high quality bases) assembled on 2002-10-09
GenBank Submission: BT001683
> RE56765.complete TGGGTCTGGCAACGTTTGCAATTAGTGCGAAAAGAGCATTTGTTTAAATT TGTTATATTGCGACCTTTTAATGGATCAAAATGTCAAGAATGTTGATCTT AAACTGGATAACATTGAGGTTCTGACCAGTGGGACAACAGCGGAGTTCGT GAATGGCATCCTGGACTTCTTGCTCTATCAACGCCGGCAAATCCCCTTCG TGTACAAAACATACAAATATTATGTGGATAAATGGTCAGATGCTGATGAA TCGGGAGAATCCAAGGATCAGGAGTCCTTTGCTCATTACCAACGCAACCA GCAGCGCTCTAAGGCAAAGGCCACCAAGGAATCTATTAGTGACATGAGAG AGATCATCCGACAAGCCTTCAGGAGCTCTGAAGTGAAGAGCCTGCGATTT CTTTTTGGCAACAATATGTTCATGCCCTCGGAGGCCTATACTCTGCACAT ACCACATGATTCCATATCCAGAGATCACTATTGCGAGCACCATGCTCTGC CCGAAGGTCGCATCAACCAGGCGCTGCTCCGCCTGCTCACCTGCGAGGAG CTGTACAGGCTATTCTCCACCGAACTAAAAGTCACCAACGTGTTTCTAGA AATGGAGCTCCTTACAGACTCCGATCGACCCCAAGGATCCCATTGTGACT CCTTTAATCTAATCCCAAAGCATATATTAAGCCAACTTCCGCGCAGCTGC AAGAACATACACCTGCATCTACTGCATTGCAGTGAAAACACACCGAATGA ATTACGCTGCTGCAAGGAGATGGATATTTACCACGATCTTGGCGTGCGGA ATCTGGATAAATCTGGGGAAGACGTTAGCCAGACCAACGAAGAGCATGAC GTTTTGAAAGCAGCAAATGAAACCAGCGGTTGGTGGCAGGCCGAGGTCAT AGTTCGCGGTTTCAGAGCTCCTGGCAACCAAAAATCGGGAGATTTGTGGT CTAGCTAACATTTTATAACTTGGATTCTTGCTATTCGGCGTGTTTTGTGT CAAAAATAAAGTTTCGAATCGTTTATAAAAAAAAAAAAAAAAAAAGAAAA AAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13599-RA | 1051 | CG13599-RA | 30..1051 | 4..1026 | 5075 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 19755090..19755441 | 1..352 | 98 | -> | Plus |
chr3R | 19755502..19756174 | 353..1026 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13599-RA | 1..888 | 71..958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13599-RA | 1..888 | 71..958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13599-RA | 1..888 | 71..958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13599-RA | 1..888 | 71..958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13599-RA | 1..888 | 71..958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13599-RA | 1..1025 | 1..1026 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13599-RA | 1..1025 | 1..1026 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13599-RA | 5..1029 | 1..1026 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13599-RA | 1..1025 | 1..1026 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13599-RA | 5..1029 | 1..1026 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23931643..23931994 | 1..352 | 99 | -> | Plus |
3R | 23932056..23932728 | 353..1026 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23931643..23931994 | 1..352 | 99 | -> | Plus |
3R | 23932056..23932728 | 353..1026 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23931643..23931994 | 1..352 | 99 | -> | Plus |
3R | 23932056..23932728 | 353..1026 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 19757365..19757716 | 1..352 | 99 | -> | Plus |
arm_3R | 19757778..19758450 | 353..1026 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23672474..23672825 | 1..352 | 99 | -> | Plus |
3R | 23672887..23673559 | 353..1026 | 99 | Plus |
Translation from 70 to 957
> RE56765.pep MDQNVKNVDLKLDNIEVLTSGTTAEFVNGILDFLLYQRRQIPFVYKTYKY YVDKWSDADESGESKDQESFAHYQRNQQRSKAKATKESISDMREIIRQAF RSSEVKSLRFLFGNNMFMPSEAYTLHIPHDSISRDHYCEHHALPEGRINQ ALLRLLTCEELYRLFSTELKVTNVFLEMELLTDSDRPQGSHCDSFNLIPK HILSQLPRSCKNIHLHLLHCSENTPNELRCCKEMDIYHDLGVRNLDKSGE DVSQTNEEHDVLKAANETSGWWQAEVIVRGFRAPGNQKSGDLWSS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17978-PA | 289 | GF17978-PA | 1..289 | 1..295 | 1115 | 68.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11237-PA | 290 | GG11237-PA | 1..290 | 1..295 | 1374 | 86.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21185-PA | 279 | GH21185-PA | 1..279 | 1..295 | 847 | 55.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13599-PA | 295 | CG13599-PA | 1..295 | 1..295 | 1566 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10481-PA | 278 | GI10481-PA | 1..277 | 1..294 | 869 | 58.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23380-PA | 287 | GL23380-PA | 1..287 | 1..295 | 987 | 64.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12392-PA | 287 | GA12392-PA | 1..287 | 1..295 | 979 | 63.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26538-PA | 291 | GM26538-PA | 1..291 | 1..295 | 1457 | 91.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21046-PA | 295 | GD21046-PA | 1..295 | 1..295 | 1530 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23162-PA | 280 | GJ23162-PA | 1..280 | 1..295 | 853 | 56.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22653-PA | 275 | GK22653-PA | 1..275 | 1..295 | 770 | 54.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23429-PA | 295 | GE23429-PA | 1..295 | 1..295 | 1467 | 90.5 | Plus |
Translation from 70 to 957
> RE56765.hyp MDQNVKNVDLKLDNIEVLTSGTTAEFVNGILDFLLYQRRQIPFVYKTYKY YVDKWSDADESGESKDQESFAHYQRNQQRSKAKATKESISDMREIIRQAF RSSEVKSLRFLFGNNMFMPSEAYTLHIPHDSISRDHYCEHHALPEGRINQ ALLRLLTCEELYRLFSTELKVTNVFLEMELLTDSDRPQGSHCDSFNLIPK HILSQLPRSCKNIHLHLLHCSENTPNELRCCKEMDIYHDLGVRNLDKSGE DVSQTNEEHDVLKAANETSGWWQAEVIVRGFRAPGNQKSGDLWSS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13599-PA | 295 | CG13599-PA | 1..295 | 1..295 | 1566 | 100 | Plus |