Clone RE56844 Report

Search the DGRC for RE56844

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:568
Well:44
Vector:pFlc-1
Associated Gene/TranscriptPde1c-RC
Protein status:RE56844.pep: gold
Preliminary Size:1818
Sequenced Size:3802

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14940 2002-01-01 Sim4 clustering to Release 2
CG14940 2002-05-23 Blastp of sequenced clone
CG14940 2003-01-01 Sim4 clustering to Release 3
Pde1c 2008-04-29 Release 5.5 accounting
Pde1c 2008-08-15 Release 5.9 accounting
Pde1c 2008-12-18 5.12 accounting

Clone Sequence Records

RE56844.complete Sequence

3802 bp (3802 high quality bases) assembled on 2002-05-23

GenBank Submission: AY118396

> RE56844.complete
GTTTAAATTTAACTCGCAACGGGCCAAGTACACAAAAATTCCACCAACGA
GCGGCAACAAGAAAGAATATTCGAAAAGAGAAAAAAAGTAGACGAAATAC
CCGAAAAAAAAACGTGCTGCACAAATATTTGCTATTCCGCCGTCATTAAA
AGCGCATTTTGCTTTTCGGGCCAGCTAATTACGAGAGTGAAGTGGCAGTG
AAATTTGTCGGCCTAATAGAGCAGAGCACCCCCATCCCCTAACCACGGAA
AATGTCCAAGTGAAAGTGATGTATTAAATTAATCGAGTGCCAAAAAAGCG
GGCACGACATTGCCACAAAGTCAACCTCCAGCTGAATTCCATGTACGAAC
CGGGTACGAGCAGCGAGGAGGGTGTTGTATCTGAGACTGAGCCCGAGCCA
GCAGGAGTATCTGTATCTGTATCTGTATCTGTATCTGAGGAGCCATCGGC
GAGCCGCTCCAGCCGGCTGACCGTCATTACCGTGGTCGTGGTCGTCGTCG
CCGTTCGCGCCATGAGTCGTCTGAGGCGTGAAAGCAGCCGACAAAGCGTC
ATCACCGTCGAGCTGATACAGTTCATCATTCAGTATCGCGCCAAGGAGAC
GCAGGAGAAGAAGAAAAGGCGCCTGGCCGACGAGGACGATGAGCTGTCGG
AGGTGCAGCCGGATGCAGTGCCGCCGGAGGTGCGCGAGTGGCTGGCCTCC
ACCTTCACCCGCCAGATGGCCACCAGCCGGCGCAAGAGCGACGAGAAGCC
CAAGTTCCGTTCGGTGGCCCACGCCATCCGTGCTGGCATCTTTGTGGACC
GCATGTATCGCCGCGTCTCCAGCTCGGCCCTAACGGCCTTCCCACCGGAC
GTGGTCAGGCTGCTCAAGAACCTGGACGACTGGACCTTCGATGTGTTCGC
CCTGACGGAGGCAGCCAGCGGCCAGGTGGTCAAGTACGTGGCCTATGAGC
TCTTCAACCGCTACGGCTCGATTCACAAGTTCAAGATTGCGCCGGGAATT
CTGGAGGCGTTCCTGCATCGCGTGGAGGAGGGCTACTGCCGGTATCGGAA
TCCGTATCATAACAATCTGCACGCCGTGGACGTGATGCAGACGATCCACT
ACTGCCTGTGCAACACGGGTCTGATGAACTGGCTGACGGACCTGGAGATC
TTTGCCTCGCTGCTGGCCGCCCTGCTCCACGATTACGAGCACACCGGCAC
CACCAATAACTTCCATGTGATGTCCGGTTCGGAGACGGCACTGCTGTACA
ACGATCGGGCTGTGCTGGAGAATCATCATGCCAGCGCCAGTTTCCGGCTG
CTGCGCGAGGATGAGTACAACATACTGTCGCATTTGTCGCGCGAGGAGTT
CCGCGAATTGCGCGGCCTGGTTATCGAAATGGTACTCGGCACCGATATGA
CCAATCACTTTCAGCAGATGAAGGCCATGCGACAGCTGCTGACGCTCCAG
GAGGCGACCATTGACAAGCAGAAGGTGCTGTCCCTGGTTCTCCACTGCTG
CGACATCTCGCATCCGGCCAAGCAGTGGGGCGTCCATCATCGCTGGACGA
TGCTACTGCTGGAGGAGTTCTTCCGCCAGGGTGACCTCGAGAAGGAGCTG
GGTTTGCCCTTCAGTCCGCTGTGTGATCGCAACAATACGCTGGTGGCCGA
GTCTCAGATCTGTTTCATCGATTTCATCGTGGAGCCCAGCATGGGCGTCA
TGTCCGACATGCTGGAGCTCATACTGGCGCCAATTGCGCCGATGAACAAG
TCCAAGCCCGCCACTCTGGTGGAGCACGAGACGACCGCTAACTCCACGAC
AAACTCGGCGATCGTCATACCCAATTCGGGAATCACGCCCAGCATGGACA
AGCCACGGGATCATCGCACCGAGGCCAAGACCACCGCCGCCGAGTGCCTC
GCACGCAAGAGTGTCACCGGCACCACCGCCTCCAAGTTCAACATACCCAA
GCCGTGGCTCACCTGTCTGGTGGAGAACAAGCGGATATGGAAGGAGCAGG
CCGTCAAAGATGCCGAGGCTCGGGCTTTGGCCACCGCAGCGGAGGAAGCT
GCAGCTGCAGCGGCGGCGGAAGCGGAGGAAAGCAAGCCGGAAACGGAAAC
GGCCGATGGCGAGCAGAGTGAGCCAGCTGCGGAGCCGGCAGATGGCGCTG
CGGCCTAAGGGGACAATTGCGCCACCTGGCGGCCAGCGGCCAACTGAATC
GGAAAACTAATGCGGAAAAACGGAACACAAGAGGAAACTTTGATGGCTAC
ACTGAGAGAAACCGAGGAACGAACGAAGCTGCAAGAATATTGTTTACTAA
GCTTAGAATCAGCCTAGAATTATTGATAACAAAACGCTTCAAATGCGCTC
TCTATGTGAATTGTGGTAGAGTTAGAATAAACGTACATCATCTATACGCA
TAGGTACATTAATATCGATATATATGTATAAATACTGTTTACTTTGTTGT
TGCAAAAGGAAGAAGCAAATTGATAAATATGAAAATATTAGGGCCAAGCA
CAAATACAAACGAACAGTGGAGAAAAAAAGAACGCGTAGATGTAAATAGC
AAAGGAGTTCAACTGAAATTTGTTGTGAATTTGTTAGTTCGTTGCGAGCA
TTTATATTTAGAATTCAGTTGTACTTGTGTTGTACTTGATTAGTTTTAGT
CAAATGTGGAATTTATCGTATGATTTGTCTAAGTTCGATGTACGCAATAT
CGTTTCTAATTAAATACATATATATTTTTGTAATCGTTTCTACCTTTTAT
TTTTGCCCTTAGTTTTTTGTGTGTTTGCATTTACCAAGCATTCGAATTGC
TCAATTAAACGAGTGGTTTTTCAAGAAAGGAACGACAGACGCGTCGATCT
GTCTAGATATTAAGTACCTAACTAAAAGCTAAACCAAAAAATACCTGACA
ACTAGCTATACGACTTGTATATACTCTACACCAACCCCTAACAGACTTTC
CCCACAAGAAAAAGAAAAACCAAAAATCCAAGAAGAAGGCAAAGATTTCA
AAAACTTTCCACTCTACAAATGCACATAGCTACCTATACGATGGGATATA
TAATATTTATTGTTAAGAATATAATAGTCACGTTTCTACAAAACATATTT
ATTTTTATACATGAGCGCGGGACAAAAGTGAGAGCAGAAAGTGGAGGGCT
TGAGTCGCAGGAGGATTTGATTTCCTTTCGTTTCGGTTTTCCTTTTCCTT
AATCAACTTGAAATGTTTTCAAACGTTTTTCAAAATGTCTGATAGCGGGA
CCATTCTTTTAAGATTTACCACTGCTCTTTACCAATTTGAGCAGGGCGAA
AATCGTAGGGAAATTCGAGGTGGAAAAGCCGCCGAGCGATAGCAGCAGAA
AGTCAAAGGGCAGTGGTAAAAGTGCTTAGCAGTAAGGTACCAAATTATCA
GCTGAAATTGGGATCATAGCTTTATTAAGGTAGTCGATAAATGTACGAAC
AAATCGTGGTTGCAGATGTGTATAGCGGATGTCTACTAGTAGCCATAGCC
ACAAATTAAAAACAAACACGAACAGAACAGACAGAACAAACAAACGTACA
CAGCAGATTAATCTACTCCTAAACATTAATGGGATAAATATAGCGCCAGA
ATACCTATTATGCGGACCGTAAATATTATTGAACAACCAGTGTATGTTAG
TGTATATCAAACTTGAACGCTCAAAGCGATGCGCATGCATATATCGTATA
TATACATATATATATATATAGCGACCTCTCTCGAAAATCTGTACAAAGTC
CTGATTAATATAGCGTTAGGCTGCAGACCCTCGAACAAAAAAAAAAAAAA
AA

RE56844.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:58:42
Subject Length Description Subject Range Query Range Score Percent Strand
Pde1c-RC 3893 Pde1c-RC 4..3805 1..3802 18980 99.9 Plus
Pde1c.i 4359 Pde1c.i 284..4085 1..3802 18980 99.9 Plus
Pde1c.e 4557 Pde1c.e 2..3803 1..3802 18980 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 20:20:42
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 11813575..11815353 3786..2008 8895 100 Minus
chr2L 23010047 chr2L 11815998..11817140 2009..867 5700 99.9 Minus
chr2L 23010047 chr2L 11819660..11820278 619..1 3095 100 Minus
chr2L 23010047 chr2L 11817245..11817496 868..617 1260 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:04:49 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 20:20:40
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11814914..11816708 3802..2008 8960 99.9 Minus
2L 23513712 2L 11817353..11818495 2009..867 5700 99.9 Minus
2L 23513712 2L 11821006..11821624 619..1 3095 100 Minus
2L 23513712 2L 11818600..11818851 868..617 1260 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:30:46
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11814914..11816708 3802..2008 8960 99.9 Minus
2L 23513712 2L 11817353..11818495 2009..867 5700 99.9 Minus
2L 23513712 2L 11821006..11821624 619..1 3095 100 Minus
2L 23513712 2L 11818600..11818851 868..617 1260 100 Minus
Blast to na_te.dros performed 2019-03-16 20:20:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dhet\Uhu 1658 Dhet\Uhu DHUHUH3 1658bp AKA(S51651) Derived from X63028 (Rel. 36, Last updated, Version 7). 84..150 3474..3407 139 69.1 Minus

RE56844.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 20:21:44 Download gff for RE56844.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 11813575..11815351 2010..3786 100 <- Minus
chr2L 11815998..11817138 869..2009 99 <- Minus
chr2L 11817245..11817494 619..868 100 <- Minus
chr2L 11819661..11820278 1..618 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:25:12 Download gff for RE56844.complete
Subject Subject Range Query Range Percent Splice Strand
Pde1c-RC 1..1818 341..2158 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:38:06 Download gff for RE56844.complete
Subject Subject Range Query Range Percent Splice Strand
Pde1c-RC 1..1818 341..2158 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:53:43 Download gff for RE56844.complete
Subject Subject Range Query Range Percent Splice Strand
Pde1c-RC 1..1818 341..2158 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:29:47 Download gff for RE56844.complete
Subject Subject Range Query Range Percent Splice Strand
Pde1c-RC 1..1818 341..2158 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:59:33 Download gff for RE56844.complete
Subject Subject Range Query Range Percent Splice Strand
Pde1c-RC 1..1818 341..2158 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:10:50 Download gff for RE56844.complete
Subject Subject Range Query Range Percent Splice Strand
Pde1c-RC 2..3787 1..3786 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:38:06 Download gff for RE56844.complete
Subject Subject Range Query Range Percent Splice Strand
Pde1c-RC 2..3787 1..3786 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:53:43 Download gff for RE56844.complete
Subject Subject Range Query Range Percent Splice Strand
Pde1c-RC 2..3787 1..3786 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:29:48 Download gff for RE56844.complete
Subject Subject Range Query Range Percent Splice Strand
Pde1c-RC 2..3787 1..3786 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:59:33 Download gff for RE56844.complete
Subject Subject Range Query Range Percent Splice Strand
Pde1c-RC 2..3787 1..3786 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:21:44 Download gff for RE56844.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11818600..11818849 619..868 100 <- Minus
2L 11814930..11816706 2010..3786 100 <- Minus
2L 11817353..11818493 869..2009 99 <- Minus
2L 11821007..11821624 1..618 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:21:44 Download gff for RE56844.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11818600..11818849 619..868 100 <- Minus
2L 11814930..11816706 2010..3786 100 <- Minus
2L 11817353..11818493 869..2009 99 <- Minus
2L 11821007..11821624 1..618 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:21:44 Download gff for RE56844.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11818600..11818849 619..868 100 <- Minus
2L 11814930..11816706 2010..3786 100 <- Minus
2L 11817353..11818493 869..2009 99 <- Minus
2L 11821007..11821624 1..618 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:53:43 Download gff for RE56844.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11814930..11816706 2010..3786 100 <- Minus
arm_2L 11817353..11818493 869..2009 99 <- Minus
arm_2L 11818600..11818849 619..868 100 <- Minus
arm_2L 11821007..11821624 1..618 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:02:21 Download gff for RE56844.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11814930..11816706 2010..3786 100 <- Minus
2L 11817353..11818493 869..2009 99 <- Minus
2L 11818600..11818849 619..868 100 <- Minus
2L 11821007..11821624 1..618 100   Minus

RE56844.pep Sequence

Translation from 340 to 2157

> RE56844.pep
MYEPGTSSEEGVVSETEPEPAGVSVSVSVSVSEEPSASRSSRLTVITVVV
VVVAVRAMSRLRRESSRQSVITVELIQFIIQYRAKETQEKKKRRLADEDD
ELSEVQPDAVPPEVREWLASTFTRQMATSRRKSDEKPKFRSVAHAIRAGI
FVDRMYRRVSSSALTAFPPDVVRLLKNLDDWTFDVFALTEAASGQVVKYV
AYELFNRYGSIHKFKIAPGILEAFLHRVEEGYCRYRNPYHNNLHAVDVMQ
TIHYCLCNTGLMNWLTDLEIFASLLAALLHDYEHTGTTNNFHVMSGSETA
LLYNDRAVLENHHASASFRLLREDEYNILSHLSREEFRELRGLVIEMVLG
TDMTNHFQQMKAMRQLLTLQEATIDKQKVLSLVLHCCDISHPAKQWGVHH
RWTMLLLEEFFRQGDLEKELGLPFSPLCDRNNTLVAESQICFIDFIVEPS
MGVMSDMLELILAPIAPMNKSKPATLVEHETTANSTTNSAIVIPNSGITP
SMDKPRDHRTEAKTTAAECLARKSVTGTTASKFNIPKPWLTCLVENKRIW
KEQAVKDAEARALATAAEEAAAAAAAEAEESKPETETADGEQSEPAAEPA
DGAAA*

RE56844.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 03:39:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23391-PA 606 GF23391-PA 6..546 4..557 2476 85 Plus
Dana\GF19605-PA 999 GF19605-PA 594..887 174..458 560 36.9 Plus
Dana\GF13070-PA 926 GF13070-PA 582..888 169..461 384 32 Plus
Dana\GF20888-PA 889 GF20888-PA 4..330 204..516 351 29.5 Plus
Dana\GF17478-PA 1158 GF17478-PA 689..972 177..461 329 32 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 03:39:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10295-PA 601 GG10295-PA 1..591 1..595 2794 92 Plus
Dere\GG18654-PA 662 GG18654-PA 259..552 174..458 555 36.9 Plus
Dere\GG22873-PA 905 GG22873-PA 561..867 169..461 390 32.5 Plus
Dere\GG19538-PA 984 GG19538-PA 60..385 183..498 359 29.8 Plus
Dere\GG21262-PA 1131 GG21262-PA 674..957 177..461 325 32 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 03:39:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13071-PA 517 GH13071-PA 1..516 58..598 2191 77.5 Plus
Dgri\GH24693-PA 811 GH24693-PA 418..711 174..458 561 36.6 Plus
Dgri\GH20665-PA 921 GH20665-PA 576..881 169..461 377 32.2 Plus
Dgri\GH24569-PA 971 GH24569-PA 49..374 183..498 347 30.1 Plus
Dgri\GH14135-PA 1078 GH14135-PA 613..896 177..461 315 32.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:36:19
Subject Length Description Subject Range Query Range Score Percent Strand
Pde1c-PC 605 CG44007-PC 1..605 1..605 3090 100 Plus
Pde1c-PH 952 CG44007-PH 400..952 54..605 2666 94.2 Plus
Pde1c-PL 855 CG44007-PL 342..855 92..605 2659 99.8 Plus
Pde1c-PJ 1158 CG44007-PJ 645..1158 92..605 2659 99.8 Plus
Pde1c-PG 834 CG44007-PG 321..834 92..605 2659 99.8 Plus
Pde1c-PD 1137 CG44007-PD 624..1137 92..605 2659 99.8 Plus
Pde1c-PE 1173 CG44007-PE 660..1173 92..605 2659 99.8 Plus
Pde1c-PB 834 CG44007-PB 321..834 92..605 2659 99.8 Plus
Pde1c-PK 1009 CG44007-PK 494..1009 90..605 2657 99.2 Plus
dnc-PL 521 CG32498-PL 118..411 174..458 536 36.6 Plus
dnc-PP 642 CG32498-PP 239..532 174..458 536 36.6 Plus
dnc-PE 642 CG32498-PE 239..532 174..458 536 36.6 Plus
dnc-PF 662 CG32498-PF 259..552 174..458 536 36.6 Plus
dnc-PA 701 CG32498-PA 298..591 174..458 536 36.6 Plus
dnc-PR 703 CG32498-PR 300..593 174..458 536 36.6 Plus
dnc-PQ 703 CG32498-PQ 300..593 174..458 536 36.6 Plus
dnc-PU 715 CG32498-PU 312..605 174..458 536 36.6 Plus
dnc-PT 715 CG32498-PT 312..605 174..458 536 36.6 Plus
dnc-PG 814 CG32498-PG 411..704 174..458 536 36.6 Plus
dnc-PN 983 CG32498-PN 580..873 174..458 536 36.6 Plus
dnc-PC 1057 CG32498-PC 654..947 174..458 536 36.6 Plus
dnc-PD 1068 CG32498-PD 665..958 174..458 536 36.6 Plus
dnc-PJ 1070 CG32498-PJ 667..960 174..458 536 36.6 Plus
dnc-PI 1070 CG32498-PI 667..960 174..458 536 36.6 Plus
dnc-PS 1209 CG32498-PS 806..1099 174..458 536 36.6 Plus
dnc-PB 1209 CG32498-PB 806..1099 174..458 536 36.6 Plus
Pde8-PD 805 CG45019-PD 405..763 101..460 403 28.8 Plus
Pde8-PB 904 CG45019-PB 504..862 101..460 403 28.8 Plus
Pde8-PE 905 CG45019-PE 505..863 101..460 403 28.8 Plus
Pde8-PK 914 CG45019-PK 514..872 101..460 403 28.8 Plus
Pde8-PI 914 CG45019-PI 514..872 101..460 403 28.8 Plus
Pde8-PA 914 CG45019-PA 514..872 101..460 403 28.8 Plus
Pde8-PN 949 CG45019-PN 514..872 101..460 403 28.8 Plus
Pde8-PO 1050 CG45019-PO 650..1008 101..460 403 28.8 Plus
Pde8-PC 400 CG45019-PC 56..358 169..460 401 31.6 Plus
Pde9-PB 1526 CG42276-PB 699..1014 197..498 357 29.2 Plus
Pde9-PF 1526 CG42276-PF 699..1014 197..498 357 29.2 Plus
Pde9-PE 1526 CG42276-PE 699..1014 197..498 357 29.2 Plus
Pde9-PD 1623 CG42276-PD 699..1014 197..498 357 29.2 Plus
Pde6-PD 1118 CG8279-PD 661..939 177..456 317 31.7 Plus
Pde6-PB 1118 CG8279-PB 661..939 177..456 317 31.7 Plus
Pde6-PC 1124 CG8279-PC 661..939 177..456 317 31.7 Plus
Pde11-PE 1117 CG34341-PE 789..1043 211..459 247 28.5 Plus
Pde11-PD 1161 CG34341-PD 833..1087 211..459 247 28.5 Plus
Pde11-PG 1407 CG34341-PG 789..1043 211..459 247 28.5 Plus
Pde11-PC 1407 CG34341-PC 789..1043 211..459 247 28.5 Plus
Pde11-PF 1451 CG34341-PF 833..1087 211..459 247 28.5 Plus
Pde11-PB 1451 CG34341-PB 833..1087 211..459 247 28.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 03:39:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17690-PA 572 GI17690-PA 33..559 34..592 2142 75.1 Plus
Dmoj\GI19028-PA 952 GI19028-PA 608..913 169..461 388 32 Plus
Dmoj\GI11066-PA 1039 GI11066-PA 56..338 183..465 343 31.1 Plus
Dmoj\GI10668-PA 1116 GI10668-PA 660..943 177..461 324 32.3 Plus
Dmoj\GI11177-PA 818 GI11177-PA 586..705 340..449 266 40 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 03:40:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15274-PA 589 GL15274-PA 1..542 1..561 2374 80.4 Plus
Dper\GL19963-PA 342 GL19963-PA 2..228 242..458 454 39.2 Plus
Dper\GL16875-PA 1333 GL16875-PA 989..1295 169..461 393 32.7 Plus
Dper\GL22965-PA 1036 GL22965-PA 95..377 183..465 353 31.5 Plus
Dper\GL18744-PA 1050 GL18744-PA 584..841 211..462 246 27.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 03:40:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13368-PA 538 GA13368-PA 1..491 58..561 2345 85.8 Plus
Dpse\GA28567-PA 624 GA28567-PA 220..513 174..458 555 36.6 Plus
Dpse\GA18863-PC 918 GA18863-PC 574..880 169..461 390 32.7 Plus
Dpse\GA18863-PB 928 GA18863-PB 584..890 169..461 388 32.7 Plus
Dpse\GA18863-PD 400 GA18863-PD 56..358 169..460 385 31.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 03:40:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10946-PA 605 GM10946-PA 1..604 1..604 3206 99 Plus
Dsec\GM19267-PA 1204 GM19267-PA 801..1094 174..458 564 36.9 Plus
Dsec\GM16033-PA 914 GM16033-PA 570..876 169..461 387 32.9 Plus
Dsec\GM11531-PA 968 GM11531-PA 60..385 183..498 361 29.8 Plus
Dsec\GM17084-PA 1366 GM17084-PA 744..998 211..459 242 28.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 03:40:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22155-PA 603 GD22155-PA 1..603 1..605 3197 98.7 Plus
Dsim\GD16638-PA 862 GD16638-PA 553..837 174..449 569 37.8 Plus
Dsim\GD11781-PA 840 GD11781-PA 523..802 196..461 343 32.2 Plus
Dsim\GD20415-PA 1143 GD20415-PA 686..969 177..461 327 32 Plus
Dsim\GD18922-PA 102 GD18922-PA 1..91 1..93 307 94.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 03:40:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17476-PA 513 GJ17476-PA 1..513 58..598 2200 78 Plus
Dvir\GJ15306-PA 649 GJ15306-PA 251..544 174..458 556 36.9 Plus
Dvir\GJ19994-PA 956 GJ19994-PA 612..913 169..460 379 30.8 Plus
Dvir\GJ16925-PA 948 GJ16925-PA 50..397 183..529 363 29.2 Plus
Dvir\GJ23019-PA 893 GJ23019-PA 439..722 177..461 314 32.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 03:40:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14971-PA 593 GK14971-PA 22..579 35..592 2278 79.6 Plus
Dwil\GK10356-PA 1013 GK10356-PA 621..914 174..458 559 36.6 Plus
Dwil\GK23066-PA 924 GK23066-PA 580..885 169..461 376 32.1 Plus
Dwil\GK10275-PA 1547 GK10275-PA 699..1029 183..504 346 30.3 Plus
Dwil\GK11355-PA 1127 GK11355-PA 673..956 177..461 329 32.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 03:40:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12665-PA 615 GE12665-PA 1..615 1..605 3071 94.7 Plus
Dyak\GE16298-PA 1201 GE16298-PA 798..1091 174..458 563 36.9 Plus
Dyak\GE14311-PA 906 GE14311-PA 562..868 169..461 388 32.9 Plus
Dyak\GE26445-PA 1149 GE26445-PA 692..975 177..461 327 32 Plus
Dyak\GE12727-PA 934 GE12727-PA 304..561 211..462 239 27.9 Plus

RE56844.hyp Sequence

Translation from 340 to 2157

> RE56844.hyp
MYEPGTSSEEGVVSETEPEPAGVSVSVSVSVSEEPSASRSSRLTVITVVV
VVVAVRAMSRLRRESSRQSVITVELIQFIIQYRAKETQEKKKRRLADEDD
ELSEVQPDAVPPEVREWLASTFTRQMATSRRKSDEKPKFRSVAHAIRAGI
FVDRMYRRVSSSALTAFPPDVVRLLKNLDDWTFDVFALTEAASGQVVKYV
AYELFNRYGSIHKFKIAPGILEAFLHRVEEGYCRYRNPYHNNLHAVDVMQ
TIHYCLCNTGLMNWLTDLEIFASLLAALLHDYEHTGTTNNFHVMSGSETA
LLYNDRAVLENHHASASFRLLREDEYNILSHLSREEFRELRGLVIEMVLG
TDMTNHFQQMKAMRQLLTLQEATIDKQKVLSLVLHCCDISHPAKQWGVHH
RWTMLLLEEFFRQGDLEKELGLPFSPLCDRNNTLVAESQICFIDFIVEPS
MGVMSDMLELILAPIAPMNKSKPATLVEHETTANSTTNSAIVIPNSGITP
SMDKPRDHRTEAKTTAAECLARKSVTGTTASKFNIPKPWLTCLVENKRIW
KEQAVKDAEARALATAAEEAAAAAAAEAEESKPETETADGEQSEPAAEPA
DGAAA*

RE56844.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:58:17
Subject Length Description Subject Range Query Range Score Percent Strand
Pde1c-PC 605 CG44007-PC 1..605 1..605 3090 100 Plus
Pde1c-PH 952 CG44007-PH 400..952 54..605 2666 94.2 Plus
Pde1c-PL 855 CG44007-PL 342..855 92..605 2659 99.8 Plus
Pde1c-PJ 1158 CG44007-PJ 645..1158 92..605 2659 99.8 Plus
Pde1c-PG 834 CG44007-PG 321..834 92..605 2659 99.8 Plus