Clone RE56857 Report

Gene	Date	Evidence
CG10279	2004-07-14	Blastp of sequenced clone
Rm62	2008-04-29	Release 5.5 accounting
Rm62	2008-08-15	Release 5.9 accounting
Rm62	2008-12-18	5.12 accounting

Clone Sequence Records

RE56857.complete Sequence

2267 bp (2267 high quality bases) assembled on 2004-07-14

GenBank Submission: BT015209

> RE56857.complete
AGGGTCACTCTAATTTTGGACGAGGTTAGCAGCGGCACTTTCGCTTCTTC
TTCTTCGCTCTGCACCGAACAACGACAACAGTTCCACGGGAGTCGCAGGA
ATCGTGAGACAATACTGTTCCCAAGCACATATAGTAGTCTCCAAGCTCAG
TCGCAGCGTGCGTTTCGAGACAGCTCGAAACCAGATTCAGACGACTACGT
AGATTCCATCCCGAAAGCAGAGCAGCGGACGAGGACGAGGAAATCGCTTT
TCAACGATCCCGACGAAAGAACTGAGGAAATCAAAATTGAAGGAGTAATG
GCACCACACGATCGCGACTTTGGTCACAGTGGACGTGGCGGTCGCGGAGG
CGATCGAGGCGGCGATGATCGGCGAGGAGGCGGCGGCGGAGGCAATCGCT
TCGGTGGCGGCGGTGGCGGTGGCGATTACCACGGCATAAGGAATGGACGC
GTCGAGAAGCGACGCGATGACCGCGGAGGCGGCAACCGATTTGGAGGTGG
TGGTGGATTCGGGGATCGCCGAGGAGGAGGTGGCGGCGGCAGCCAAGACC
TCCCCATGCGTCCGGTCGACTTCTCCAACCTGGCTCCCTTCAAGAAGAAC
TTTTACCAGGAGCACCCTAACGTAGCAAACCGATCGCCCTACGAAGTTCA
GAGGTATCGCGAAGAGCAGGAGATCACCGTGCGCGGACAGGTGCCGAACC
CCATCCAGGACTTCTCCGAGGTCCATCTGCCCGACTACGTCATGAAGGAG
ATCCGCCGACAGGGCTACAAGGCCCCCACCGCTATCCAAGCGCAGGGCTG
GCCTATCGCCATGAGTGGCTCGAACTTCGTCGGCATTGCCAAGACGGGAT
CCGGAAAGACCCTGGGCTACATCCTGCCCGCTATTGTCCACATCAACAAC
CAGCAGCCGCTGCAGAGGGGCGACGGACCTATCGCCCTCGTGCTGGCCCC
CACTCGGGAGCTGGCCCAACAGATCCAGCAGGTGGCCACCGAATTCGGTT
CCTCGTCGTATGTTCGCAACACCTGCGTCTTCGGCGGCGCCCCGAAGGGC
GGCCAAATGCGGGATCTGCAGCGCGGCTGCGAGATCGTCATTGCCACACC
CGGACGTCTTATTGATTTCCTCTCCGCCGGCTCTACTAACCTGAAGCGTT
GCACCTACTTGGTGCTGGACGAGGCCGATCGCATGTTAGACATGGGCTTC
GAGCCCCAGATCAGAAAGATCGTCTCACAGATCCGGCCCGACCGACAGAC
GCTCATGTGGAGCGCTACCTGGCCCAAGGAGGTCAAGCAGCTTGCCGAGG
ACTTTTTGGGCAACTACATCCAGATCAACATTGGATCGCTGGAGCTGTCC
GCCAATCACAACATCCGCCAGGTGGTGGACGTTTGTGACGAGTTCAGCAA
GGAGGAGAAATTGAAGACCCTCCTGTCAGACATCTACGACACCAGCGAGA
GCCCCGGCAAGATTATCATATTCGTGGAGACAAAGCGACGCGTGGACAAC
CTGGTGCGCTTCATCCGCAGCTTCGGAGTCCGTTGTGGAGCTATTCACGG
TGACAAGTCGCAATCAGAACGAGACTTTGTGCTCCGTGAGTTCCGCTCGG
GCAAGTCCAACATTCTGGTGGCCACCGATGTGGCGGCCCGTGGACTAGAC
GTGGACGGCATCAAGTATGTCATCAACTTTGACTACCCGCAAAACAGCGA
GGACTACATCCATCGCATCGGTCGCACAGGACGATCCAACACAAAGGGCA
CCTCTTTCGCCTTCTTCACCAAGAACAATGCCAAGCAAGCCAAGGCGCTG
GTCGACGTACTCCGAGAAGCTAATCAGGAAATCAATCCTGCCCTGGAAAA
TCTGGCCCGCAACTCGCGCTACGACGGTGGCGGCGGACGCTCCCGTTATG
GAGGCGGTGGCGGCGGCGGTCGCTTCGGCGGCGGCGGCTTCAAGAAGGGC
AGCCTGAGCAACGGACGAGGCTTCGGAGGAGGCGGCGGCGGCGGCGGCGA
AGGCAGACACTCGCGCTTCGACTAGATCGCGGACAATTAGATGAGCAGTA
AAAGAAGCTATAGGAACAGGAGATTTCAGTAGCTAAACTAAACCGCACTA
GGTCCTAAGTTAAATTAAGTTCATAGCTTAAGTTAAGATTTCGTACTACT
TTCACCAAACCGCTGACGGTTATTTTTAGACTTAAATTCAGACTCCCTGA
TTAATGAAACACTACAAAATGCGAGCTATTTGAACATAGCGAATTTATGT
TTAAAAAAAAAAAAAAA

RE56857.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:00:00

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Rm62-RA	3172	Rm62-RA	395..2622	28..2255	11140	100	Plus
Rm62-RB	3188	Rm62-RB	681..2638	298..2255	9790	100	Plus
Rm62-RE	3236	Rm62-RE	724..2686	293..2255	9785	99.8	Plus
Rm62-RB	3188	Rm62-RB	319..590	28..299	1360	100	Plus
Rm62-RE	3236	Rm62-RE	294..565	28..299	1360	100	Plus
Rm62-RB	3188	Rm62-RB	48..76	1..29	145	100	Plus
Rm62-RE	3236	Rm62-RE	23..51	1..29	145	100	Plus
Rm62-RA	3172	Rm62-RA	124..152	1..29	145	100	Plus

Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:23:57

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chr3R	27901430	chr3R	1829643..1830752	1409..300	5550	100	Minus
chr3R	27901430	chr3R	1826550..1826979	2252..1823	2150	100	Minus
chr3R	27901430	chr3R	1833662..1833934	300..28	1365	100	Minus
chr3R	27901430	chr3R	1829299..1829537	1648..1410	1195	100	Minus
chr3R	27901430	chr3R	1827171..1827353	1828..1646	915	100	Minus
chr3L	24539361	chr3L	6946314..6946919	1392..787	810	75.6	Minus
chrX	22417052	chrX	7820818..7821117	1371..1072	420	76	Minus

Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:04:50 has no hits.

Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:23:56

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
3R	32079331	3R	6004017..6005126	1409..300	5550	100	Minus
3R	32079331	3R	6000933..6001365	2255..1823	2165	100	Minus
3R	32079331	3R	6008036..6008308	300..28	1365	100	Minus
3R	32079331	3R	6003673..6003911	1648..1410	1195	100	Minus
3R	32079331	3R	6001557..6001739	1828..1646	915	100	Minus
3L	28110227	3L	6954023..6954628	1392..787	780	75.2	Minus
X	23542271	X	7928923..7929222	1371..1072	420	76	Minus

Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:48:33

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
3R	31820162	3R	5744848..5745957	1409..300	5550	100	Minus
3R	31820162	3R	5741764..5742196	2255..1823	2165	100	Minus
3R	31820162	3R	5748867..5749139	300..28	1365	100	Minus
3R	31820162	3R	5744504..5744742	1648..1410	1195	100	Minus
3R	31820162	3R	5742388..5742570	1828..1646	915	100	Minus
X	23527363	X	7937021..7937257	1371..1135	390	77.6	Minus
3L	28103327	3L	6947214..6947373	1301..1142	380	82.5	Minus
3L	28103327	3L	6947527..6947677	988..838	260	78.1	Minus
3L	28103327	3L	6947123..6947203	1392..1312	180	81.4	Minus
X	23527363	X	7937421..7937479	977..919	175	86.4	Minus
3R	31820162	3R	5749382..5749410	29..1	145	100	Minus
3L	28103327	3L	6947393..6947454	1122..1061	145	82.2	Minus
X	23527363	X	7936512..7936546	1634..1600	145	94.2	Minus

Blast to na_te.dros performed on 2019-03-16 05:23:56 has no hits.

RE56857.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:24:44 Download gff for RE56857.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chr3R	1829299..1829537	1410..1648	100	<-	Minus
chr3R	1826550..1826974	1828..2252	91	<-	Minus
chr3R	1827172..1827350	1649..1827	100	<-	Minus
chr3R	1829643..1830627	425..1409	100	==	Minus
chr3R	1830718..1830752	300..334	100	<-	Minus
chr3R	1833663..1833932	30..299	100	<-	Minus
chr3R	1834177..1834205	1..29	100		Minus

Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:25:13 Download gff for RE56857.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rm62-RA	163..2160	28..2025	100		Plus

Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:34:32 Download gff for RE56857.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rm62-RA	163..2160	28..2025	100		Plus

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:35:52 Download gff for RE56857.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rm62-RA	163..2160	28..2025	100		Plus

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:18:25 Download gff for RE56857.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rm62-RA	163..2160	28..2025	100		Plus

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:02:14 Download gff for RE56857.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rm62-RA	163..2160	28..2025	100		Plus

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:40:52 Download gff for RE56857.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rm62-RD	1..2252	1..2252	100		Plus

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:34:32 Download gff for RE56857.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rm62-RD	1..2252	1..2252	100		Plus

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:35:52 Download gff for RE56857.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rm62-RD	1..2252	1..2252	100		Plus

Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:18:25 Download gff for RE56857.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rm62-RD	1..2252	1..2252	100		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:02:14 Download gff for RE56857.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Rm62-RD	1..2252	1..2252	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:24:44 Download gff for RE56857.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	6000936..6001360	1828..2252	100	<-	Minus
3R	6001558..6001736	1649..1827	100	<-	Minus
3R	6003673..6003911	1410..1648	100	<-	Minus
3R	6004017..6005126	300..1409	100	<-	Minus
3R	6008037..6008306	30..299	100	<-	Minus
3R	6008551..6008579	1..29	100		Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:24:44 Download gff for RE56857.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	6000936..6001360	1828..2252	100	<-	Minus
3R	6001558..6001736	1649..1827	100	<-	Minus
3R	6003673..6003911	1410..1648	100	<-	Minus
3R	6004017..6005126	300..1409	100	<-	Minus
3R	6008037..6008306	30..299	100	<-	Minus
3R	6008551..6008579	1..29	100		Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:24:44 Download gff for RE56857.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	6000936..6001360	1828..2252	100	<-	Minus
3R	6001558..6001736	1649..1827	100	<-	Minus
3R	6003673..6003911	1410..1648	100	<-	Minus
3R	6004017..6005126	300..1409	100	<-	Minus
3R	6008037..6008306	30..299	100	<-	Minus
3R	6008551..6008579	1..29	100		Minus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:35:52 Download gff for RE56857.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_3R	1826658..1827082	1828..2252	100	<-	Minus
arm_3R	1827280..1827458	1649..1827	100	<-	Minus
arm_3R	1829395..1829633	1410..1648	100	<-	Minus
arm_3R	1829739..1830848	300..1409	100	<-	Minus
arm_3R	1833759..1834028	30..299	100	<-	Minus
arm_3R	1834273..1834301	1..29	100		Minus

Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:55:34 Download gff for RE56857.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	5748868..5749137	30..299	100	<-	Minus
3R	5749382..5749410	1..29	100		Minus
3R	5741767..5742191	1828..2252	100	<-	Minus
3R	5742389..5742567	1649..1827	100	<-	Minus
3R	5744504..5744742	1410..1648	100	<-	Minus
3R	5744848..5745957	300..1409	100	<-	Minus

RE56857.hyp Sequence

Translation from 0 to 2024

> RE56857.hyp
RVTLILDEVSSGTFASSSSLCTEQRQQFHGSRRNRETILFPSTYSSLQAQ
SQRAFRDSSKPDSDDYVDSIPKAEQRTRTRKSLFNDPDERTEEIKIEGVM
APHDRDFGHSGRGGRGGDRGGDDRRGGGGGGNRFGGGGGGGDYHGIRNGR
VEKRRDDRGGGNRFGGGGGFGDRRGGGGGGSQDLPMRPVDFSNLAPFKKN
FYQEHPNVANRSPYEVQRYREEQEITVRGQVPNPIQDFSEVHLPDYVMKE
IRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINN
QQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKG
GQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGF
EPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELS
ANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDN
LVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLD
VDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKAL
VDVLREANQEINPALENLARNSRYDGGGGRSRYGGGGGGGRFGGGGFKKG
SLSNGRGFGGGGGGGGEGRHSRFD*

RE56857.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:18:00

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Rm62-PA	719	CG10279-PA	55..719	10..674	3502	100	Plus
Rm62-PF	578	CG10279-PF	3..578	99..674	3047	99.8	Plus
Rm62-PB	578	CG10279-PB	3..578	99..674	3047	99.8	Plus
Rm62-PC	578	CG10279-PC	3..578	99..674	3047	99.8	Plus
Rm62-PH	575	CG10279-PH	1..575	100..674	3046	100	Plus

RE56857.pep Sequence

Translation from 297 to 2024

> RE56857.pep
MAPHDRDFGHSGRGGRGGDRGGDDRRGGGGGGNRFGGGGGGGDYHGIRNG
RVEKRRDDRGGGNRFGGGGGFGDRRGGGGGGSQDLPMRPVDFSNLAPFKK
NFYQEHPNVANRSPYEVQRYREEQEITVRGQVPNPIQDFSEVHLPDYVMK
EIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHIN
NQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPK
GGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMG
FEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLEL
SANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVD
NLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGL
DVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKA
LVDVLREANQEINPALENLARNSRYDGGGGRSRYGGGGGGGRFGGGGFKK
GSLSNGRGFGGGGGGGGEGRHSRFD*

RE56857.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 19:44:24

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dana\GF18634-PA	704	GF18634-PA	127..704	1..575	2385	89.5	Plus
Dana\GF24750-PA	613	GF24750-PA	64..502	87..523	1754	73.8	Plus
Dana\GF10884-PA	822	GF10884-PA	86..538	71..526	1613	67.4	Plus
Dana\GF20995-PA	996	GF20995-PA	195..642	87..528	1450	60.1	Plus
Dana\GF16725-PA	693	GF16725-PA	209..647	92..520	1018	45.3	Plus

Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 19:44:26

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG10666-PA	720	GG10666-PA	141..720	1..575	2932	97.9	Plus
Dere\GG15018-PA	824	GG15018-PA	84..544	63..526	1615	66.7	Plus
Dere\GG17597-PA	955	GG17597-PA	195..656	92..546	1482	60.6	Plus
Dere\GG23261-PA	709	GG23261-PA	231..695	92..561	957	42	Plus
Dere\GG17877-PA	1222	GG17877-PA	458..889	90..519	892	42.6	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 19:44:28

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH14289-PA	746	GH14289-PA	162..688	1..526	2357	91.9	Plus
Dgri\GH22580-PA	793	GH22580-PA	102..547	94..540	1586	67.4	Plus
Dgri\GH24775-PA	977	GH24775-PA	193..628	92..521	1471	62.2	Plus
Dgri\GH18325-PA	684	GH18325-PA	209..647	92..520	927	43.2	Plus
Dgri\GH17046-PA	811	GH17046-PA	238..726	86..573	887	39.7	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:16:41

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Rm62-PH	575	CG10279-PH	1..575	1..575	3046	100	Plus
Rm62-PF	578	CG10279-PF	4..578	1..575	3046	100	Plus
Rm62-PA	719	CG10279-PA	145..719	1..575	3046	100	Plus
Rm62-PB	578	CG10279-PB	4..578	1..575	3046	100	Plus
Rm62-PD	575	CG10279-PD	1..575	1..575	3046	100	Plus
Rm62-PC	578	CG10279-PC	4..578	1..575	3046	100	Plus
Rm62-PI	578	CG10279-PI	5..578	2..575	3041	100	Plus
Rm62-PE	578	CG10279-PE	5..578	2..575	3041	100	Plus
Rm62-PL	473	CG10279-PL	1..453	1..453	2382	99.6	Plus
Rm62-PK	485	CG10279-PK	1..451	1..451	2380	100	Plus
Rm62-PM	478	CG10279-PM	1..451	1..451	2376	99.8	Plus
Rm62-PJ	458	CG10279-PJ	1..450	1..450	2374	100	Plus
CG10077-PD	818	CG10077-PD	11..604	8..575	1694	59.2	Plus
CG10077-PA	818	CG10077-PA	11..604	8..575	1694	59.2	Plus
mahe-PC	945	CG10777-PC	89..652	15..546	1447	53.2	Plus
mahe-PB	945	CG10777-PB	89..652	15..546	1447	53.2	Plus
CG10077-PC	472	CG10077-PC	11..468	8..450	1372	62.6	Plus
CG7878-PA	703	CG7878-PA	158..690	18..546	1005	41.7	Plus
bel-PA	798	CG9748-PA	117..766	5..567	938	38.1	Plus
bel-PB	801	CG9748-PB	117..749	5..566	938	38.2	Plus
CG6227-PA	1224	CG6227-PA	459..917	90..549	883	41.2	Plus
CG6418-PB	791	CG6418-PB	215..691	86..547	850	40.3	Plus
vas-PC	661	CG46283-PC	90..644	5..542	812	36	Plus
vas-PB	661	CG46283-PB	90..644	5..542	812	36	Plus
vas-PA	661	CG46283-PA	90..644	5..542	812	36	Plus
CG10333-PA	822	CG10333-PA	376..775	120..495	739	39.9	Plus
abs-PA	619	CG14637-PA	148..586	109..539	732	37.9	Plus
CG14443-PB	736	CG14443-PB	280..719	83..525	715	36.3	Plus
eIF4A-PF	403	CG9075-PF	31..398	138..522	547	33.7	Plus
eIF4A-PE	403	CG9075-PE	31..398	138..522	547	33.7	Plus
eIF4A-PD	403	CG9075-PD	31..398	138..522	547	33.7	Plus
eIF4A-PB	403	CG9075-PB	31..398	138..522	547	33.7	Plus
eIF4A-PC	403	CG9075-PC	31..398	138..522	547	33.7	Plus
eIF4A-PA	403	CG9075-PA	31..398	138..522	547	33.7	Plus
Rs1-PB	782	CG2173-PB	73..526	51..512	533	32.8	Plus
Rs1-PA	782	CG2173-PA	73..526	51..512	533	32.8	Plus
CG7483-PA	399	CG7483-PA	25..394	136..522	521	33.3	Plus
CG9253-PA	507	CG9253-PA	81..503	157..551	512	32.9	Plus
me31B-PB	428	CG4916-PB	28..398	138..516	486	32.1	Plus
me31B-PA	459	CG4916-PA	59..429	138..516	486	32.1	Plus
CG32344-PA	827	CG32344-PA	41..389	139..494	447	28.4	Plus
Dbp45A-PA	521	CG12759-PA	9..355	139..490	440	33	Plus
CG8611-PC	828	CG8611-PC	352..769	161..501	431	30	Plus
CG8611-PA	974	CG8611-PA	351..768	161..501	431	30	Plus
CG8611-PB	975	CG8611-PB	352..769	161..501	431	30	Plus
CG5589-PA	594	CG5589-PA	93..488	116..508	427	29.4	Plus
pit-PC	680	CG6375-PC	199..532	149..484	427	30.8	Plus
pit-PA	680	CG6375-PA	199..532	149..484	427	30.8	Plus
pit-PB	680	CG6375-PB	199..532	149..484	427	30.8	Plus
CG5800-PA	826	CG5800-PA	13..452	62..507	417	28.3	Plus
Hlc-PB	560	CG1666-PB	3..393	131..496	399	29.1	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 19:44:29

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI23184-PA	724	GI23184-PA	146..665	1..526	2409	91.1	Plus
Dmoj\GI12524-PA	602	GI12524-PA	28..494	47..522	1783	71.4	Plus
Dmoj\GI12369-PA	794	GI12369-PA	99..543	94..540	1597	67.9	Plus
Dmoj\GI14822-PA	963	GI14822-PA	190..624	92..521	1481	63.2	Plus
Dmoj\GI23306-PA	702	GI23306-PA	134..668	18..520	935	39.8	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 19:44:31

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\GL23489-PA	649	GL23489-PA	148..594	80..526	2285	95.1	Plus
Dper\GL16096-PA	554	GL16096-PA	9..551	45..558	1713	62.7	Plus
Dper\GL13229-PA	455	GL13229-PA	56..453	61..450	1354	67.2	Plus
Dper\GL15249-PA	688	GL15249-PA	1..376	152..522	1319	64.1	Plus
Dper\GL24257-PA	703	GL24257-PA	243..650	92..521	902	41	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 19:44:33

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\GA10214-PA	738	GA10214-PA	150..685	1..526	2315	89	Plus
Dpse\GA28491-PA	537	GA28491-PA	9..534	45..558	1775	65.8	Plus
Dpse\GA28589-PA	799	GA28589-PA	56..523	61..520	1618	66.8	Plus
Dpse\GA10556-PA	939	GA10556-PA	192..628	92..522	1452	61.6	Plus
Dpse\GA20653-PB	692	GA20653-PB	200..639	92..521	961	43.6	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 19:44:34

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\GM10578-PA	724	GM10578-PA	145..724	1..575	2978	98.8	Plus
Dsec\GM11962-PA	946	GM11962-PA	192..653	92..546	1468	60	Plus
Dsec\GM13808-PA	672	GM13808-PA	97..399	209..526	1170	69.5	Plus
Dsec\GM23704-PA	699	GM23704-PA	216..655	92..521	994	45.3	Plus
Dsec\GM20179-PA	1214	GM20179-PA	450..881	90..519	890	42.1	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 19:44:35

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\GD13105-PA	814	GD13105-PA	84..541	63..526	1611	66.9	Plus
Dsim\GD16140-PA	800	GD16140-PA	192..653	92..546	1465	60	Plus
Dsim\GD18514-PA	713	GD18514-PA	230..669	92..521	999	44.8	Plus
Dsim\GD17585-PA	786	GD17585-PA	212..662	86..531	865	41.1	Plus
Dsim\GD15121-PA	163	GD15121-PA	1..155	296..450	826	100	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 19:44:37

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\GJ14499-PA	733	GJ14499-PA	146..671	1..526	2346	89.1	Plus
Dvir\GJ16043-PA	605	GJ16043-PA	40..507	47..523	1705	68.1	Plus
Dvir\GJ12262-PA	778	GJ12262-PA	18..542	28..539	1595	62	Plus
Dvir\GJ19487-PA	953	GJ19487-PA	191..627	92..521	1470	62.2	Plus
Dvir\GJ24162-PA	710	GJ24162-PA	241..680	92..521	952	43	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 19:44:39

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK14214-PA	745	GK14214-PA	164..693	1..526	2402	90.1	Plus
Dwil\GK12550-PA	800	GK12550-PA	90..524	94..533	1613	69.4	Plus
Dwil\GK16276-PA	950	GK16276-PA	195..632	92..522	1465	61.2	Plus
Dwil\GK14378-PA	683	GK14378-PA	204..642	92..520	954	44.3	Plus
Dwil\GK20023-PA	1234	GK20023-PA	478..895	90..505	880	43	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 19:44:40

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\GE24123-PA	719	GE24123-PA	141..719	1..575	2936	97.6	Plus
Dyak\GE20460-PA	818	GE20460-PA	86..543	70..526	1616	66.7	Plus
Dyak\GE17497-PA	962	GE17497-PA	193..715	92..575	1446	55.3	Plus
Dyak\GE25850-PA	688	GE25850-PA	210..674	92..561	958	42.2	Plus
Dyak\GE17181-PA	1215	GE17181-PA	451..882	90..519	893	42.6	Plus

Library:	RE
Tissue Source:	Drosophila melanogaster embryo
Created by:	Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:	2000-10-23
Comments:	Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:	568
Well:	57
Vector:	pFlc-1
Associated Gene/Transcript	Rm62-RD
Protein status:	RE56857.pep: gold
Sequenced Size:	2267

Clone RE56857 Report

Clone and Library Details

Associated Genes

Clone Sequence Records

RE56857.complete Sequence

RE56857.complete Blast Records

RE56857.complete Sim4 Records

RE56857.hyp Sequence

RE56857.hyp Blast Records

RE56857.pep Sequence

RE56857.pep Blast Records