BDGP Sequence Production Resources |
Search the DGRC for RE57120
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 571 |
Well: | 20 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG10465-RA |
Protein status: | RE57120.pep: gold |
Preliminary Size: | 1104 |
Sequenced Size: | 1270 |
Gene | Date | Evidence |
---|---|---|
CG10465 | 2001-12-14 | Blastp of sequenced clone |
CG10465 | 2002-01-01 | Sim4 clustering to Release 2 |
CG10465 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10465 | 2008-04-29 | Release 5.5 accounting |
CG10465 | 2008-08-15 | Release 5.9 accounting |
CG10465 | 2008-12-18 | 5.12 accounting |
1270 bp (1270 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071521
> RE57120.complete CTTTAAATATAAATTGAAATCGATGGGTCGTTTCCATATCGATATTTTCT CAAATTTTTGAGCTGTCCAAAACAATAAATACATACATTAAATATACCTT TAATACAATACATTGAAGTCAAAATACAATTTTAAATTGCTAATCACTAT TTCGCCGAATTTGCATAAACGCATGAGAACTATGACCGACTAAGCAAGTT ATCTGAATGCAGTAGCTGAACCCCGAAAGCTAGAGAACAAAAAGTATAAA TGTCGGAATCAATGTCAGGTGATCACAAAATTTTATTAAAAGGACATTCC TCCCAATATTTAAAACTTAATGTTGGTGGTCATTTATATTATACCACAAT TGGAACACTGACGAAAAACAATGACACAATGCTGAGCGCAATGTTTAGTG GTAGAATGGAAGTGCTGACTGATTCGGAAGGATGGATTTTAATCGATCGC TGTGGAAATCATTTTGGTATCATTCTTAATTATTTAAGAGATGGCACTGT TCCATTACCAGAAACTAACAAGGAAATTGCAGAATTGCTTGCCGAAGCCA AATACTACTGCATTACCGAGTTAGCTATTTCTTGTGAACGGGCACTATAT GCTCATCAGGAGCCAAAGCCAATTTGCCGCATTCCACTTATAACTTCACA AAAGGAAGAGCAGCTTTTATTAAGTGTTTCTTTAAAGCCGGCTGTTATTC TTGTGGTTCAGCGGCAGAATAACAAGTATTCGTACACAAGTACATCAGAC GACAACTTATTAAAAAATATTGAATTATTTGATAAGCTTTCTTTGCGCTT TAACGAACGAATTTTGTTTATTAAAGACGTAATTGGGCCAAGTGAAATCT GCTGCTGGTCATTTTACGGACACGGAAAAAAAGTAGCTGAAGTGTGTTGC ACTTCAATAGTTTATGCAACTGACAGAAAGCATACTAAAGTTGAATTTCC GGAAGCTCGTATATACGAAGAAACGCTACAAGTCTTGCTTTATGAAAACC GCAATGCACCAGACCAAGAGCTCATGCAGGCAACGTCTTCAGCACGAGTA GGAAGTGCAAGTGGAACCAGCATTAATCAGTACACAAGCGATGAGGAAGA AGAACGCACTGGACTAGCGCGATTACGATCCAACAAGCGTAATAATCCGT CCTGATTTACAAAACTCTATTACATATGATTGACATTGTTTTTTATAAAC GATTAAAAAAAATATATATATGTTTTCTTTTCTTAATAAAAAAAAAAAAA AAACAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10465-RA | 1378 | CG10465-RA | 78..1318 | 1..1241 | 6190 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 1227100..1227906 | 431..1237 | 100 | <- | Minus |
chr2R | 1227956..1228385 | 1..430 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10465-RA | 1..906 | 250..1155 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10465-RA | 1..906 | 250..1155 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10465-RA | 1..906 | 250..1155 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10465-RA | 1..906 | 250..1155 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10465-RA | 1..906 | 250..1155 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10465-RA | 1..1237 | 1..1237 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10465-RA | 1..1237 | 1..1237 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10465-RA | 5..1241 | 1..1237 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10465-RA | 1..1237 | 1..1237 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10465-RA | 5..1241 | 1..1237 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5339706..5340512 | 431..1237 | 100 | <- | Minus |
2R | 5340562..5340991 | 1..430 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5339706..5340512 | 431..1237 | 100 | <- | Minus |
2R | 5340562..5340991 | 1..430 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5339706..5340512 | 431..1237 | 100 | <- | Minus |
2R | 5340562..5340991 | 1..430 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 1227211..1228017 | 431..1237 | 100 | <- | Minus |
arm_2R | 1228067..1228496 | 1..430 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5340905..5341711 | 431..1237 | 100 | <- | Minus |
2R | 5341761..5342190 | 1..430 | 99 | Minus |
Translation from 249 to 1154
> RE57120.pep MSESMSGDHKILLKGHSSQYLKLNVGGHLYYTTIGTLTKNNDTMLSAMFS GRMEVLTDSEGWILIDRCGNHFGIILNYLRDGTVPLPETNKEIAELLAEA KYYCITELAISCERALYAHQEPKPICRIPLITSQKEEQLLLSVSLKPAVI LVVQRQNNKYSYTSTSDDNLLKNIELFDKLSLRFNERILFIKDVIGPSEI CCWSFYGHGKKVAEVCCTSIVYATDRKHTKVEFPEARIYEETLQVLLYEN RNAPDQELMQATSSARVGSASGTSINQYTSDEEEERTGLARLRSNKRNNP S*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21506-PA | 297 | GF21506-PA | 1..297 | 5..301 | 1493 | 92.9 | Plus |
Dana\GF18213-PA | 331 | GF18213-PA | 28..192 | 18..170 | 167 | 32.5 | Plus |
Dana\GF17150-PA | 739 | GF17150-PA | 4..98 | 12..108 | 166 | 43.3 | Plus |
Dana\GF17008-PA | 227 | GF17008-PA | 5..98 | 21..115 | 149 | 36.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10865-PA | 301 | GG10865-PA | 1..301 | 1..301 | 1601 | 99 | Plus |
Dere\GG12384-PA | 335 | GG12384-PA | 33..196 | 18..170 | 169 | 32.7 | Plus |
Dere\GG17322-PA | 727 | GG17322-PA | 9..98 | 17..108 | 165 | 45.7 | Plus |
Dere\GG15048-PA | 228 | GG15048-PA | 5..109 | 21..125 | 161 | 36.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23729-PA | 297 | GH23729-PA | 1..297 | 5..301 | 1500 | 92.6 | Plus |
Dgri\GH20158-PA | 297 | GH20158-PA | 1..297 | 5..301 | 1500 | 92.6 | Plus |
Dgri\GH14231-PA | 810 | GH14231-PA | 4..98 | 12..108 | 163 | 43.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10465-PA | 301 | CG10465-PA | 1..301 | 1..301 | 1558 | 100 | Plus |
CG14647-PB | 335 | CG14647-PB | 33..196 | 18..170 | 163 | 33.3 | Plus |
inc-PC | 211 | CG32810-PC | 14..152 | 11..144 | 159 | 32.6 | Plus |
inc-PD | 211 | CG32810-PD | 14..152 | 11..144 | 159 | 32.6 | Plus |
inc-PB | 211 | CG32810-PB | 14..152 | 11..144 | 159 | 32.6 | Plus |
Ktl-PB | 228 | CG10830-PB | 3..99 | 19..115 | 159 | 38.8 | Plus |
Ktl-PA | 228 | CG10830-PA | 3..99 | 19..115 | 159 | 38.8 | Plus |
CG9467-PA | 730 | CG9467-PA | 9..98 | 17..108 | 158 | 46.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20668-PA | 297 | GI20668-PA | 1..297 | 5..301 | 1500 | 92.6 | Plus |
Dmoj\GI10612-PA | 329 | GI10612-PA | 27..190 | 17..170 | 175 | 34.3 | Plus |
Dmoj\GI22137-PA | 787 | GI22137-PA | 4..98 | 12..108 | 164 | 43.3 | Plus |
Dmoj\GI21987-PA | 230 | GI21987-PA | 3..111 | 19..125 | 153 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11047-PA | 297 | GL11047-PA | 1..297 | 5..301 | 1507 | 93.3 | Plus |
Dper\GL23225-PA | 395 | GL23225-PA | 10..98 | 18..108 | 160 | 45.1 | Plus |
Dper\GL23251-PA | 228 | GL23251-PA | 2..109 | 18..125 | 158 | 36.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10330-PA | 258 | GA10330-PA | 1..258 | 44..301 | 1320 | 94.2 | Plus |
Dpse\GA10583-PA | 228 | GA10583-PA | 2..109 | 18..125 | 158 | 36.7 | Plus |
Dpse\GA21809-PA | 751 | GA21809-PA | 10..98 | 18..108 | 158 | 44 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11095-PA | 301 | GM11095-PA | 1..301 | 1..301 | 1600 | 99 | Plus |
Dsec\GM10753-PA | 335 | GM10753-PA | 33..196 | 18..170 | 168 | 32.7 | Plus |
Dsec\GM23149-PA | 228 | GM23149-PA | 5..98 | 21..114 | 162 | 40 | Plus |
Dsec\GM26209-PA | 730 | GM26209-PA | 9..98 | 17..108 | 161 | 44.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10363-PA | 301 | GD10363-PA | 1..301 | 1..301 | 1600 | 99 | Plus |
Dsim\GD19728-PA | 335 | GD19728-PA | 33..196 | 18..170 | 167 | 32.7 | Plus |
Dsim\GD20024-PA | 228 | GD20024-PA | 5..98 | 21..114 | 162 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20417-PA | 297 | GJ20417-PA | 1..297 | 5..301 | 1500 | 92.6 | Plus |
Dvir\GJ24256-PA | 795 | GJ24256-PA | 4..98 | 12..108 | 165 | 43.3 | Plus |
Dvir\GJ16035-PA | 210 | GJ16035-PA | 14..126 | 11..124 | 160 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21368-PA | 388 | GK21368-PA | 90..388 | 3..301 | 1483 | 91 | Plus |
Dwil\GK13533-PA | 324 | GK13533-PA | 16..185 | 13..170 | 180 | 32.7 | Plus |
Dwil\GK14512-PA | 756 | GK14512-PA | 4..174 | 12..167 | 166 | 31.8 | Plus |
Dwil\GK22689-PA | 230 | GK22689-PA | 3..103 | 19..114 | 156 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11245-PA | 301 | GE11245-PA | 1..301 | 1..301 | 1594 | 98.7 | Plus |
Dyak\GE25415-PA | 335 | GE25415-PA | 33..196 | 18..170 | 170 | 32.7 | Plus |
Dyak\GE24726-PA | 728 | GE24726-PA | 9..98 | 17..108 | 165 | 45.7 | Plus |
Dyak\GE25029-PA | 228 | GE25029-PA | 5..109 | 21..125 | 163 | 37.7 | Plus |
Translation from 249 to 1154
> RE57120.hyp MSESMSGDHKILLKGHSSQYLKLNVGGHLYYTTIGTLTKNNDTMLSAMFS GRMEVLTDSEGWILIDRCGNHFGIILNYLRDGTVPLPETNKEIAELLAEA KYYCITELAISCERALYAHQEPKPICRIPLITSQKEEQLLLSVSLKPAVI LVVQRQNNKYSYTSTSDDNLLKNIELFDKLSLRFNERILFIKDVIGPSEI CCWSFYGHGKKVAEVCCTSIVYATDRKHTKVEFPEARIYEETLQVLLYEN RNAPDQELMQATSSARVGSASGTSINQYTSDEEEERTGLARLRSNKRNNP S*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10465-PA | 301 | CG10465-PA | 1..301 | 1..301 | 1558 | 100 | Plus |
CG14647-PB | 335 | CG14647-PB | 33..196 | 18..170 | 163 | 33.3 | Plus |
inc-PC | 211 | CG32810-PC | 14..152 | 11..144 | 159 | 32.6 | Plus |
inc-PD | 211 | CG32810-PD | 14..152 | 11..144 | 159 | 32.6 | Plus |
inc-PB | 211 | CG32810-PB | 14..152 | 11..144 | 159 | 32.6 | Plus |