BDGP Sequence Production Resources |
Search the DGRC for RE57126
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 571 |
Well: | 26 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG3746-RA |
Protein status: | RE57126.pep: gold |
Preliminary Size: | 557 |
Sequenced Size: | 581 |
Gene | Date | Evidence |
---|---|---|
CG3746 | 2001-12-14 | Blastp of sequenced clone |
CG3746 | 2002-01-01 | Sim4 clustering to Release 2 |
CG3746 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3746 | 2008-04-29 | Release 5.5 accounting |
CG3746 | 2008-08-15 | Release 5.9 accounting |
CG3746 | 2008-12-18 | 5.12 accounting |
581 bp (581 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071522
> RE57126.complete GTCAGTTACCATGGAGCAGCAGGTGGAGAGGTTACGGGTGAGATTGGTGC CCGCCGGAACGGCGGAGGAACGTGCCAGGAATATTATTGCCAATGTGGTC CTGGAGGATGGTCTGGTGCCCTTCATCGATGATCATGCGTCGGAGAAGGT GACCCTGATCCCCCAGCAGTCAGCTGCTCCACTTTCCGCCGCCCAACAGG AACCATCCATCCGGTACTACGCCGTTGGGCCCTCCACCTACAAGCTGTTG TGTCCACTGTGCCGCGAGAGGAGTGAGGCGGCTGTGATGAGAGCAGCCAG CTGCAAGGACGCCAGTTTCTGCCTCAGCCTGCTATCCTGCATCTTTCCGC TCTTCTGGATCTGCTGCGTGTGCACCTGGTGCGGTTGCAATCGGGAGTGG ACCACCAAGGGCGTTTACTGCAGCTCGTGTGGCGGCAAAGTGGGAATCCA GCGCAAGGCCAAGTAGCCCATCCCGCGGACCAATTAAATCGAAATTAATG CCAAATATTTATCTGTTCTATAATTCTATTACGCGTCTAACTCAATTAAA GACACACTGTAAATCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3746-RA | 747 | CG3746-RA | 70..636 | 1..567 | 2835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 18535684..18535909 | 340..565 | 100 | <- | Minus |
chr2R | 18535974..18536312 | 1..339 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3746-RA | 1..456 | 11..466 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3746-RA | 1..456 | 11..466 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3746-RA | 1..456 | 11..466 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3746-RA | 1..456 | 11..466 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3746-RA | 1..456 | 11..466 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3746-RA | 1..565 | 1..565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3746-RA | 1..565 | 1..565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3746-RA | 5..569 | 1..565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3746-RA | 1..565 | 1..565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3746-RA | 5..569 | 1..565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22649408..22649746 | 1..339 | 100 | Minus | |
2R | 22649118..22649343 | 340..565 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22649408..22649746 | 1..339 | 100 | Minus | |
2R | 22649118..22649343 | 340..565 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22649408..22649746 | 1..339 | 100 | Minus | |
2R | 22649118..22649343 | 340..565 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 18536623..18536848 | 340..565 | 100 | <- | Minus |
arm_2R | 18536913..18537251 | 1..339 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22650317..22650542 | 340..565 | 100 | <- | Minus |
2R | 22650607..22650945 | 1..339 | 100 | Minus |
Translation from 0 to 465
> RE57126.hyp SVTMEQQVERLRVRLVPAGTAEERARNIIANVVLEDGLVPFIDDHASEKV TLIPQQSAAPLSAAQQEPSIRYYAVGPSTYKLLCPLCRERSEAAVMRAAS CKDASFCLSLLSCIFPLFWICCVCTWCGCNREWTTKGVYCSSCGGKVGIQ RKAK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3746-PB | 151 | CG3746-PB | 1..151 | 4..154 | 806 | 100 | Plus |
CG3746-PA | 151 | CG3746-PA | 1..151 | 4..154 | 806 | 100 | Plus |
CG43326-PB | 123 | CG43326-PB | 23..117 | 56..148 | 155 | 35.1 | Plus |
CG43326-PA | 123 | CG30217-PB | 23..117 | 56..148 | 155 | 35.1 | Plus |
Translation from 10 to 465
> RE57126.pep MEQQVERLRVRLVPAGTAEERARNIIANVVLEDGLVPFIDDHASEKVTLI PQQSAAPLSAAQQEPSIRYYAVGPSTYKLLCPLCRERSEAAVMRAASCKD ASFCLSLLSCIFPLFWICCVCTWCGCNREWTTKGVYCSSCGGKVGIQRKA K*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13579-PA | 150 | GF13579-PA | 1..150 | 1..151 | 696 | 86.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21772-PA | 151 | GG21772-PA | 1..151 | 1..151 | 761 | 94 | Plus |
Dere\GG21769-PA | 271 | GG21769-PA | 185..267 | 64..147 | 140 | 34.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22104-PA | 153 | GH22104-PA | 2..152 | 4..150 | 521 | 66.9 | Plus |
Dgri\GH22101-PA | 274 | GH22101-PA | 186..270 | 62..147 | 181 | 42.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3746-PB | 151 | CG3746-PB | 1..151 | 1..151 | 806 | 100 | Plus |
CG3746-PA | 151 | CG3746-PA | 1..151 | 1..151 | 806 | 100 | Plus |
CG43326-PB | 123 | CG43326-PB | 23..117 | 53..145 | 155 | 35.1 | Plus |
CG43326-PA | 123 | CG30217-PB | 23..117 | 53..145 | 155 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19239-PA | 152 | GI19239-PA | 1..151 | 1..150 | 489 | 66.2 | Plus |
Dmoj\GI19236-PA | 275 | GI19236-PA | 189..271 | 64..147 | 182 | 48.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10716-PA | 155 | GL10716-PA | 4..155 | 2..151 | 581 | 75.2 | Plus |
Dper\GL10713-PA | 283 | GL10713-PA | 197..279 | 64..147 | 144 | 36.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17657-PA | 155 | GA17657-PA | 4..155 | 2..151 | 605 | 79.1 | Plus |
Dpse\GA15726-PA | 283 | GA15726-PA | 197..279 | 64..147 | 144 | 36.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15622-PA | 151 | GM15622-PA | 1..151 | 1..151 | 769 | 96 | Plus |
Dsec\GM15617-PA | 271 | GM15617-PA | 171..267 | 53..147 | 145 | 35.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25114-PA | 178 | GD25114-PA | 1..177 | 1..151 | 550 | 67.2 | Plus |
Dsim\GD25111-PA | 271 | GD25111-PA | 185..267 | 64..147 | 143 | 35.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20314-PA | 152 | GJ20314-PA | 2..151 | 4..150 | 549 | 69.9 | Plus |
Dvir\GJ20311-PA | 278 | GJ20311-PA | 192..274 | 64..147 | 176 | 43.5 | Plus |