BDGP Sequence Production Resources |
Search the DGRC for RE57138
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 571 |
Well: | 38 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG2124-RA |
Protein status: | RE57138.pep: gold |
Preliminary Size: | 2063 |
Sequenced Size: | 2793 |
Gene | Date | Evidence |
---|---|---|
CG2124 | 2001-12-17 | Blastp of sequenced clone |
CG2124 | 2002-01-01 | Sim4 clustering to Release 2 |
CG2124 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2124 | 2008-04-29 | Release 5.5 accounting |
CG2124 | 2008-08-15 | Release 5.9 accounting |
CG2124 | 2008-12-18 | 5.12 accounting |
2793 bp (2793 high quality bases) assembled on 2001-12-17
GenBank Submission: AY071525
> RE57138.complete GGCAACGCTGCTTACCAGTCAGCTGTTTAGCCGGCAGGTTTTTCAACGAA TGTTTTCATAACGCGTTTTCCATTCAAATTCAATTGAATTGAATTAATTT ACAACCAAATATCGCTCTAAAACATGTGGGCAAGAACAAACTACCTCTGG CGAAGTGTGGGACGTCTGCGCCGCCAAGTATGCACGACGATCGTTTCACC AGCGCGAATATTTGCGGACCGAGAGAATCAGTTCGCCCATGGAATCCTGA TGGATTCTCTCAAACCGTATGCAATACTGCGTCCTCGGGACTCCGCCTGG CAGGATTTGCCCGCATCTGAAGGCTTTATGCGGCCACAGCCAGATGCCAG TGCTGCCGATCTCTATGCGGACTTTTTAGGCCTGGTGAGGCACTGTAATC GCATGGAACTGAAGATCAGCGATAGCCGCTACGAAGCCTTTACCCGCTGC TTCTGTGAGCAGCTGCATCGCCTTACGGATGAACAACTTCTTGGATCGCT TAGTGCCTTGGCCGAGCTGCCCGTACCGGAATCGCCCAAAGCCAAGAACT ACATGGAGATATGGAATACCCTGGACATCGAGTGCTGTCGCCGCATCGAG CGATGGTCCAGTGAACAATTGCTACTCGTGAGCGATGCCTGGTATCGTCT TGGTCTGGTCAGGATAGGCGAGTACGTGTGGCTGGCGCTGAAAAAGCTCG GCCGCAAGCTGCGAAAGCTGCCGCCAGAACAGCTCGTTCACTCCATGTTC CTGTGCAATCTACTGCGCCGACCCGTCTTCGAGATGTTCGATTTCGAGTT GAATCTGGCCCGCTGCGTGGATCAAATGACGCTGTCCGAATTGGGCGTAA TGGCCATGGGCTTCTTTAAGACACAGACGCCTATCAGAAATCCGGAGCTG CTAACGCAACTCTATCAGCGATTAGGCAGCGAGCTGGACACCGTGGAAGA CATTGTCCTGGTAGCGCTGCTCAAGGTGCTGCGGTACAGCAGCAAGCTGC CACAAGTGGAGCCGCTAAAGAAGATGTTAAGCGCTCTAGAGTCGCAAGTG GATCGCGTTTCCCTCCTCACGTGCCTGCACATGGCTCTTCTGGGCTGTGA ACTGCAAACGTGCAATGATGCACTGGTGGAGCGCATACTGCTGAGATTCG AGCGTGAGTTAGAGACTGCCCGCCTCAAGGATATGGAGCGAATTTGTCTG GTAATGGCCCTTTTCAATATTACAACTAAGTCGGGAGTGGAACGCCGGTT GGCGGAGAGATTGCCCGATTTGCTGCGCCAGCGTATAGAGGAGATACTGC GCCATCCTCGTTGTTTCTCCAACTGCCTTCAGTTTCTCACAATGCGTGGT GTTTACGATCTTGAGCTTTTGGGCGTGGCACTGGAGCCGCGTTTCCTGAA GCATGCGTACCCAAGCGGATTGCCCGGGCGTGAGTACTTCCATTTGGATG GGTTCGCACGCCTCCTGGGGCCGGAATACCAGGGAGCACTGGTTACCGAG AAGCAACGACAGCAGATGGGCCGCAATTACACGCAGTACATCCCCGATCG GGACGGACGCTTCAAGCTGAATAATACCGATCGTATTCTAGTGGAAATAC GGGATGCGATCACCATGATCCACCGTCCCGTGACCTTCAAGCACATCCTG CCGCAATACGATCGATGCGATGTAGTGTTGTGCTACGACCGCCGGCAACG GAAGGCGTTGTCCATAAATGGTGAGGCCTGTCAGGATTACAGCGGTGAGA TTCTCACCCGGAAGCACTTACTGGGTGAGAGAAAGGCTGCGGATGACCAG CTGGTCACAGTGGTTATCGTTATTGCCGGCTGGAACAACGTAATCCGCGA TAAGGATCGTTTCACCGGCCAAATGGATATGAAGCTAAGGCAGCTGCGGC AATTGGGACATCAGCCACTGGTGATCTATTGGCACGAGTGGCGGGAACTG GAGAACTCAGCTGACCGCCAGGACTTTCTGAAACGCCGCCTTAGCCAAAT TGCAAAAATTTAGCAGGAAATAAAAACGGCAATAGAATTGATATTAGTCA GTCATTAGCATTATCTGAACATTGTACAGGCACAACACTACGATCTATTA ATTATCTAGAAAAAAAAGCAATAATTATCGAATATTTAATAATGACCGCC CGCGGCCGACAACTACTAGCACAGCGTCTTGCTCCCGGATCCCCGCAATC GGACCGCAGCGGACCGTTCGTCGCGATCCATTGTATGGTTGATGCCGTCG TCAGAGGGTGGCGCTCAACGCTCGCTTGGTGTACTCGTAGACCACGAACA GGGTGGCCGTGGCTGGAATGGTGCGCAGGACAGATGGCAGCAGGCCGCGA TAGAGTGCCAGGACACCTTCGCGACGGACTATGTCCGCTCCCACGGCGAA CATGCTTTCGTTGAGGTTCTTCACCTGTATGCGACTCTTAATTACGTCTG CAGGAAACGTCGACGTCCAGAGGCAGACGCCTCCAATGGCGCCGGCGATC ATCGTACGCAGTGGTCCAATATCATCTTTGGATTGATCATCCCTGCAAAG GAAAATAAGAATTATGCCAATGTAAATAACTATTTAACTTTGTCCAACAT CTTTCATTTGAATAGACTAACGAAGATCGAGTTATCTGTCCAGCTAAGGA TTTTGTTAAGATATTGTTGAACAAATTCTGTAAATGACTAAATATAACTA TACTGCTAATTAGTATGATAACTGAAGAAGAACGATTGTTGTTCACTCGT AAACATTAAACTCATTAATCTCCTTCTAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2124-RA | 2840 | CG2124-RA | 51..2828 | 1..2778 | 13890 | 100 | Plus |
CG1628.a | 2245 | CG1628.a | 1450..2073 | 2546..1923 | 3120 | 100 | Minus |
CG1628-RB | 2051 | CG1628-RB | 1256..1879 | 2546..1923 | 3120 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 10487493..10489415 | 1..1923 | 100 | -> | Plus |
chrX | 10489682..10490535 | 1924..2777 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2124-RA | 1..1890 | 124..2013 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2124-RA | 1..1890 | 124..2013 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2124-RA | 1..1890 | 124..2013 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2124-RA | 1..1890 | 124..2013 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2124-RA | 1..1890 | 124..2013 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2124-RA | 51..2825 | 1..2775 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2124-RA | 51..2825 | 1..2775 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2124-RA | 6..2782 | 1..2777 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2124-RA | 51..2825 | 1..2775 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2124-RA | 6..2782 | 1..2777 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10596127..10598049 | 1..1923 | 100 | -> | Plus |
X | 10598316..10599169 | 1924..2777 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10596127..10598049 | 1..1923 | 100 | -> | Plus |
X | 10598316..10599169 | 1924..2777 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10596127..10598049 | 1..1923 | 100 | -> | Plus |
X | 10598316..10599169 | 1924..2777 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 10490160..10492082 | 1..1923 | 100 | -> | Plus |
arm_X | 10492349..10493202 | 1924..2777 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10604225..10606147 | 1..1923 | 100 | -> | Plus |
X | 10606414..10607267 | 1924..2777 | 100 | Plus |
Translation from 123 to 2012
> RE57138.pep MWARTNYLWRSVGRLRRQVCTTIVSPARIFADRENQFAHGILMDSLKPYA ILRPRDSAWQDLPASEGFMRPQPDASAADLYADFLGLVRHCNRMELKISD SRYEAFTRCFCEQLHRLTDEQLLGSLSALAELPVPESPKAKNYMEIWNTL DIECCRRIERWSSEQLLLVSDAWYRLGLVRIGEYVWLALKKLGRKLRKLP PEQLVHSMFLCNLLRRPVFEMFDFELNLARCVDQMTLSELGVMAMGFFKT QTPIRNPELLTQLYQRLGSELDTVEDIVLVALLKVLRYSSKLPQVEPLKK MLSALESQVDRVSLLTCLHMALLGCELQTCNDALVERILLRFERELETAR LKDMERICLVMALFNITTKSGVERRLAERLPDLLRQRIEEILRHPRCFSN CLQFLTMRGVYDLELLGVALEPRFLKHAYPSGLPGREYFHLDGFARLLGP EYQGALVTEKQRQQMGRNYTQYIPDRDGRFKLNNTDRILVEIRDAITMIH RPVTFKHILPQYDRCDVVLCYDRRQRKALSINGEACQDYSGEILTRKHLL GERKAADDQLVTVVIVIAGWNNVIRDKDRFTGQMDMKLRQLRQLGHQPLV IYWHEWRELENSADRQDFLKRRLSQIAKI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21432-PA | 637 | GF21432-PA | 1..637 | 1..629 | 2563 | 76.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18361-PA | 630 | GG18361-PA | 1..630 | 1..629 | 3080 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12705-PA | 630 | GH12705-PA | 13..630 | 18..629 | 2223 | 67.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2124-PA | 629 | CG2124-PA | 1..629 | 1..629 | 3280 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14469-PA | 614 | GI14469-PA | 5..614 | 26..629 | 2210 | 67.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14978-PA | 277 | GL14978-PA | 1..277 | 354..629 | 1117 | 74.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15256-PA | 634 | GA15256-PA | 1..634 | 1..629 | 2458 | 72.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11426-PA | 632 | GM11426-PA | 1..632 | 1..629 | 3172 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16979-PA | 632 | GD16979-PA | 1..632 | 1..629 | 3172 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18804-PA | 641 | GJ18804-PA | 24..641 | 15..629 | 2250 | 67.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20102-PA | 643 | GK20102-PA | 1..643 | 1..629 | 2317 | 66.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17849-PA | 629 | GE17849-PA | 1..629 | 1..629 | 3121 | 92.4 | Plus |
Translation from 123 to 2012
> RE57138.hyp MWARTNYLWRSVGRLRRQVCTTIVSPARIFADRENQFAHGILMDSLKPYA ILRPRDSAWQDLPASEGFMRPQPDASAADLYADFLGLVRHCNRMELKISD SRYEAFTRCFCEQLHRLTDEQLLGSLSALAELPVPESPKAKNYMEIWNTL DIECCRRIERWSSEQLLLVSDAWYRLGLVRIGEYVWLALKKLGRKLRKLP PEQLVHSMFLCNLLRRPVFEMFDFELNLARCVDQMTLSELGVMAMGFFKT QTPIRNPELLTQLYQRLGSELDTVEDIVLVALLKVLRYSSKLPQVEPLKK MLSALESQVDRVSLLTCLHMALLGCELQTCNDALVERILLRFERELETAR LKDMERICLVMALFNITTKSGVERRLAERLPDLLRQRIEEILRHPRCFSN CLQFLTMRGVYDLELLGVALEPRFLKHAYPSGLPGREYFHLDGFARLLGP EYQGALVTEKQRQQMGRNYTQYIPDRDGRFKLNNTDRILVEIRDAITMIH RPVTFKHILPQYDRCDVVLCYDRRQRKALSINGEACQDYSGEILTRKHLL GERKAADDQLVTVVIVIAGWNNVIRDKDRFTGQMDMKLRQLRQLGHQPLV IYWHEWRELENSADRQDFLKRRLSQIAKI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2124-PA | 629 | CG2124-PA | 1..629 | 1..629 | 3280 | 100 | Plus |