BDGP Sequence Production Resources |
Search the DGRC for RE57384
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 573 |
Well: | 84 |
Vector: | pFlc-1 |
Associated Gene/Transcript | S2P-RA |
Protein status: | RE57384.pep: gold |
Preliminary Size: | 1735 |
Sequenced Size: | 2034 |
Gene | Date | Evidence |
---|---|---|
CG8988 | 2001-12-14 | Blastp of sequenced clone |
CG8988 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8988 | 2003-01-01 | Sim4 clustering to Release 3 |
S2P | 2008-04-29 | Release 5.5 accounting |
S2P | 2008-08-15 | Release 5.9 accounting |
S2P | 2008-12-18 | 5.12 accounting |
2034 bp (2034 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071529
> RE57384.complete CTGTAATCGATTGCGATTAGCTTTTGGTATTTCGATTTTTTACGCAGGTT AATTTGCGCACAAGATTCCCAGACGTGATTAATGCTGATTTCTGGTCTGG ACTACACAGCATTGCTGGTATAAGGAGTCGGGACCAGAGGAGTAAGATTT CGGGAAGGAATCCCGTCCGGTAGGGACTACTAGCATTCGCAAGTGACGTC CAGCAACCGGAGGACCCCCAACTGTAGAATCCGCATCACCATCCTAATCC CAACAAACCAATGACATCTTGAGACCTCACCAGCCATGGATCCCTTCGTG TTCTTCATAGTACTGGCATCGCTTTATGGCGTTCTTTACTTTTTCGACCG CTTCTTCAAGAGTTGCATGCACTACCCGTACGATGCCTTCCTCAAGAACA CCGGGCTGAGTATAAATTTCATGAGCCTCCACTGGCACACGAGTGCCTTT AACAGGACCCTCCTACGCTGGGGATCTGCCGGTAACAGCTGCACCCGGAG AGTAATGATCACCAGCTTTAATGTAGGAGTCCTGGTCACCTTTTCTCTGC TCCCGATCGGTCTGATCCTGCTCATTGCCACTATCTTCAGCAGTGGTGAA CAAGACAGCTCTTCGTCTGTATCCTCGCCCGTTGGAGTCCCTGTGCAGCT GGAAATTCTACTGCCCGGCGTCAACTTGCCGTTGGAGGAGATCGGATACT ACATCACAACCCTTGTGCTCTGCTTGGTGGTGCACGAGATGGGACACGCC CTGGCCGCTGTGATGGAGGATGTGCCTGTCACCGGGTTTGGAATAAAGTT CATCTTCTGCCTGCCGTTAGCATACACGGAGCTCTCCCACGACCACTTAA ACAGTCTACGTTGGTTCCGCAAGCTACGTGTTCTGTGCGCTGGAATCTGG CATAATTTTGTGTTCGCTGGCGTGTGCTATCTCTTAATCTCAACGGTGGG AATCACTATGTCACCTTTGTACGCTTACAACCAACACGTAGTGGTCACTG AACTAACAAGGAAATCCCCGCTGAGGGGAGAGCGCGGCTTGCAAGTGGAC AATCAAATAACCCAAGTAAACGGCTGCCCAGTAAACAGCGAGGAGAGTTG GGTGACATGCCTGCAGAACTCTCTGAAGCTCAAGCCGGGCTACTGTGTGA GTGCGGACTTCGTGCAGCTTAACGACGAAAGCAGCGCCATCTCACATCAT AGCATTGATGGTCAGCTACAGTGCTGTGATGAACTAAATCCGAACGTAAG CTGCTTCGAGGTGGTGGAGGACGCAAATGGAGATGTGCCGGTGGAGCTGC CGCAGCATGTATGTCTCAATGTGCGCCGCACTTTGGAGGAGGTCTCCGAG CACTGCTCGTCCGGAGTTTGCAACGAGGGATTCTGCCTACGACCGCTTAT ACGAAATATCACTGCCATAATGACGTTCAAGCGACAGAATTTTCGCGGAG AGAAGCTGCCGCCGGTGATCTATGTGGGCCATCCATGGGATGTCACTCGA ACTGTGGAGGTATCCGCCTTTGTGCCGAGATATAGCTTATTAAAGGCAGC CTGGCCGGATGCCTGGCTGCTGCTCCTCAAGTATAACGTGGTCTTCAGCA TAGGATTGGCGTTGATCAATGCCATTCCCTGCTTTGGTTTCGATGGCGCC CACATTACCAGCACCGTGATACACAGCTTCTTGGTGGGCAGAGTGGATCA GCATGCCAAGAGAGATATCATCTCGTTGATAATCACCAGCGTGGGTTCCC TTCTCTTTGCACTGGCCCTGCTTAAGGTGGCCTGGTTGAGTTTTCTGCGA CCCCTGCTTTAAGAACTGAAATGGAAAACTGAAATGGATCCTGGGAGTTC AACTCCCTGCAAAGACGCTAGACTGCTATTTCACCTTCACGAAACACACA AAAACACAGCGAATTGTAGCACCTCAAAGATTCGATAGCTTTTTGTCATA GTCCTTAGTCTTAACTCGTATTTATTTTCGTACGGTTGTCGAGCTCAAAA ATAAAATCAAATTAAGCCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 7729380..7730600 | 2017..797 | 6105 | 100 | Minus |
chr2R | 21145070 | chr2R | 7730666..7731105 | 798..359 | 2200 | 100 | Minus |
chr2R | 21145070 | chr2R | 7731155..7731510 | 360..1 | 1675 | 98.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 11842104..11843324 | 2017..797 | 6105 | 100 | Minus |
2R | 25286936 | 2R | 11843390..11843829 | 798..359 | 2200 | 100 | Minus |
2R | 25286936 | 2R | 11843879..11844238 | 360..1 | 1785 | 99.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 11843303..11844523 | 2017..797 | 6105 | 100 | Minus |
2R | 25260384 | 2R | 11844589..11845028 | 798..359 | 2200 | 100 | Minus |
2R | 25260384 | 2R | 11845078..11845437 | 360..1 | 1785 | 99.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 7729379..7730598 | 799..2018 | 99 | <- | Minus |
chr2R | 7730666..7731103 | 361..798 | 100 | <- | Minus |
chr2R | 7731155..7731510 | 1..360 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
S2P-RA | 1..1527 | 286..1812 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
S2P-RA | 1..1527 | 286..1812 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
S2P-RA | 1..1527 | 286..1812 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
S2P-RA | 1..1527 | 286..1812 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
S2P-RA | 1..1527 | 286..1812 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
S2P-RA | 1..2017 | 1..2018 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
S2P-RA | 1..2017 | 1..2018 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
S2P-RA | 3..2019 | 1..2018 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
S2P-RA | 1..2017 | 1..2018 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
S2P-RA | 3..2019 | 1..2018 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11843879..11844238 | 1..360 | 99 | Minus | |
2R | 11842103..11843322 | 799..2018 | 99 | <- | Minus |
2R | 11843390..11843827 | 361..798 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11843879..11844238 | 1..360 | 99 | Minus | |
2R | 11842103..11843322 | 799..2018 | 99 | <- | Minus |
2R | 11843390..11843827 | 361..798 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11843879..11844238 | 1..360 | 99 | Minus | |
2R | 11842103..11843322 | 799..2018 | 99 | <- | Minus |
2R | 11843390..11843827 | 361..798 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 7730895..7731332 | 361..798 | 100 | <- | Minus |
arm_2R | 7729608..7730827 | 799..2018 | 99 | <- | Minus |
arm_2R | 7731384..7731743 | 1..360 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11843302..11844521 | 799..2018 | 99 | <- | Minus |
2R | 11844589..11845026 | 361..798 | 100 | <- | Minus |
2R | 11845078..11845437 | 1..360 | 99 | Minus |
Translation from 285 to 1811
> RE57384.pep MDPFVFFIVLASLYGVLYFFDRFFKSCMHYPYDAFLKNTGLSINFMSLHW HTSAFNRTLLRWGSAGNSCTRRVMITSFNVGVLVTFSLLPIGLILLIATI FSSGEQDSSSSVSSPVGVPVQLEILLPGVNLPLEEIGYYITTLVLCLVVH EMGHALAAVMEDVPVTGFGIKFIFCLPLAYTELSHDHLNSLRWFRKLRVL CAGIWHNFVFAGVCYLLISTVGITMSPLYAYNQHVVVTELTRKSPLRGER GLQVDNQITQVNGCPVNSEESWVTCLQNSLKLKPGYCVSADFVQLNDESS AISHHSIDGQLQCCDELNPNVSCFEVVEDANGDVPVELPQHVCLNVRRTL EEVSEHCSSGVCNEGFCLRPLIRNITAIMTFKRQNFRGEKLPPVIYVGHP WDVTRTVEVSAFVPRYSLLKAAWPDAWLLLLKYNVVFSIGLALINAIPCF GFDGAHITSTVIHSFLVGRVDQHAKRDIISLIITSVGSLLFALALLKVAW LSFLRPLL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13403-PA | 505 | GF13403-PA | 1..505 | 1..508 | 2368 | 87.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22629-PA | 508 | GG22629-PA | 1..508 | 1..508 | 2647 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22883-PA | 519 | GH22883-PA | 1..519 | 1..508 | 1802 | 69 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
S2P-PA | 508 | CG8988-PA | 1..508 | 1..508 | 2671 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21268-PA | 518 | GI21268-PA | 1..518 | 1..508 | 1890 | 69.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10249-PA | 506 | GL10249-PA | 1..506 | 1..508 | 2316 | 85.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21457-PA | 506 | GA21457-PA | 1..506 | 1..508 | 2311 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20407-PA | 508 | GM20407-PA | 1..508 | 1..508 | 2674 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25883-PA | 508 | GD25883-PA | 1..508 | 1..508 | 2679 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20871-PA | 510 | GJ20871-PA | 1..510 | 1..508 | 1887 | 70.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17918-PA | 512 | GK17918-PA | 1..512 | 1..508 | 2077 | 76.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13498-PA | 508 | GE13498-PA | 1..508 | 1..508 | 2656 | 98 | Plus |
Translation from 285 to 1811
> RE57384.hyp MDPFVFFIVLASLYGVLYFFDRFFKSCMHYPYDAFLKNTGLSINFMSLHW HTSAFNRTLLRWGSAGNSCTRRVMITSFNVGVLVTFSLLPIGLILLIATI FSSGEQDSSSSVSSPVGVPVQLEILLPGVNLPLEEIGYYITTLVLCLVVH EMGHALAAVMEDVPVTGFGIKFIFCLPLAYTELSHDHLNSLRWFRKLRVL CAGIWHNFVFAGVCYLLISTVGITMSPLYAYNQHVVVTELTRKSPLRGER GLQVDNQITQVNGCPVNSEESWVTCLQNSLKLKPGYCVSADFVQLNDESS AISHHSIDGQLQCCDELNPNVSCFEVVEDANGDVPVELPQHVCLNVRRTL EEVSEHCSSGVCNEGFCLRPLIRNITAIMTFKRQNFRGEKLPPVIYVGHP WDVTRTVEVSAFVPRYSLLKAAWPDAWLLLLKYNVVFSIGLALINAIPCF GFDGAHITSTVIHSFLVGRVDQHAKRDIISLIITSVGSLLFALALLKVAW LSFLRPLL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
S2P-PA | 508 | CG8988-PA | 1..508 | 1..508 | 2671 | 100 | Plus |