BDGP Sequence Production Resources |
Search the DGRC for RE57452
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 574 |
Well: | 52 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Cpr11A-RA |
Protein status: | RE57452.pep: gold |
Preliminary Size: | 893 |
Sequenced Size: | 1340 |
Gene | Date | Evidence |
---|---|---|
CG2560 | 2001-12-14 | Blastp of sequenced clone |
CG2560 | 2002-01-01 | Sim4 clustering to Release 2 |
CG2560 | 2003-01-01 | Sim4 clustering to Release 3 |
Cpr11A | 2008-04-29 | Release 5.5 accounting |
Cpr11A | 2008-08-15 | Release 5.9 accounting |
Cpr11A | 2008-12-18 | 5.12 accounting |
1340 bp (1340 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071531
> RE57452.complete CGGTATTTATTTGCTAGAATCTGTGAGCATCGGAACTAACCGAGCCGCTA CAATAAAAAAAAAAAAACATAAATTAGTCCTCGTTACGAAAAAAAAAACA CACATAAAAATGAAGAGTTTTCTGATCCTTCTGGGTTTCGCTGCTCTGGC CGCTGCCGATGTCAAGCATCTGACAGATCGCAATCTGGACCTCTTCAAGT ACAATCCCAGCGATATCTACACCCTGCCCGAGGACATCGATGACGACAAG CCGGCGGTGCACTTTAGCGGCGATGTCATGAAGGCCAAGACCGAAACCCT CCAGAACTACAACTCGGGCAAGAAATTCAAGCTGGAACTGAAGACCCAGA ACGGCATCGAAGTGAGCAGCGTGGGCAAACTGAAGGACGACAAGACCTTC GTGGTCAGCGGCTCCTACTCGTTCACCGGCGCCGATGGCAAGCGGTACAA GACCCGTTACACCGCCGATGAGTTCGGCTATCATCCCATCACCGAGCTGG ATCTGGACATTCCCGAACCCCAGCCTTTGGCTTCTGCCGGACAGCGCCAG ACCGTGGATCCCAGCAGCCTGTTGGGCAACAAGAACCGTTTCCAGTTCCT GCAGCAGACCCTGGACTCCGATCAAGGATCGCAAGGTCCTCTGAGGGGCA GTGGACAGAGTGGCGATGACTATAGCTACACGTCTCCCTATGGAAATGGC AATGCTTACGGTAATGGAGTTGGAAACGGATACGGAAATGGAGTTGGCAA CGGATACGGAAATGGAGTTGGAAACGGACAAGGAAATGGAGCTGGAAACG CATACGGAAATGGAAATGGAGTTGGAAACGGATACGGAAATGGCAACGGC AATGGCTACGATTATCAGCCACCTCAGGTGCCCCTGGCGACGCCATCTCG TCTGTATCTGCCCACCGCATAAGGCGATTATTATTTAGATATACCCTTAT CCAACACCCTTCTCCCGCAAGATTTATGCCCCACCCGATTCCCGATTCCT GATTCCCGATTCCCGATTCCCGATCCTCGATTTTCCCCCCAGCTGCAAGT ATTTAGTTTTTAAGTGCAACTCCAACAGGCAAATGAAGAGTAAAACAGAG CTAGCGAAATTTTTTTTTATCATTTTTTAGTGTTATACACGGAGCACAAT TTTATATGATATTATACACTGATATATGTTATATATCTAGCCTACACAAA AACACGCACACACACACACAAAAAAAACAAACACACACACAAATCCCGAG CAAAGACACAAACGAATCTATGTATATACACTGAGTGATATTAGTAGTAA ATAAAATGGCTAAACTAACGATCTAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cpr11A-RA | 1327 | Cpr11A-RA | 3..1323 | 3..1323 | 6605 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 12379606..12380420 | 517..1323 | 3810 | 98.4 | Plus |
chrX | 22417052 | chrX | 12378791..12379005 | 122..336 | 1075 | 100 | Plus |
chrX | 22417052 | chrX | 12379282..12379461 | 337..516 | 885 | 99.4 | Plus |
chrX | 22417052 | chrX | 12377941..12378059 | 3..121 | 595 | 100 | Plus |
chrX | 22417052 | chrX | 12379796..12379908 | 731..843 | 295 | 84.1 | Plus |
chrX | 22417052 | chrX | 12379820..12379932 | 707..819 | 295 | 84.1 | Plus |
chrX | 22417052 | chrX | 12379779..12379855 | 738..814 | 220 | 85.7 | Plus |
chrX | 22417052 | chrX | 12379827..12379903 | 690..766 | 220 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 12488642..12489448 | 517..1323 | 4035 | 100 | Plus |
X | 23542271 | X | 12487827..12488041 | 122..336 | 1075 | 100 | Plus |
X | 23542271 | X | 12488317..12488496 | 337..516 | 900 | 100 | Plus |
X | 23542271 | X | 12486975..12487093 | 3..121 | 595 | 100 | Plus |
X | 23542271 | X | 12488856..12488968 | 707..819 | 295 | 84.1 | Plus |
X | 23542271 | X | 12488832..12488944 | 731..843 | 295 | 84.1 | Plus |
X | 23542271 | X | 12488815..12488891 | 738..814 | 220 | 85.7 | Plus |
X | 23542271 | X | 12488863..12488939 | 690..766 | 220 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 12496740..12497546 | 517..1323 | 4035 | 100 | Plus |
X | 23527363 | X | 12495925..12496139 | 122..336 | 1075 | 100 | Plus |
X | 23527363 | X | 12496415..12496594 | 337..516 | 900 | 100 | Plus |
X | 23527363 | X | 12495073..12495191 | 3..121 | 595 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 4063..4151 | 753..665 | 130 | 60.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 12377939..12378059 | 1..121 | 98 | -> | Plus |
chrX | 12378791..12379005 | 122..336 | 100 | -> | Plus |
chrX | 12379282..12379461 | 337..516 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr11A-RA | 1..813 | 110..922 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr11A-RA | 1..813 | 110..922 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr11A-RA | 1..813 | 110..922 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr11A-RA | 1..813 | 110..922 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr11A-RA | 1..813 | 110..922 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr11A-RA | 3..1323 | 3..1324 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr11A-RA | 3..1323 | 3..1324 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr11A-RA | 4..1326 | 1..1323 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr11A-RA | 3..1323 | 3..1324 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr11A-RA | 4..1326 | 1..1323 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12487827..12488041 | 122..336 | 100 | -> | Plus |
X | 12488317..12488496 | 337..516 | 100 | -> | Plus |
X | 12486973..12487093 | 1..121 | 98 | -> | Plus |
X | 12488642..12489448 | 517..1324 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12487827..12488041 | 122..336 | 100 | -> | Plus |
X | 12488317..12488496 | 337..516 | 100 | -> | Plus |
X | 12486973..12487093 | 1..121 | 98 | -> | Plus |
X | 12488642..12489448 | 517..1324 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12487827..12488041 | 122..336 | 100 | -> | Plus |
X | 12488317..12488496 | 337..516 | 100 | -> | Plus |
X | 12486973..12487093 | 1..121 | 98 | -> | Plus |
X | 12488642..12489448 | 517..1324 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 12381006..12381126 | 1..121 | 98 | -> | Plus |
arm_X | 12381860..12382074 | 122..336 | 100 | -> | Plus |
arm_X | 12382350..12382529 | 337..516 | 100 | -> | Plus |
arm_X | 12382675..12383481 | 517..1324 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12495925..12496139 | 122..336 | 100 | -> | Plus |
X | 12496415..12496594 | 337..516 | 100 | -> | Plus |
X | 12496740..12497546 | 517..1324 | 99 | Plus | |
X | 12495071..12495191 | 1..121 | 98 | -> | Plus |
Translation from 0 to 921
> RE57452.hyp CIYLLESVSIGTNRAATIKKKKHKLVLVTKKKTHIKMKSFLILLGFAALA AADVKHLTDRNLDLFKYNPSDIYTLPEDIDDDKPAVHFSGDVMKAKTETL QNYNSGKKFKLELKTQNGIEVSSVGKLKDDKTFVVSGSYSFTGADGKRYK TRYTADEFGYHPITELDLDIPEPQPLASAGQRQTVDPSSLLGNKNRFQFL QQTLDSDQGSQGPLRGSGQSGDDYSYTSPYGNGNAYGNGVGNGYGNGVGN GYGNGVGNGQGNGAGNAYGNGNGVGNGYGNGNGNGYDYQPPQVPLATPSR LYLPTA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cpr11A-PA | 270 | CG2560-PA | 1..270 | 37..306 | 1444 | 100 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 141..318 | 102..285 | 207 | 33.9 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 141..318 | 102..285 | 207 | 33.9 | Plus |
Cpr65Au-PB | 106 | CG18778-PB | 22..100 | 89..162 | 148 | 38 | Plus |
Cpr65Au-PA | 106 | CG18778-PA | 22..100 | 89..162 | 148 | 38 | Plus |
Translation from 109 to 921
> RE57452.pep MKSFLILLGFAALAAADVKHLTDRNLDLFKYNPSDIYTLPEDIDDDKPAV HFSGDVMKAKTETLQNYNSGKKFKLELKTQNGIEVSSVGKLKDDKTFVVS GSYSFTGADGKRYKTRYTADEFGYHPITELDLDIPEPQPLASAGQRQTVD PSSLLGNKNRFQFLQQTLDSDQGSQGPLRGSGQSGDDYSYTSPYGNGNAY GNGVGNGYGNGVGNGYGNGVGNGQGNGAGNAYGNGNGVGNGYGNGNGNGY DYQPPQVPLATPSRLYLPTA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21926-PA | 243 | GF21926-PA | 1..243 | 1..270 | 994 | 77.4 | Plus |
Dana\GF10924-PA | 106 | GF10924-PA | 22..100 | 53..126 | 143 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17723-PA | 216 | GG17723-PA | 1..216 | 1..270 | 1015 | 77.4 | Plus |
Dere\GG14084-PA | 106 | GG14084-PA | 22..100 | 53..126 | 141 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24125-PA | 220 | GH24125-PA | 2..220 | 3..270 | 890 | 69.4 | Plus |
Dgri\GH21539-PA | 91 | GH21539-PA | 12..86 | 49..126 | 151 | 43.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cpr11A-PA | 270 | CG2560-PA | 1..270 | 1..270 | 1444 | 100 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 141..318 | 66..249 | 207 | 33.9 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 141..318 | 66..249 | 207 | 33.9 | Plus |
AnxB11-PG | 511 | CG9968-PG | 128..189 | 191..254 | 155 | 46.9 | Plus |
AnxB11-PE | 511 | CG9968-PE | 128..189 | 191..254 | 155 | 46.9 | Plus |
AnxB11-PB | 511 | CG9968-PB | 128..189 | 191..254 | 155 | 46.9 | Plus |
AnxB11-PG | 511 | CG9968-PG | 120..189 | 187..258 | 153 | 43.1 | Plus |
AnxB11-PE | 511 | CG9968-PE | 120..189 | 187..258 | 153 | 43.1 | Plus |
AnxB11-PB | 511 | CG9968-PB | 120..189 | 187..258 | 153 | 43.1 | Plus |
Cpr65Au-PB | 106 | CG18778-PB | 22..100 | 53..126 | 148 | 38 | Plus |
Cpr65Au-PA | 106 | CG18778-PA | 22..100 | 53..126 | 148 | 38 | Plus |
Fst-PA | 286 | CG9434-PA | 29..123 | 173..262 | 148 | 38.9 | Plus |
CG9106-PB | 143 | CG9106-PB | 8..81 | 192..265 | 144 | 45.3 | Plus |
CG9106-PA | 143 | CG9106-PA | 8..81 | 192..265 | 144 | 45.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16383-PA | 234 | GI16383-PA | 1..234 | 1..270 | 846 | 71.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25331-PA | 280 | GL25331-PA | 18..280 | 17..270 | 875 | 70.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15394-PA | 272 | GA15394-PA | 18..272 | 17..270 | 882 | 80.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11567-PA | 236 | GM11567-PA | 1..236 | 1..270 | 1166 | 86.3 | Plus |
Dsec\GM13867-PA | 106 | GM13867-PA | 22..100 | 53..126 | 139 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17081-PA | 236 | GD17081-PA | 1..236 | 1..270 | 1170 | 87.4 | Plus |
Dsim\GD13152-PA | 106 | GD13152-PA | 22..100 | 53..126 | 140 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16756-PA | 246 | GJ16756-PA | 1..246 | 1..270 | 953 | 76.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16498-PA | 262 | GK16498-PA | 1..262 | 1..270 | 986 | 76.4 | Plus |