BDGP Sequence Production Resources |
Search the DGRC for RE57663
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 576 |
Well: | 63 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG7272-RA |
Protein status: | RE57663.pep: gold |
Preliminary Size: | 1038 |
Sequenced Size: | 1215 |
Gene | Date | Evidence |
---|---|---|
CG7272 | 2001-12-17 | Blastp of sequenced clone |
CG7272 | 2002-01-01 | Sim4 clustering to Release 2 |
CG7272 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7272 | 2008-04-29 | Release 5.5 accounting |
CG7272 | 2008-08-15 | Release 5.9 accounting |
CG7272 | 2008-12-18 | 5.12 accounting |
1215 bp (1215 high quality bases) assembled on 2001-12-17
GenBank Submission: AY071536
> RE57663.complete GCTCAGTATTTGTTCGTTTGTTGTTACGGCAGCCGCCAGTCGGTCGTTAG TTTTTGTTTTCGTTCATTTGTTTATACTCGCGCGGCACTCGGCCCCCCTC CCGTTCCCACATAACCCGTTTGAAAGGCATCAACTGAGAGTCATTGAAAT CATGGAGGCACTGGGGGATCTCTTGGCGCCACACAGCGAACTAATCGCCA AGGTAGCCGGCACCATAACTACCCTGCAATTTCTGTCCGGAGTGGTTCTG ATGAACGACATCCGCAAGAAGGGTAGCAGCGACGTCTACCCGGTGGGCCC ATTTCTCTTCGGAGTGGTGCTGACCGTTCTCAGCTTGAAGCTGGCCAACA TTATGAATGATGCTGCCATGATCAATACGAATTTAATCGGCCTGGTGATA AACTTCGTCTTCCTCTTCGGATTTTACTACTACGCCTCGAGCGCCAGCAG GAGCAAGATCTGGAAGCAGATTGGCTATTCCTCGGTGTTCCTATTGGCCA TCACCGCGTATGCCAACTTCGAGGATCCCGCCAAGATTGAGTTCCGCCTG GGAATGCTGATCACCGGCATCCTGGTTTGGATGGTGGGCTCTCCCCTGCT GCATCTGCCGAAAATCATTGAGAAGAAGAGCACCGAGGGAATGCCGTTCC CGATTATCTTTGCCGGTAATCTGGTGGCATTTTCCTGGACGCTGTATGCC ATCTCCATCAAGAATACTGTGATGGTGCTGCAGAACCTTTTGCTGCTGGT CCTGGGCGGCATTCAGCTCTCCATGTTCGCTATTTATCCCAACAAACCGG CTGCCGAGAAGCCCAAGGACAGCAAGAAGGACAAATAATTGAAATCGAAC GCTTTACCTAGAAAAAAGGACAAATAATGGGTTGTTGCAACAACATTACC AAGTAATAAGTAGCTAGGCTTTGAGGAATAATCAAATTATTGCTTGAATT TACACTAAACCGCCACAAGAAAACTAAATTTGAGCTAAACGAATTATTTT TCTATATAGGAAATATTTTCTTAGAACAAATCCAGCTAACTAAGTTGCTA GCTAACCTAGAATTGTTATTATATTGACTATTATTGTATATAACTACTAC ATACTTGCAATTTTTGACAATAATTCAAATCTTCCAAATGCATACGTATT TATAAAGTCAACATAATATGTAATAAAACAATCTGTTACAAAAAAAAAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7272-RA | 1238 | CG7272-RA | 45..1237 | 1..1193 | 5965 | 100 | Plus |
CG7272.b | 1183 | CG7272.b | 1..1183 | 1..1189 | 5830 | 99.4 | Plus |
CG7272.a | 1070 | CG7272.a | 203..1070 | 322..1189 | 4340 | 100 | Plus |
CG7272.a | 1070 | CG7272.a | 1..203 | 1..203 | 1015 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 15493259..15493721 | 727..1189 | 2315 | 100 | Plus |
chr3L | 24539361 | chr3L | 15492789..15493194 | 322..727 | 2030 | 100 | Plus |
chr3L | 24539361 | chr3L | 15490892..15491213 | 1..322 | 1610 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 15503307..15503773 | 727..1193 | 2335 | 100 | Plus |
3L | 28110227 | 3L | 15502837..15503242 | 322..727 | 2030 | 100 | Plus |
3L | 28110227 | 3L | 15500940..15501261 | 1..322 | 1610 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 15496407..15496873 | 727..1193 | 2335 | 100 | Plus |
3L | 28103327 | 3L | 15495937..15496342 | 322..727 | 2030 | 100 | Plus |
3L | 28103327 | 3L | 15494040..15494361 | 1..322 | 1610 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 15490892..15491212 | 1..321 | 100 | -> | Plus |
chr3L | 15492789..15493194 | 322..727 | 100 | -> | Plus |
chr3L | 15493260..15493721 | 728..1189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7272-RA | 1..687 | 152..838 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7272-RA | 1..687 | 152..838 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7272-RA | 1..687 | 152..838 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7272-RA | 1..687 | 152..838 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7272-RA | 1..687 | 152..838 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7272-RA | 1..1189 | 1..1189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7272-RA | 1..1189 | 1..1189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7272-RA | 3..1191 | 1..1189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7272-RA | 1..1189 | 1..1189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7272-RA | 3..1191 | 1..1189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15500940..15501260 | 1..321 | 100 | -> | Plus |
3L | 15502837..15503242 | 322..727 | 100 | -> | Plus |
3L | 15503308..15503769 | 728..1189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15500940..15501260 | 1..321 | 100 | -> | Plus |
3L | 15502837..15503242 | 322..727 | 100 | -> | Plus |
3L | 15503308..15503769 | 728..1189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15500940..15501260 | 1..321 | 100 | -> | Plus |
3L | 15502837..15503242 | 322..727 | 100 | -> | Plus |
3L | 15503308..15503769 | 728..1189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 15494040..15494360 | 1..321 | 100 | -> | Plus |
arm_3L | 15495937..15496342 | 322..727 | 100 | -> | Plus |
arm_3L | 15496408..15496869 | 728..1189 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15494040..15494360 | 1..321 | 100 | -> | Plus |
3L | 15495937..15496342 | 322..727 | 100 | -> | Plus |
3L | 15496408..15496869 | 728..1189 | 100 | Plus |
Translation from 0 to 837
> RE57663.hyp LSICSFVVTAAASRSLVFVFVHLFILARHSAPLPFPHNPFERHQLRVIEI MEALGDLLAPHSELIAKVAGTITTLQFLSGVVLMNDIRKKGSSDVYPVGP FLFGVVLTVLSLKLANIMNDAAMINTNLIGLVINFVFLFGFYYYASSASR SKIWKQIGYSSVFLLAITAYANFEDPAKIEFRLGMLITGILVWMVGSPLL HLPKIIEKKSTEGMPFPIIFAGNLVAFSWTLYAISIKNTVMVLQNLLLLV LGGIQLSMFAIYPNKPAAEKPKDSKKDK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7272-PA | 228 | CG7272-PA | 1..228 | 51..278 | 1144 | 100 | Plus |
slv-PC | 226 | CG8717-PC | 6..208 | 61..263 | 212 | 27.2 | Plus |
slv-PB | 226 | CG8717-PB | 6..208 | 61..263 | 212 | 27.2 | Plus |
slv-PA | 226 | CG8717-PA | 6..208 | 61..263 | 212 | 27.2 | Plus |
Translation from 151 to 837
> RE57663.pep MEALGDLLAPHSELIAKVAGTITTLQFLSGVVLMNDIRKKGSSDVYPVGP FLFGVVLTVLSLKLANIMNDAAMINTNLIGLVINFVFLFGFYYYASSASR SKIWKQIGYSSVFLLAITAYANFEDPAKIEFRLGMLITGILVWMVGSPLL HLPKIIEKKSTEGMPFPIIFAGNLVAFSWTLYAISIKNTVMVLQNLLLLV LGGIQLSMFAIYPNKPAAEKPKDSKKDK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23701-PA | 228 | GF23701-PA | 1..218 | 1..218 | 997 | 89.4 | Plus |
Dana\GF11215-PA | 226 | GF11215-PA | 6..210 | 11..215 | 185 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15900-PA | 228 | GG15900-PA | 1..214 | 1..214 | 944 | 93.5 | Plus |
Dere\GG10680-PA | 226 | GG10680-PA | 6..210 | 11..215 | 196 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13950-PA | 232 | GH13950-PA | 1..227 | 1..227 | 810 | 65.2 | Plus |
Dgri\GH14541-PA | 232 | GH14541-PA | 1..227 | 1..227 | 806 | 64.8 | Plus |
Dgri\GH19991-PA | 225 | GH19991-PA | 5..209 | 11..215 | 210 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7272-PA | 228 | CG7272-PA | 1..228 | 1..228 | 1144 | 100 | Plus |
slv-PC | 226 | CG8717-PC | 6..208 | 11..213 | 212 | 27.2 | Plus |
slv-PB | 226 | CG8717-PB | 6..208 | 11..213 | 212 | 27.2 | Plus |
slv-PA | 226 | CG8717-PA | 6..208 | 11..213 | 212 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13112-PA | 230 | GI13112-PA | 1..220 | 1..221 | 860 | 74.2 | Plus |
Dmoj\GI20166-PA | 227 | GI20166-PA | 5..209 | 11..215 | 191 | 26.6 | Plus |
Dmoj\GI21453-PA | 219 | GI21453-PA | 1..207 | 1..217 | 159 | 24.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24812-PA | 231 | GL24812-PA | 1..214 | 1..214 | 924 | 91.1 | Plus |
Dper\GL10598-PA | 225 | GL10598-PA | 7..209 | 13..215 | 201 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20227-PA | 231 | GA20227-PA | 1..214 | 1..214 | 924 | 91.1 | Plus |
Dpse\GA21278-PA | 226 | GA21278-PA | 7..210 | 13..215 | 179 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25529-PA | 228 | GM25529-PA | 1..228 | 1..228 | 1153 | 98.2 | Plus |
Dsec\GM20727-PA | 226 | GM20727-PA | 6..210 | 11..215 | 197 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14544-PA | 228 | GD14544-PA | 1..228 | 1..228 | 1154 | 98.2 | Plus |
Dsim\GD10194-PA | 226 | GD10194-PA | 6..210 | 11..215 | 197 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13859-PA | 229 | GJ13859-PA | 1..229 | 1..228 | 859 | 72.6 | Plus |
Dvir\GJ20230-PA | 225 | GJ20230-PA | 5..209 | 11..215 | 181 | 25.1 | Plus |
Dvir\GJ16474-PA | 220 | GJ16474-PA | 1..186 | 1..195 | 142 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20413-PA | 231 | GK20413-PA | 1..230 | 1..227 | 963 | 80.9 | Plus |
Dwil\GK23163-PA | 226 | GK23163-PA | 6..210 | 11..215 | 194 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22241-PA | 228 | GE22241-PA | 1..228 | 1..228 | 1130 | 96.1 | Plus |
Dyak\GE23145-PA | 228 | GE23145-PA | 1..218 | 1..218 | 998 | 95.9 | Plus |
Dyak\GE23345-PA | 226 | GE23345-PA | 6..210 | 11..215 | 209 | 27.4 | Plus |