BDGP Sequence Production Resources |
Search the DGRC for RE57682
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 576 |
Well: | 82 |
Vector: | pFlc-1 |
Associated Gene/Transcript | insb-RA |
Protein status: | RE57682.pep: gold |
Preliminary Size: | 531 |
Sequenced Size: | 866 |
Gene | Date | Evidence |
---|---|---|
CG6520 | 2001-12-14 | Blastp of sequenced clone |
CG6520 | 2002-01-01 | Sim4 clustering to Release 2 |
CG6520 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6520 | 2008-04-29 | Release 5.5 accounting |
CG6520 | 2008-08-15 | Release 5.9 accounting |
CG6520 | 2008-12-18 | 5.12 accounting |
866 bp (866 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071537
> RE57682.complete AGGTGGCGATCGCCAGGTGAACGAAGGTTGTGTCGCGCAGGAGCGAGTTG GAAAACCAAACGATTGCAGCTTAAGTCTAGTAGATCATCCTCTAAGCATG TCGGGCAAACTGATCATGAAGCGCAAGCGAGCCAGCCAGGAGGAGCAGCA GCAGGCGCAGGAGCAACGTGTCCAGCCGCAGGAACAGCAACAGGAGCAGC AACCGACTGAAGCGGTTCCGGAGAAACGCCATCGTCCTCTAACTCCACCA GCAGAAGAGCCAGGGCAGAATTGCCCCAACCCGCCAGATGCCCCCAATCG AATCCTTCTGGAAGCGCTGCAAAAAATAATGGAGCTGCAAGCGGAGCTGG ATGCCTTTGAGCAGGATCTAAACGATCGAGATGGCTATGCGGCTGCCGGA GCTGAAGCGGAGGATGTTGAGGAAAGTGACGAGGATGCCGAGGTGGCGGC CCAGTTTGCGCCACCGACGCCAGCCCAAAGGAGTCAGGCGGAGGCACTGG GTTTTGCCATGTGTGCCAGAGAAACATTGCTGTTTCTGCAGAGCGAGGGA ATACCCACGGAGTCGCCACTCTACCAGACTCTCCTTGGGAAATTGGTTGG GCAAAGCGATGGACTTCTGCACGCCTGAGAGCAAACCGGAGGGCAGGAAC TCCTCCTCATTCTAGTCACTTTGCTGCGATCTCATTGCAAGTAAAACGAG AGAGAGAAACCAAGGGTTGCGAACTTTCCGGGGGTGGAAATTATGCAACA CAGGGATCTGGGTATTCCTAAGCTATTTACTCTAGTCAATTATTGTAAAG CAATATAAAACACATAAGCAACAACGAAATAAATTATGTATATTGAAAGT AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6520-RA | 864 | CG6520-RA | 1..852 | 3..854 | 4260 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 13362264..13363123 | 850..3 | 4025 | 98.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 17475210..17476061 | 854..3 | 4260 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 17476409..17477260 | 854..3 | 4260 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\INE-1 | 1467 | Dbuz\INE-1 ISBU1 1467bp | 169..213 | 796..840 | 108 | 71.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 13362264..13363123 | 1..850 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6520-RA | 1..531 | 98..628 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6520-RA | 1..531 | 98..628 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6520-RA | 1..531 | 98..628 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6520-RA | 1..531 | 98..628 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
insb-RA | 1..531 | 98..628 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6520-RA | 1..848 | 3..850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6520-RA | 1..848 | 3..850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6520-RA | 3..854 | 1..850 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6520-RA | 1..848 | 3..850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
insb-RA | 3..854 | 1..850 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17475214..17476061 | 1..850 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17475214..17476061 | 1..850 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17475214..17476061 | 1..850 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 13362719..13363566 | 1..850 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17476413..17477260 | 1..850 | 99 | Minus |
Translation from 4 to 627
> RE57682.hyp GDRQVNEGCVAQERVGKPNDCSLSLVDHPLSMSGKLIMKRKRASQEEQQQ AQEQRVQPQEQQQEQQPTEAVPEKRHRPLTPPAEEPGQNCPNPPDAPNRI LLEALQKIMELQAELDAFEQDLNDRDGYAAAGAEAEDVEESDEDAEVAAQ FAPPTPAQRSQAEALGFAMCARETLLFLQSEGIPTESPLYQTLLGKLVGQ SDGLLHA*
Translation from 97 to 627
> RE57682.pep MSGKLIMKRKRASQEEQQQAQEQRVQPQEQQQEQQPTEAVPEKRHRPLTP PAEEPGQNCPNPPDAPNRILLEALQKIMELQAELDAFEQDLNDRDGYAAA GAEAEDVEESDEDAEVAAQFAPPTPAQRSQAEALGFAMCARETLLFLQSE GIPTESPLYQTLLGKLVGQSDGLLHA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11782-PA | 175 | GF11782-PA | 1..175 | 1..176 | 554 | 77.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22193-PA | 181 | GG22193-PA | 1..181 | 1..176 | 603 | 83.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20484-PA | 172 | GH20484-PA | 1..172 | 1..176 | 410 | 52.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
insb-PB | 176 | CG6520-PB | 1..176 | 1..176 | 899 | 100 | Plus |
insb-PA | 176 | CG6520-PA | 1..176 | 1..176 | 899 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21027-PA | 172 | GI21027-PA | 1..172 | 1..176 | 456 | 60.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10661-PA | 190 | GL10661-PA | 1..190 | 1..176 | 568 | 67.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19659-PA | 189 | GA19659-PA | 1..189 | 1..176 | 566 | 68.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19979-PA | 180 | GM19979-PA | 1..180 | 1..176 | 623 | 87.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25475-PA | 180 | GD25475-PA | 1..180 | 1..176 | 843 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21954-PA | 168 | GJ21954-PA | 1..168 | 1..176 | 467 | 62.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23299-PA | 173 | GK23299-PA | 1..173 | 1..176 | 358 | 56.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14188-PA | 174 | GE14188-PA | 1..174 | 1..176 | 574 | 82.7 | Plus |