BDGP Sequence Production Resources |
Search the DGRC for RE57705
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 577 |
Well: | 5 |
Vector: | pFlc-1 |
Associated Gene/Transcript | wntD-RA |
Protein status: | RE57705.pep: gold |
Preliminary Size: | 930 |
Sequenced Size: | 1163 |
Gene | Date | Evidence |
---|---|---|
CG8458 | 2001-12-14 | Blastp of sequenced clone |
CG8458 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8458 | 2003-01-01 | Sim4 clustering to Release 3 |
wntD | 2008-04-29 | Release 5.5 accounting |
wntD | 2008-08-15 | Release 5.9 accounting |
wntD | 2008-12-18 | 5.12 accounting |
1163 bp (1163 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071538
> RE57705.complete ATTCAGTCGATCTAACGACATCGCAGAGATAGCACCATAACAACAATATA AACAGACAACATGATTTTTGCCATCACATTCTTCATGGGTATTACGAGCA CTCTGGCAGCAGTTTTGGAGCCCATGAGCTACTACCAGTACACCCAGTTC CAGGCACCACTCTCCTGGGAGGATATAACCGGCAAGGGGCTGAAACAGGC CCTCGACAGCTGCCAACAGAGTTTCCAGTGGCAGCGATGGAACTGTCCGA GCCAGGATTTCGTGCAGAAGAATTCCAAGCCGGAGGAAAACTCACCAAAT CGGGAGGATGTCTATGTGGCGGCCATTTCCATGGCAGCCATAGTCCATAC TCTGACCAAGGACTGTGCCAATGGAGTAATCGCCGGATGCGGATGCACGG AAAATGCTCTGAATGTACCCTGTGCCCACGAACCCACCAAGGCACTGGAG CAGTACGAGAAGCATTTCGGATCGGGATCAGGAGCCATCGGTCACAATCG ACGGGTGGTGGGAGCTCTACTACAAAGATCACTGGAACAGGAATGCCGGT GCAAGCAACCAGGAGCTGTGCAGGGTGAATGCCAGGAGGAGGAGTGTGTG GCGGTACTAAAGCCATTCGAAGCCATTGCCCAGGATCTCCTCCAAATGTA CGACGATGCCATCCAACTAGAAGGAGCCAGTAGCAATCTAAAGATTATGT GGCAGAACATTCCCCTAGACTCGCTGGTCTTCATGCAGGACTCGCCCAAC TACTGCGAACGCGATGCCACCGGATTGTGGAAAGGAACACGGGGTCGCCA GTGCTCCAAGGATGGCAGTGGTTCTCTGGAGGAACGCCTCTCCTGCCAGC AGTTGTGCCGCGTGTGCGGATACCGAGTGAGATCCCAGCACGTGAGAACC GAGAGGAGGTGCAATTGCAAGCTGGTCTGGGGATTCCGACTCCAGTGCGA TGTGTGCGTCCAGCTGGAAAGGCAGTACTCCTGCTACTAAATGGATGCTC CACTGGAAATGGAATCCAGGATTGGGGCGCTGGTCGAGTCCCACGAAAAC TGTTTACCTACATTTAAGTTAATTTATTTGATTCCACCTCTAATTTATTA CCACAACAAATGCTATCAATAAATACGTTATTTAACATATATCATGCAAA AAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
wntD-RA | 1147 | wntD-RA | 1..1147 | 1..1147 | 5735 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 9117217..9118363 | 1147..1 | 5735 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 13292051..13293198 | 1148..1 | 5740 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 13032882..13034029 | 1148..1 | 5740 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 9117217..9118363 | 1..1147 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wntD-RA | 1..930 | 61..990 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wntD-RA | 1..930 | 61..990 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wntD-RA | 1..930 | 61..990 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wntD-RA | 1..930 | 61..990 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wntD-RA | 1..930 | 61..990 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wntD-RA | 1..1147 | 1..1147 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wntD-RA | 1..1147 | 1..1147 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wntD-RA | 1..1147 | 1..1147 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wntD-RA | 1..1147 | 1..1147 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wntD-RA | 1..1147 | 1..1147 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13292052..13293198 | 1..1147 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13292052..13293198 | 1..1147 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13292052..13293198 | 1..1147 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 9117774..9118920 | 1..1147 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13032883..13034029 | 1..1147 | 100 | Minus |
Translation from 60 to 989
> RE57705.pep MIFAITFFMGITSTLAAVLEPMSYYQYTQFQAPLSWEDITGKGLKQALDS CQQSFQWQRWNCPSQDFVQKNSKPEENSPNREDVYVAAISMAAIVHTLTK DCANGVIAGCGCTENALNVPCAHEPTKALEQYEKHFGSGSGAIGHNRRVV GALLQRSLEQECRCKQPGAVQGECQEEECVAVLKPFEAIAQDLLQMYDDA IQLEGASSNLKIMWQNIPLDSLVFMQDSPNYCERDATGLWKGTRGRQCSK DGSGSLEERLSCQQLCRVCGYRVRSQHVRTERRCNCKLVWGFRLQCDVCV QLERQYSCY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17394-PA | 310 | GF17394-PA | 1..310 | 1..309 | 1341 | 79.4 | Plus |
Dana\GF12469-PA | 352 | GF12469-PA | 55..351 | 41..308 | 218 | 27.5 | Plus |
Dana\GF14030-PA | 544 | GF14030-PA | 275..543 | 47..308 | 157 | 23.2 | Plus |
Dana\GF13958-PA | 149 | GF13958-PA | 68..148 | 222..308 | 144 | 35.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17065-PA | 309 | GG17065-PA | 1..309 | 1..309 | 1636 | 97.7 | Plus |
Dere\GG24078-PA | 352 | GG24078-PA | 55..351 | 41..308 | 210 | 27.8 | Plus |
Dere\GG23540-PA | 549 | GG23540-PA | 280..548 | 47..308 | 164 | 23.6 | Plus |
Dere\GG18113-PA | 999 | GG18113-PA | 857..998 | 162..308 | 160 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19146-PA | 314 | GH19146-PA | 1..314 | 1..309 | 1153 | 67.6 | Plus |
Dgri\GH19925-PA | 345 | GH19925-PA | 55..344 | 41..308 | 228 | 28.1 | Plus |
Dgri\GH13724-PA | 472 | GH13724-PA | 83..275 | 42..208 | 150 | 23.5 | Plus |
Dgri\GH21730-PA | 991 | GH21730-PA | 849..990 | 162..308 | 150 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
wntD-PA | 309 | CG8458-PA | 1..309 | 1..309 | 1673 | 100 | Plus |
Wnt2-PB | 325 | CG1916-PB | 28..324 | 41..308 | 273 | 27.3 | Plus |
Wnt2-PA | 352 | CG1916-PA | 55..351 | 41..308 | 273 | 27.3 | Plus |
Wnt4-PB | 539 | CG4698-PB | 270..538 | 47..308 | 190 | 24.6 | Plus |
Wnt4-PA | 539 | CG4698-PA | 270..538 | 47..308 | 190 | 24.6 | Plus |
Wnt5-PB | 1004 | CG6407-PB | 845..1003 | 145..308 | 184 | 27.4 | Plus |
Wnt5-PA | 1004 | CG6407-PA | 845..1003 | 145..308 | 184 | 27.4 | Plus |
Wnt6-PC | 420 | CG4969-PC | 226..419 | 111..308 | 156 | 24.5 | Plus |
Wnt6-PB | 420 | CG4969-PB | 226..419 | 111..308 | 156 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23253-PA | 311 | GI23253-PA | 22..311 | 20..309 | 1181 | 72.5 | Plus |
Dmoj\GI19882-PA | 344 | GI19882-PA | 55..343 | 41..308 | 226 | 29.1 | Plus |
Dmoj\GI18872-PA | 988 | GI18872-PA | 829..987 | 145..308 | 156 | 26.7 | Plus |
Dmoj\GI23655-PA | 473 | GI23655-PA | 83..285 | 42..219 | 148 | 23.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23072-PA | 308 | GL23072-PA | 1..308 | 1..309 | 1346 | 78.3 | Plus |
Dper\GL16238-PA | 379 | GL16238-PA | 237..378 | 162..308 | 153 | 27.8 | Plus |
Dper\GL18899-PA | 468 | GL18899-PA | 84..276 | 42..208 | 151 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21093-PA | 308 | GA21093-PA | 1..308 | 1..309 | 1354 | 79 | Plus |
Dpse\GA24226-PA | 353 | GA24226-PA | 55..352 | 41..308 | 205 | 26.9 | Plus |
Dpse\wg-PA | 468 | GA18504-PA | 84..276 | 42..208 | 151 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25950-PA | 309 | GM25950-PA | 1..309 | 1..309 | 1633 | 97.7 | Plus |
Dsec\GM21127-PA | 352 | GM21127-PA | 55..351 | 41..308 | 207 | 27.5 | Plus |
Dsec\GM22805-PA | 303 | GM22805-PA | 161..302 | 162..308 | 159 | 29.1 | Plus |
Dsec\GM13583-PA | 539 | GM13583-PA | 270..538 | 47..308 | 153 | 23.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20509-PA | 309 | GD20509-PA | 1..309 | 1..309 | 1644 | 98.4 | Plus |
Dsim\GD22501-PA | 539 | GD22501-PA | 270..538 | 47..308 | 163 | 23.6 | Plus |
Dsim\GD15629-PA | 969 | GD15629-PA | 827..968 | 162..308 | 161 | 29.1 | Plus |
Dsim\GD10659-PA | 324 | GD10659-PA | 55..323 | 41..308 | 151 | 26 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10750-PA | 311 | GJ10750-PA | 21..311 | 19..309 | 1196 | 74 | Plus |
Dvir\GJ15051-PA | 343 | GJ15051-PA | 55..342 | 41..308 | 210 | 27.6 | Plus |
Dvir\GJ17616-PA | 548 | GJ17616-PA | 281..547 | 47..308 | 161 | 22.7 | Plus |
Dvir\GJ21907-PA | 414 | GJ21907-PA | 255..413 | 145..308 | 157 | 26.2 | Plus |
Dvir\wg-PA | 472 | GJ20848-PA | 83..275 | 42..208 | 150 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13358-PA | 309 | GK13358-PA | 1..309 | 2..309 | 1270 | 75.5 | Plus |
Dwil\GK15749-PA | 356 | GK15749-PA | 55..355 | 41..308 | 160 | 24.7 | Plus |
Dwil\GK24728-PA | 547 | GK24728-PA | 282..546 | 51..308 | 159 | 23.9 | Plus |
Dwil\GK21945-PA | 997 | GK21945-PA | 838..996 | 145..308 | 156 | 25.6 | Plus |
Dwil\wg-PA | 477 | GK24298-PA | 84..286 | 42..219 | 149 | 23.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24455-PA | 309 | GE24455-PA | 1..309 | 1..309 | 1628 | 97.4 | Plus |
Dyak\GE19281-PA | 352 | GE19281-PA | 55..351 | 41..308 | 206 | 27.5 | Plus |
Dyak\GE15518-PA | 1003 | GE15518-PA | 861..1002 | 162..308 | 165 | 29.8 | Plus |
Dyak\GE18366-PA | 550 | GE18366-PA | 281..549 | 47..308 | 163 | 23.6 | Plus |
Translation from 60 to 989
> RE57705.hyp MIFAITFFMGITSTLAAVLEPMSYYQYTQFQAPLSWEDITGKGLKQALDS CQQSFQWQRWNCPSQDFVQKNSKPEENSPNREDVYVAAISMAAIVHTLTK DCANGVIAGCGCTENALNVPCAHEPTKALEQYEKHFGSGSGAIGHNRRVV GALLQRSLEQECRCKQPGAVQGECQEEECVAVLKPFEAIAQDLLQMYDDA IQLEGASSNLKIMWQNIPLDSLVFMQDSPNYCERDATGLWKGTRGRQCSK DGSGSLEERLSCQQLCRVCGYRVRSQHVRTERRCNCKLVWGFRLQCDVCV QLERQYSCY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
wntD-PA | 309 | CG8458-PA | 1..309 | 1..309 | 1673 | 100 | Plus |
Wnt2-PB | 325 | CG1916-PB | 28..324 | 41..308 | 273 | 27.3 | Plus |
Wnt2-PA | 352 | CG1916-PA | 55..351 | 41..308 | 273 | 27.3 | Plus |
Wnt4-PB | 539 | CG4698-PB | 270..538 | 47..308 | 190 | 24.6 | Plus |
Wnt4-PA | 539 | CG4698-PA | 270..538 | 47..308 | 190 | 24.6 | Plus |