Clone RE58280 Report

Search the DGRC for RE58280

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:582
Well:80
Vector:pFlc-1
Associated Gene/TranscriptnonA-RA
Protein status:RE58280.pep: gold
Sequenced Size:3783

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4211 2002-01-01 Sim4 clustering to Release 2
CG4211 2002-06-07 Blastp of sequenced clone
CG4211 2003-01-01 Sim4 clustering to Release 3
nonA 2008-04-29 Release 5.5 accounting
nonA 2008-08-15 Release 5.9 accounting
nonA 2008-12-18 5.12 accounting

Clone Sequence Records

RE58280.complete Sequence

3783 bp (3783 high quality bases) assembled on 2002-06-07

GenBank Submission: AY119651

> RE58280.complete
ATTGGGTCACCACCTATGCTGTGTACGTATAATACGTTTATCTGCTTTGT
TCCATTACATTCAGTTTTTCGATTTTGACGACGGTTGTCAACGAGTTGTA
GCAAGCACATTTTAATAAAGCGAAAGGAAATAATAATATTTAAAAAATGG
AAAGTGCGGGGAAACAAGATAATAACGCCACGCAACAGTTGCCGCAGCGA
CAGCAGCGGGGAAACCAGCAGGCCAACAAAAATCTCGGCAAGCATAATGC
ACAAAAACAAAATGATTCCGCGGACGGAGGCCCGGCTGAAAAGAAGCAAC
GATTCGGTGGTCCAAATGCCCAGAATCAAAACCAGAACCAGAATCAAAAT
GGTGGTGTAACGGGCGGTGGTGGTGCAGTTGGTGGCCCCAATCAAAATAA
GAATTTTGGAAACAACAAGGGTGGGTTCGTTGGAAACCGCAATCGCAACA
ATAATCGCGCTGGAAACCAAAACCGGACTTTTCCAGGCAACAACAATCCA
AATCAAAAGCCCAATAACGAAACATCAAAGGCGGACGGCCCTAATGCACT
TGCTAAGAACAATGAACCGGCAACTGCAGCTGCTGGCCAAAATCAAGCGA
ATCAGAACGCCAACAAGGGCCAAAATCAACGGCAAGGACAAAACCAAAAT
CAAAATCAAGTCCATGGTCAAGGAAATCAAGGAGGACCAGGAAATCAAGG
GGGAGCAGGCAATCAAGGAGGCCAAGGAAATCAAGGAGGAGCCGGAAATC
AGGGAAATGGTCAAGGATTCAGAGGTCGCAATGCTGGTAACAATCAAGGT
GGCGGTTTCTCCGGAGGTCCGCAGAACCAGCAGCGTGACAACCGAAACCG
GAGTGGTCCACGCCCTGGCGGAGGTGCTGGTGGCGCGATGAACAGCACCA
ATATGGGTGGTGGTGGTGGTGGCGGTGGAGGCGGTGGTCCGCGCGGCGGT
GAAGACTTCTTCATTACCCAGCGGTTACGCAGCATTTCTGGGCCCACCTT
TGAACTGGAACCGGTGGAAGTGCCCACGGAGACGAAGTTCTCTGGACGAA
ATCGTCTCTATGTGGGCAACCTGACCAATGACATCACCGACGATGAGCTG
CGCGAGATGTTCAAGCCATATGGCGAGATTAGCGAGATCTTCTCGAACCT
GGATAAGAACTTTACATTCCTAAAGGTCGACTATCATCCCAATGCCGAGA
AGGCTAAACGCGCCCTGGACGGATCGATGCGAAAGGGTCGCCAGTTGCGT
GTACGATTCGCACCGAATGCCACCATTTTGCGGGTGAGCAATCTCACACC
GTTCGTTTCCAACGAGCTGCTGTACAAGTCTTTCGAAATCTTTGGTCCCA
TCGAGAGGGCCAGCATCACCGTCGACGATCGTGGCAAGCATATGGGCGAG
GGCATAGTTGAGTTTGCCAAAAAGTCATCGGCCAGCGCCTGTCTGCGGAT
GTGCAATGAGAAGTGCTTCTTCCTGACTGCTTCCCTTCGACCGTGTCTGG
TTGATCCGATGGAGGTGAATGACGATACCGACGGACTGCCGGAGAAGGCG
TTCAACAAAAAGATGCCCGACTTCAACCAGGAGCGTAGCATTGGTCCGCG
CTTCGCCGATCCCAATTCGTTTGAGCACGAGTACGGTTCGCGCTGGAAGC
AGCTGCACAATTTGTTCAAAACCAAGCAGGACGCGCTCAAACGCGAACTG
AAAATGGAGGAGGACAAGTTGGAGGCTCAGATGGAGTATGCACGCTATGA
GCAAGAAACTGAACTGTTGCGTCAAGAGCTGCGAAAACGCGAAGTTGACA
ACGAGCGCAAGAAATTGGAGTGGGAGATGCGCGAGAAGCAGGCCGAGGAG
ATGCGCAAGCGCGAGGAGGAGACCATGCGACGTCATCAGACCGAGATGCA
GAGCCACATGAATCGCCAGGAGGAGGACATGCTCCGTCGGCAGCAGGAGA
CACTGTTCATGAAGGCACAGCAGCTCAATTCGTTGCTGGATCAGCAGGAG
GGATTTGGTGGCGGCGGCGGCGGTAACAACTCCACTTTTGACAACTTCGC
TGGCAATAGCAATTCGCCATTCGAGGTTTTTAGAGGCAATAACAATAACA
ATTCCACAATGATTGGAAACAATGCTGCCCCCAACACACAGGACTCCTTC
GCTTTTGAATTTGGGGTTAACAATATGAACCAAGGCGGCAATCAACGTGG
AAATAATGGCGGAGGAAATAATGTCCCATGGGGACGTCGACGTTTTTAGA
CACTGGATCGATCGAACAATATACATACATATAAGGATGAGATTTGACGT
ACTCTCAAATATTTGATTGCGTTTCACATTTTAACTTGGCTCGCTAGTGC
GCGCGATCAGAATGAACTTGCTTAAAAGGATCCCTTTTTATCGCATGCAC
CCAAATATGTTTTGATTTAATATTTGGTCAATTATTATCAATCGTCTATC
GATCCTAAAATTTTAAGAGTAATGACACGCAAAGGATGAACCTTACAAAA
ATAATAGTATACAATCTGAATCCCAAAATGAATGTGCAACAATGCTGCAC
CGAAAAGAAAAACGAAATCATTGCGTACATATACTTAATCATAACGATAA
TTTAAGATTATGTATGCGGCGAACTACATTCTCCAGTAATTTAATTCTTT
TTTGTCCACCATACAAATTAAATATACATAAAGATATATTCCAAATCGAT
TTATTTGAACATGAAAAACGCAATATTAATTCAAAAGAAAAGAAAAGAAA
AAGAAAGTTAAGAACACTTCGAGAATCTGGTGAGTATTCCGGATGAGCGC
ATGGACTTGATCTGGATCTTGGTCTGGATATCTCATCTCATTCGATGTCC
ACTAATGGATGATCCTTCTGTTGTGCAGAACTATTCTAAGCTTTCCCACT
ATTTTGTTAATGATTAACAAATAAAATGATTAACAACTTTTTTTTCTGGC
TGTAGTCGAATCGCAACTCAATTTTTTTTTTTATTCAGTCTAAATAATGT
TTTTATTTTTCTTCATATGTTTTAGTATCTATTTCAAGTATTTATCGGAA
GAATTAAATTAATTTCGGTAATATGACATGTGTAAAATTTTGTGTAATTT
TCATTTTTTTTTTTTACATTTTGTCTTTTACCCCTTTGTTTTTTGTAAAA
TATTCTTGCTATTTTGTATTTGATAGTAATATTTAACGGAATTGCATATC
TTATCTAATATGTAATTTTCGGGAAATGATATTCGATTTTGGGAAAAATG
CAAGGGAAAATCATTCAAACGCTAGTGTATTTTGGATATACATTTCTCAC
CGATTTTGGATATTATCTCAAGTACAACATTATTTAGGATAGATTTTGAT
AGTTTTACGCCGTTTTCTTGCAATGAAACCGACAATCTCAGACTTTGACC
AAAATTTGATGAATAATACTTTGTGTTTTATACCCGTATACCTTTCATGT
TGCATAAATATACATTGGCATACCTACAAAGCAACAAATTTAAATGTAGT
TGTAATTAATTGTCATGCTAATAATTTAATTATACTTATATAAATATATA
TATATTAGTATGTTCAAAATACTACTACTTTAATCAAACAAATATGGCAC
TTTGAAAGCAAACATAAAATATTTACATTTTGATCAGTTCTGGGTGTTGG
CACCGAAAATTAATTTTAGTAAATTAATAAACAATTCGAAGTGTATAGAA
TATCTTTAATTTTTTTCAATTTTGATGCAAATGAAAAATAAACGGAAATT
GACTTCCAAATGCGAAGAAAAAAAAAAAAAAAA

RE58280.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:52:44
Subject Length Description Subject Range Query Range Score Percent Strand
nonA-RA 3945 nonA-RA 82..3847 1..3766 18800 99.9 Plus
nonA-RB 2472 nonA-RB 82..2224 1..2143 10700 99.9 Plus
nonA-RC 5206 nonA-RC 82..2223 1..2142 10695 99.9 Plus
nonA-RC 5206 nonA-RC 3482..5108 2140..3766 8120 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 03:42:06
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 16256616..16258240 2140..3766 7960 99.6 Plus
chrX 22417052 chrX 16253074..16254346 504..1776 6305 99.7 Plus
chr2R 21145070 chr2R 618080..618825 1243..504 2570 90.9 Minus
chrX 22417052 chrX 16251267..16251769 1..503 2470 99.4 Plus
chr3L 24539361 chr3L 24523560..24524014 546..1005 1695 92.6 Plus
chrX 22417052 chrX 16254919..16255230 1775..2086 1560 100 Plus
chr3R 27901430 chr3R 12465691..12466499 1059..1870 1505 79.3 Plus
chr2R 21145070 chr2R 619096..619496 1354..1776 1160 87.6 Plus
chr3L 24539361 chr3L 24524024..24524339 1180..1511 1155 91.3 Plus
chr3L 24539361 chr3L 24522994..24523277 193..503 855 86.5 Plus
chr3LHet 2555433 chr3LHet 33331..33454 351..475 470 93.6 Plus
chr3LHet 2555433 chr3LHet 33486..33578 554..652 325 90.9 Plus
chrX 22417052 chrX 16255301..16255359 2084..2142 295 100 Plus
chr3LHet 2555433 chr3LHet 33220..33282 22..84 270 95.2 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed 2010-04-22 21:05:49
Subject Length Description Subject Range Query Range Score Percent Strand
CR41440-RA 398 CR41440-RA 1..169 1356..1523 670 94 Plus
CR41440-RA 398 CR41440-RA 176..359 1542..1724 665 92.4 Plus
CR41440-RA 398 CR41440-RA 355..398 1732..1775 190 95.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 03:42:03
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16366902..16368528 2140..3766 8120 99.9 Plus
X 23542271 X 16363358..16364630 504..1776 6365 100 Plus
2R 25286936 2R 4730496..4731241 1243..504 2570 90.9 Minus
X 23542271 X 16361552..16362054 1..503 2500 99.8 Plus
3L 28110227 3L 24534656..24535110 546..1005 1695 92.6 Plus
X 23542271 X 16365203..16365514 1775..2086 1560 100 Plus
3R 32079331 3R 16641129..16641937 1059..1870 1505 79.3 Plus
2R 25286936 2R 4731512..4731912 1354..1776 1160 87.6 Plus
3L 28110227 3L 24535120..24535435 1180..1511 1155 91.3 Plus
3L 28110227 3L 24534090..24534373 193..503 855 86.5 Plus
Y 3667352 Y 691961..692084 351..475 470 93.6 Plus
Y 3667352 Y 692116..692208 554..652 325 90.9 Plus
X 23542271 X 16365585..16365643 2084..2142 295 100 Plus
Y 3667352 Y 691850..691912 22..84 270 95.2 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:25:19
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 16375000..16376626 2140..3766 8120 99.9 Plus
X 23527363 X 16371456..16372728 504..1776 6365 100 Plus
X 23527363 X 16369650..16370152 1..503 2500 99.8 Plus
3L 28103327 3L 24527756..24528210 546..1005 1725 92.6 Plus
X 23527363 X 16373301..16373612 1775..2086 1560 100 Plus
3R 31820162 3R 16381960..16382768 1059..1870 1515 79.3 Plus
2R 25260384 2R 4732094..4732440 854..504 1430 94.3 Minus
3L 28103327 3L 24528276..24528535 1249..1511 1095 95 Plus
2R 25260384 2R 4731822..4732083 1120..853 880 89.1 Minus
Unimproved_211000022255879_1022_2177 1155 Unimproved_211000022255879_1022_2177 458..647 1046..1240 830 95.8 Plus
Unimproved_211000022255879_1022_2177 1155 Unimproved_211000022255879_1022_2177 250..458 692..901 815 93.3 Plus
Unimproved_211000022255879_1022_2177 1155 Unimproved_211000022255879_1022_2177 81..312 504..737 745 89.3 Plus
2R 25260384 2R 4732711..4732881 1354..1523 680 94.1 Plus
2R 25260384 2R 4732888..4733071 1542..1724 665 92.4 Plus
3L 28103327 3L 24527190..24527328 193..331 590 94.9 Plus
2R 25260384 2R 4731695..4731811 1243..1127 555 98.2 Minus
3L 28103327 3L 24527350..24527473 380..503 500 93.5 Plus
Y 3410481 Y 967108..967231 351..475 480 93.6 Plus
Y 3410481 Y 967263..967355 554..652 335 90.9 Plus
X 23527363 X 16373683..16373741 2084..2142 295 100 Plus
Y 3410481 Y 966997..967059 22..84 270 95.2 Plus
3L 28103327 3L 24528220..24528273 1180..1233 240 96.2 Plus
2R 25260384 2R 4733067..4733111 1732..1776 195 95.5 Plus
3L 28103327 3L 24527317..24527354 338..375 190 100 Plus
3L 28103327 3L 24527726..24527756 504..534 155 100 Plus
Blast to na_te.dros performed 2019-03-16 03:42:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\Tom 7060 Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). 581..813 3205..2972 163 57.6 Minus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 6693..6870 3172..2994 147 58.6 Minus
accord 7404 accord ACCORD 7404bp 1328..1569 2559..2791 132 56.3 Plus
ZAM 8435 ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). 5069..5159 3064..2970 132 63.2 Minus
Stalker4 7359 Stalker4 STALKER4 7359bp 1301..1482 3527..3725 126 57.3 Plus
297 6995 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). 2341..2457 2647..2760 119 62 Plus

RE58280.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 03:43:05 Download gff for RE58280.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 16251267..16251769 1..503 95 -> Plus
chrX 16253074..16254346 504..1776 97 -> Plus
chrX 16254921..16255229 1777..2085 100 -> Plus
chrX 16255303..16255358 2086..2141 100 -> Plus
chrX 16256618..16258240 2142..3767 95   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:26:14 Download gff for RE58280.complete
Subject Subject Range Query Range Percent Splice Strand
nonA-RA 1..2103 147..2249 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:29:42 Download gff for RE58280.complete
Subject Subject Range Query Range Percent Splice Strand
nonA-RA 1..2103 147..2249 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:48:06 Download gff for RE58280.complete
Subject Subject Range Query Range Percent Splice Strand
nonA-RA 1..2103 147..2249 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:19:57 Download gff for RE58280.complete
Subject Subject Range Query Range Percent Splice Strand
nonA-RA 1..2103 147..2249 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:12:09 Download gff for RE58280.complete
Subject Subject Range Query Range Percent Splice Strand
nonA-RA 1..2103 147..2249 100   Plus
Sim4 to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:05:49 has no hits.
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:59:10 Download gff for RE58280.complete
Subject Subject Range Query Range Percent Splice Strand
nonA-RA 20..3785 1..3766 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:29:42 Download gff for RE58280.complete
Subject Subject Range Query Range Percent Splice Strand
nonA-RA 20..3785 1..3766 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:48:06 Download gff for RE58280.complete
Subject Subject Range Query Range Percent Splice Strand
nonA-RD 1..3749 18..3767 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:19:57 Download gff for RE58280.complete
Subject Subject Range Query Range Percent Splice Strand
nonA-RA 20..3785 1..3766 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:12:09 Download gff for RE58280.complete
Subject Subject Range Query Range Percent Splice Strand
nonA-RD 1..3749 18..3767 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:43:05 Download gff for RE58280.complete
Subject Subject Range Query Range Percent Splice Strand
X 16361552..16362054 1..503 99 -> Plus
X 16363358..16364630 504..1776 100 -> Plus
X 16365205..16365513 1777..2085 100 -> Plus
X 16365587..16365642 2086..2141 100 -> Plus
X 16366904..16368528 2142..3767 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:43:05 Download gff for RE58280.complete
Subject Subject Range Query Range Percent Splice Strand
X 16361552..16362054 1..503 99 -> Plus
X 16363358..16364630 504..1776 100 -> Plus
X 16365205..16365513 1777..2085 100 -> Plus
X 16365587..16365642 2086..2141 100 -> Plus
X 16366904..16368528 2142..3767 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:43:05 Download gff for RE58280.complete
Subject Subject Range Query Range Percent Splice Strand
X 16361552..16362054 1..503 99 -> Plus
X 16363358..16364630 504..1776 100 -> Plus
X 16365205..16365513 1777..2085 100 -> Plus
X 16365587..16365642 2086..2141 100 -> Plus
X 16366904..16368528 2142..3767 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:48:06 Download gff for RE58280.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16255585..16256087 1..503 99 -> Plus
arm_X 16257391..16258663 504..1776 100 -> Plus
arm_X 16259238..16259546 1777..2085 100 -> Plus
arm_X 16259620..16259675 2086..2141 100 -> Plus
arm_X 16260937..16262561 2142..3767 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:53:36 Download gff for RE58280.complete
Subject Subject Range Query Range Percent Splice Strand
X 16369650..16370152 1..503 99 -> Plus
X 16371456..16372728 504..1776 100 -> Plus
X 16373303..16373611 1777..2085 100 -> Plus
X 16373685..16373740 2086..2141 100 -> Plus
X 16375002..16376626 2142..3767 99   Plus

RE58280.pep Sequence

Translation from 146 to 2248

> RE58280.pep
MESAGKQDNNATQQLPQRQQRGNQQANKNLGKHNAQKQNDSADGGPAEKK
QRFGGPNAQNQNQNQNQNGGVTGGGGAVGGPNQNKNFGNNKGGFVGNRNR
NNNRAGNQNRTFPGNNNPNQKPNNETSKADGPNALAKNNEPATAAAGQNQ
ANQNANKGQNQRQGQNQNQNQVHGQGNQGGPGNQGGAGNQGGQGNQGGAG
NQGNGQGFRGRNAGNNQGGGFSGGPQNQQRDNRNRSGPRPGGGAGGAMNS
TNMGGGGGGGGGGGPRGGEDFFITQRLRSISGPTFELEPVEVPTETKFSG
RNRLYVGNLTNDITDDELREMFKPYGEISEIFSNLDKNFTFLKVDYHPNA
EKAKRALDGSMRKGRQLRVRFAPNATILRVSNLTPFVSNELLYKSFEIFG
PIERASITVDDRGKHMGEGIVEFAKKSSASACLRMCNEKCFFLTASLRPC
LVDPMEVNDDTDGLPEKAFNKKMPDFNQERSIGPRFADPNSFEHEYGSRW
KQLHNLFKTKQDALKRELKMEEDKLEAQMEYARYEQETELLRQELRKREV
DNERKKLEWEMREKQAEEMRKREEETMRRHQTEMQSHMNRQEEDMLRRQQ
ETLFMKAQQLNSLLDQQEGFGGGGGGNNSTFDNFAGNSNSPFEVFRGNNN
NNSTMIGNNAAPNTQDSFAFEFGVNNMNQGGNQRGNNGGGNNVPWGRRRF
*

RE58280.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 07:17:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19266-PA 675 GF19266-PA 205..675 226..700 1985 86.4 Plus
Dana\GF21549-PA 115 GF21549-PA 14..98 436..520 269 60 Plus
Dana\GF21525-PA 163 GF21525-PA 14..96 436..518 250 59 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 07:17:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17959-PA 672 GG17959-PA 1..672 1..700 2480 87.4 Plus
Dere\GG21764-PA 675 GG21764-PA 1..675 1..700 1974 65.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 07:17:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12694-PA 721 GH12694-PA 225..628 268..662 1755 86.5 Plus
Dgri\GH13089-PA 545 GH13089-PA 163..527 268..645 987 55.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:08:22
Subject Length Description Subject Range Query Range Score Percent Strand
nonA-PD 700 CG4211-PD 1..700 1..700 3751 100 Plus
nonA-PA 700 CG4211-PA 1..700 1..700 3751 100 Plus
nonA-PB 742 CG4211-PB 1..677 1..677 3554 98.4 Plus
nonA-PC 698 CG4211-PC 1..665 1..665 3551 100 Plus
nonA-l-PB 630 CG10328-PB 1..630 1..700 1879 60 Plus
nonA-l-PA 630 CG10328-PA 1..630 1..700 1879 60 Plus
Hrb87F-PE 385 CG12749-PE 200..381 73..268 222 33.5 Plus
Hrb87F-PD 385 CG12749-PD 200..381 73..268 222 33.5 Plus
Hrb87F-PC 385 CG12749-PC 200..381 73..268 222 33.5 Plus
Hrb87F-PA 385 CG12749-PA 200..381 73..268 222 33.5 Plus
Hrb87F-PE 385 CG12749-PE 175..319 120..269 220 39.7 Plus
Hrb87F-PD 385 CG12749-PD 175..319 120..269 220 39.7 Plus
Hrb87F-PC 385 CG12749-PC 175..319 120..269 220 39.7 Plus
Hrb87F-PA 385 CG12749-PA 175..319 120..269 220 39.7 Plus
glo-PA 586 CG6946-PA 246..494 40..286 217 32.7 Plus
glo-PB 586 CG6946-PB 246..494 40..286 217 32.7 Plus
glo-PA 586 CG6946-PA 232..455 72..271 212 33 Plus
glo-PB 586 CG6946-PB 232..455 72..271 212 33 Plus
CG5787-PB 950 CG5787-PB 172..443 16..268 211 29 Plus
CG5787-PA 950 CG5787-PA 172..443 16..268 211 29 Plus
mam-PD 1594 CG8118-PD 176..431 1..268 207 30.1 Plus
mam-PB 1594 CG8118-PB 176..431 1..268 207 30.1 Plus
mam-PA 1594 CG8118-PA 176..431 1..268 207 30.1 Plus
Mur89F-PC 2158 CG4090-PC 604..925 3..260 207 21.8 Plus
Mur89F-PB 2159 CG4090-PB 604..925 3..260 207 21.8 Plus
CG5787-PB 950 CG5787-PB 242..458 53..276 206 28.9 Plus
CG5787-PA 950 CG5787-PA 242..458 53..276 206 28.9 Plus
Hrb87F-PE 385 CG12749-PE 199..380 67..268 205 32.3 Plus
Hrb87F-PD 385 CG12749-PD 199..380 67..268 205 32.3 Plus
Hrb87F-PC 385 CG12749-PC 199..380 67..268 205 32.3 Plus
Hrb87F-PA 385 CG12749-PA 199..380 67..268 205 32.3 Plus
CG3588-PE 891 CG3588-PE 368..689 16..312 204 27.9 Plus
CG3588-PF 631 CG3588-PF 340..620 16..272 203 28.1 Plus
CG3588-PH 659 CG3588-PH 368..648 16..272 203 28.1 Plus
CG3588-PG 659 CG3588-PG 368..648 16..272 203 28.1 Plus
CG3588-PI 662 CG3588-PI 371..651 16..272 203 28.1 Plus
Mur89F-PC 2158 CG4090-PC 545..731 63..251 201 22.4 Plus
Mur89F-PC 2158 CG4090-PC 548..730 42..234 201 26 Plus
Mur89F-PB 2159 CG4090-PB 545..731 63..251 201 22.4 Plus
Mur89F-PB 2159 CG4090-PB 548..730 42..234 201 26 Plus
tral-PE 642 CG10686-PE 41..351 1..270 201 28.1 Plus
tral-PG 643 CG10686-PG 41..351 1..270 201 28.1 Plus
tral-PB 652 CG10686-PB 41..351 1..270 201 28.1 Plus
tral-PA 652 CG10686-PA 41..351 1..270 201 28.1 Plus
tral-PF 653 CG10686-PF 41..351 1..270 201 28.1 Plus
CG4266-PD 1212 CG4266-PD 721..958 26..270 199 28.7 Plus
CG4266-PA 1215 CG4266-PA 724..961 26..270 199 28.7 Plus
CG4266-PB 1306 CG4266-PB 815..1052 26..270 199 28.7 Plus
caz-PB 399 CG3606-PB 10..331 4..270 198 26.6 Plus
CG15040-PA 1895 CG15040-PA 1536..1775 2..236 198 25.6 Plus
AGO2-PB 1214 CG7439-PB 50..380 6..301 194 26.4 Plus
AGO2-PC 1217 CG7439-PC 53..383 6..301 194 26.4 Plus
Mur89F-PC 2158 CG4090-PC 809..991 54..236 193 23.6 Plus
Mur89F-PB 2159 CG4090-PB 809..991 54..236 193 23.6 Plus
CG15140-PB 335 CG15140-PB 73..248 55..268 193 31 Plus
CG15040-PA 1895 CG15040-PA 1477..1711 6..234 193 24.2 Plus
mam-PC 433 CG8118-PC 33..203 82..268 193 33.3 Plus
caz-PB 399 CG3606-PB 204..382 58..266 191 32 Plus
caz-PD 355 CG3606-PD 160..338 58..266 191 32 Plus
caz-PC 384 CG3606-PC 189..367 58..266 191 32 Plus
Mur89F-PC 2158 CG4090-PC 795..1018 16..240 190 21.1 Plus
Mur89F-PB 2159 CG4090-PB 795..1018 16..240 190 21.1 Plus
tral-PD 646 CG10686-PD 41..355 1..270 190 26.9 Plus
tral-PI 647 CG10686-PI 41..355 1..270 190 26.9 Plus
tral-PC 656 CG10686-PC 41..355 1..270 190 26.9 Plus
tral-PH 657 CG10686-PH 41..355 1..270 190 26.9 Plus
Hrb98DE-PE 360 CG9983-PE 196..358 61..217 188 37.4 Plus
Hrb98DE-PF 361 CG9983-PF 197..359 61..217 188 37.4 Plus
Hrb98DE-PD 361 CG9983-PD 197..359 61..217 188 37.4 Plus
Hrb98DE-PA 364 CG9983-PA 200..362 61..217 188 37.4 Plus
Hrb98DE-PC 365 CG9983-PC 201..363 61..217 188 37.4 Plus
Hrb98DE-PB 365 CG9983-PB 201..363 61..217 188 37.4 Plus
CG5787-PB 950 CG5787-PB 244..489 22..252 187 28.3 Plus
CG5787-PA 950 CG5787-PA 244..489 22..252 187 28.3 Plus
Mur89F-PC 2158 CG4090-PC 538..727 18..222 187 22.9 Plus
Mur89F-PB 2159 CG4090-PB 538..727 18..222 187 22.9 Plus
Mur89F-PC 2158 CG4090-PC 388..698 3..260 186 20.1 Plus
Mur89F-PB 2159 CG4090-PB 388..698 3..260 186 20.1 Plus
caz-PC 384 CG3606-PC 10..316 4..270 186 26.4 Plus
CG15040-PA 1895 CG15040-PA 1654..1888 6..240 185 24.3 Plus
Mur89F-PC 2158 CG4090-PC 534..726 56..252 184 21.5 Plus
Mur89F-PB 2159 CG4090-PB 534..726 56..252 184 21.5 Plus
tna-PD 1109 CG7958-PD 34..277 14..265 184 29.9 Plus
Mur89F-PC 2158 CG4090-PC 645..937 3..260 182 23 Plus
Mur89F-PC 2158 CG4090-PC 800..989 65..252 182 21.8 Plus
Mur89F-PB 2159 CG4090-PB 645..937 3..260 182 23 Plus
Mur89F-PB 2159 CG4090-PB 800..989 65..252 182 21.8 Plus
CG15040-PA 1895 CG15040-PA 1595..1832 6..234 181 26.2 Plus
CG3588-PF 631 CG3588-PF 395..627 3..261 180 28.1 Plus
CG3588-PH 659 CG3588-PH 423..655 3..261 180 28.1 Plus
CG3588-PG 659 CG3588-PG 423..655 3..261 180 28.1 Plus
CG3588-PI 662 CG3588-PI 426..658 3..261 180 28.1 Plus
CG15140-PB 335 CG15140-PB 82..327 17..274 180 26 Plus
Hrb98DE-PE 360 CG9983-PE 169..330 140..282 176 33.7 Plus
Hrb98DE-PF 361 CG9983-PF 170..331 140..282 176 33.7 Plus
Hrb98DE-PD 361 CG9983-PD 170..331 140..282 176 33.7 Plus
Hrb98DE-PA 364 CG9983-PA 173..334 140..282 176 33.7 Plus
Hrb98DE-PC 365 CG9983-PC 174..335 140..282 176 33.7 Plus
Hrb98DE-PB 365 CG9983-PB 174..335 140..282 176 33.7 Plus
Hrb87F-PE 385 CG12749-PE 214..381 44..224 175 32.5 Plus
Hrb87F-PD 385 CG12749-PD 214..381 44..224 175 32.5 Plus
Hrb87F-PC 385 CG12749-PC 214..381 44..224 175 32.5 Plus
Hrb87F-PA 385 CG12749-PA 214..381 44..224 175 32.5 Plus
glo-PA 586 CG6946-PA 285..476 15..232 175 31.8 Plus
glo-PB 586 CG6946-PB 285..476 15..232 175 31.8 Plus
Mur89F-PC 2158 CG4090-PC 808..979 90..260 175 22.9 Plus
Mur89F-PB 2159 CG4090-PB 808..979 90..260 175 22.9 Plus
tna-PD 1109 CG7958-PD 210..454 31..264 175 28 Plus
Mur89F-PC 2158 CG4090-PC 433..714 2..258 174 21.3 Plus
Mur89F-PB 2159 CG4090-PB 433..714 2..258 174 21.3 Plus
tral-PG 643 CG10686-PG 250..586 2..264 174 26.5 Plus
AGO2-PB 1214 CG7439-PB 10..270 5..268 174 26.6 Plus
AGO2-PC 1217 CG7439-PC 13..273 5..268 174 26.6 Plus
tral-PI 647 CG10686-PI 254..590 2..264 174 26.5 Plus
caz-PD 355 CG3606-PD 24..287 31..270 173 26.8 Plus
CG15040-PA 1895 CG15040-PA 1464..1679 2..236 172 26.7 Plus
Hrb98DE-PE 360 CG9983-PE 169..355 40..264 172 30.3 Plus
Hrb98DE-PF 361 CG9983-PF 170..356 40..264 172 30.3 Plus
Hrb98DE-PD 361 CG9983-PD 170..356 40..264 172 30.3 Plus
Hrb98DE-PA 364 CG9983-PA 173..359 40..264 172 30.3 Plus
Hrb98DE-PC 365 CG9983-PC 174..360 40..264 172 30.3 Plus
Hrb98DE-PB 365 CG9983-PB 174..360 40..264 172 30.3 Plus
AGO2-PB 1214 CG7439-PB 2..293 5..268 170 26.5 Plus
tral-PE 642 CG10686-PE 250..585 2..264 169 26.6 Plus
tral-PD 646 CG10686-PD 254..589 2..264 169 26.6 Plus
mam-PD 1594 CG8118-PD 200..436 6..203 166 26.6 Plus
mam-PB 1594 CG8118-PB 200..436 6..203 166 26.6 Plus
mam-PA 1594 CG8118-PA 200..436 6..203 166 26.6 Plus
Mur89F-PC 2158 CG4090-PC 269..478 4..217 166 21.8 Plus
Mur89F-PB 2159 CG4090-PB 269..478 4..217 166 21.8 Plus
CG15040-PA 1895 CG15040-PA 1501..1724 6..236 164 25.1 Plus
Mur89F-PC 2158 CG4090-PC 257..458 32..236 162 18.8 Plus
Mur89F-PB 2159 CG4090-PB 257..458 32..236 162 18.8 Plus
Mur89F-PC 2158 CG4090-PC 809..1018 114..324 161 21.8 Plus
Mur89F-PB 2159 CG4090-PB 809..1018 114..324 161 21.8 Plus
CG15140-PB 335 CG15140-PB 49..197 119..267 159 31.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 07:17:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14459-PA 636 GI14459-PA 199..636 268..700 1805 85.9 Plus
Dmoj\GI14155-PA 562 GI14155-PA 158..562 268..698 1074 55.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 07:17:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23854-PA 715 GL23854-PA 280..715 269..700 1969 86.5 Plus
Dper\GL15833-PA 352 GL15833-PA 7..54 8..55 157 66.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 07:17:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA27079-PA 714 GA27079-PA 279..714 269..700 1920 86.5 Plus
Dpse\GA23435-PA 696 GA23435-PA 264..696 269..700 1908 87.6 Plus
Dpse\GA27079-PB 698 GA27079-PB 279..673 269..662 1817 86.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 07:17:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13430-PA 664 GM13430-PA 1..664 1..700 3187 91.2 Plus
Dsec\GM15178-PA 314 GM15178-PA 1..313 361..699 1188 71.8 Plus
Dsec\GM15177-PA 313 GM15177-PA 1..311 1..348 467 44.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 07:17:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\nonA-PA 699 GJ18793-PA 253..699 268..700 1904 85.8 Plus
Dvir\GJ17496-PA 550 GJ17496-PA 152..525 260..645 1155 59.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 07:17:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25061-PA 694 GK25061-PA 255..694 269..700 1920 85.5 Plus
Dwil\GK21698-PA 558 GK21698-PA 47..387 233..568 1054 60.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 07:17:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17267-PA 699 GE17267-PA 1..699 1..700 2580 87.9 Plus
Dyak\GE24585-PA 665 GE24585-PA 218..665 227..700 1850 78.2 Plus

RE58280.hyp Sequence

Translation from 146 to 2248

> RE58280.hyp
MESAGKQDNNATQQLPQRQQRGNQQANKNLGKHNAQKQNDSADGGPAEKK
QRFGGPNAQNQNQNQNQNGGVTGGGGAVGGPNQNKNFGNNKGGFVGNRNR
NNNRAGNQNRTFPGNNNPNQKPNNETSKADGPNALAKNNEPATAAAGQNQ
ANQNANKGQNQRQGQNQNQNQVHGQGNQGGPGNQGGAGNQGGQGNQGGAG
NQGNGQGFRGRNAGNNQGGGFSGGPQNQQRDNRNRSGPRPGGGAGGAMNS
TNMGGGGGGGGGGGPRGGEDFFITQRLRSISGPTFELEPVEVPTETKFSG
RNRLYVGNLTNDITDDELREMFKPYGEISEIFSNLDKNFTFLKVDYHPNA
EKAKRALDGSMRKGRQLRVRFAPNATILRVSNLTPFVSNELLYKSFEIFG
PIERASITVDDRGKHMGEGIVEFAKKSSASACLRMCNEKCFFLTASLRPC
LVDPMEVNDDTDGLPEKAFNKKMPDFNQERSIGPRFADPNSFEHEYGSRW
KQLHNLFKTKQDALKRELKMEEDKLEAQMEYARYEQETELLRQELRKREV
DNERKKLEWEMREKQAEEMRKREEETMRRHQTEMQSHMNRQEEDMLRRQQ
ETLFMKAQQLNSLLDQQEGFGGGGGGNNSTFDNFAGNSNSPFEVFRGNNN
NNSTMIGNNAAPNTQDSFAFEFGVNNMNQGGNQRGNNGGGNNVPWGRRRF
*

RE58280.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:44:52
Subject Length Description Subject Range Query Range Score Percent Strand
nonA-PD 700 CG4211-PD 1..700 1..700 3751 100 Plus
nonA-PA 700 CG4211-PA 1..700 1..700 3751 100 Plus
nonA-PB 742 CG4211-PB 1..677 1..677 3554 98.4 Plus
nonA-PC 698 CG4211-PC 1..665 1..665 3551 100 Plus
nonA-l-PB 630 CG10328-PB 1..630 1..700 1879 60 Plus