BDGP Sequence Production Resources |
Search the DGRC for RE58433
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 584 |
Well: | 33 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG11377-RA |
Protein status: | RE58433.pep: gold |
Preliminary Size: | 1373 |
Sequenced Size: | 1597 |
Gene | Date | Evidence |
---|---|---|
CG11377 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11377 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11377 | 2003-01-22 | Blastp of sequenced clone |
CG11377 | 2008-04-29 | Release 5.5 accounting |
CG11377 | 2008-08-15 | Release 5.9 accounting |
CG11377 | 2008-12-18 | 5.12 accounting |
1597 bp (1597 high quality bases) assembled on 2003-01-22
GenBank Submission: AY071548
> RE58433.complete ATTTATCGATAGTGTCGGCTTTAATTACACGTAAACTCAGATAGTTTGCC GGTTAAAAAGACAATAAATAAATAAAAATGAGAATCAAGTATTGTTGGCT CGCAACGCTAGTATTCATAGCCGCTGCTTCGGCGTCATATTCTCCCGAAA AGCCTGTTCCGCCGCCCTGCAGGGCATGTACCCAGCTTGTTAGCTCTTTC AGGGCAGGACTCGAAAGGACAAAACGCGGACACGCGGGCGGGGACACGGC ATGGGAGGAGGAAAAGTTGCGTTCGTACAAGAACAGCGAGGTACGGCTAG TGGAGATCCAGGAGAAGCTATGTTCGGAAGGAGAAGTGATAAACAAGGAT CACTGCCACAACCTGGCTAACGAGCACGAGGCGCTTCTCGAGGACTGGTT TATCCACAAACAAACAGAGAGTCCCGACCTGCAGTCATGGCTTTGCATCG ATCAGCTAACAGTCTGCTGTCCGCTGAACACCTACGGACCAGACTGCCTG ACCTGCACCGAGTGCAATGGAAATGGAAAATGCAAAGGAGACGGAACTAG AAAGGGTAACGGAAAGTGCAAATGTGATCCCGGCTATGCGGGTCCAAACT GCAACGAATGTGGACCGGAGCACTACGAATCATTCCGTGACGAAAAGAAA TTGCTGTGTACACAGTGCCATGCGGCCTGTGGGGAAGGAGGCTGCACGGG AGGTGGTCCCAAGAGCTGCCGCAAGTGTAAGAAGGGCTGGAGCATGGACT CGGAGGCAGGATGTGTCGACATTAATGAGTGCTTGGAGCAACAGCGTCCA AACCCTTGCCGACCACAGCAGTTCTGCGTGAACAATGAGGGCTCCTTTAG TTGCCTGGAGTGTGATCGATCTTGCGATGGATGCGATGGTGATGGCCCTG ACATGTGCAGGAAGTGTGCGGATGGCTATGAGTTGAAGGAAGGAAAGTGT CATGATATTTCTGCGGAGCAACGCAGCAACTACGTAAGCTTTACGCGAAT GCTCACCTACTTCGGAATGTGCGTGGCCACCTGTGTCATCTTCCAGAGCT CTACTCATATTGCCTGGGGTTGCATTGTTGGGGCGGCAGTGGCAGGGTAC ATTGCTGTTTCCGAGTACTGGATCAACTCGGAGGCAGGAGGCGGCCACCA ACCCGAAATAGATACAAAACAGTTGGAGGAACTAATAATGAAGTCTTTAT AAGTCAAAAGACATGTCAACATTGCTTTCCTTTTATGATATACACGAGCG TTTTGAAAAGCATAATCTTTTAACATTCCCCCAAGACATCTAACGATTTT TGTACTTCGTTTGCAGTCCGCAGTGATTCAAACTCCACGGTGCTCGGTGA AGAGTCCACGCACGAAGAATTGTAAAAGTAACCAAAAACGCACACCTTTT GTAGCCAATTTTACTTTAATAGGTAATATTATCAATTGATATGTAATTAT AAATTAGAATTTCAAAAAGCAGGGCATGACCATATTTTTTTACACGTACC ACACTTAGATATTTATTTGGTTTCAAAAATGTATAAAATCACAAATACAG CATATATTCGTATGAATAAATATTTTTAACTAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 103549..104176 | 954..1581 | 3140 | 100 | Plus |
chr2L | 23010047 | chr2L | 102416..102941 | 1..526 | 2630 | 100 | Plus |
chr2L | 23010047 | chr2L | 103039..103468 | 525..954 | 2150 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 102416..102940 | 1..525 | 100 | -> | Plus |
chr2L | 103040..103468 | 526..954 | 100 | -> | Plus |
chr2L | 103550..104176 | 955..1581 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11377-RA | 1..1125 | 78..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11377-RA | 1..1125 | 78..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11377-RA | 1..1125 | 78..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11377-RA | 1..1125 | 78..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11377-RA | 1..1125 | 78..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11377-RA | 1..1581 | 1..1581 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11377-RA | 1..1581 | 1..1581 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11377-RA | 3..1583 | 1..1581 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11377-RA | 1..1581 | 1..1581 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11377-RA | 3..1583 | 1..1581 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 102382..102906 | 1..525 | 100 | -> | Plus |
2L | 103006..103434 | 526..954 | 100 | -> | Plus |
2L | 103516..104142 | 955..1581 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 102382..102906 | 1..525 | 100 | -> | Plus |
2L | 103006..103434 | 526..954 | 100 | -> | Plus |
2L | 103516..104142 | 955..1581 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 102382..102906 | 1..525 | 100 | -> | Plus |
2L | 103006..103434 | 526..954 | 100 | -> | Plus |
2L | 103516..104142 | 955..1581 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 102382..102906 | 1..525 | 100 | -> | Plus |
arm_2L | 103006..103434 | 526..954 | 100 | -> | Plus |
arm_2L | 103516..104142 | 955..1581 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 102382..102906 | 1..525 | 100 | -> | Plus |
2L | 103006..103434 | 526..954 | 100 | -> | Plus |
2L | 103516..104142 | 955..1581 | 100 | Plus |
Translation from 77 to 1201
> RE58433.hyp MRIKYCWLATLVFIAAASASYSPEKPVPPPCRACTQLVSSFRAGLERTKR GHAGGDTAWEEEKLRSYKNSEVRLVEIQEKLCSEGEVINKDHCHNLANEH EALLEDWFIHKQTESPDLQSWLCIDQLTVCCPLNTYGPDCLTCTECNGNG KCKGDGTRKGNGKCKCDPGYAGPNCNECGPEHYESFRDEKKLLCTQCHAA CGEGGCTGGGPKSCRKCKKGWSMDSEAGCVDINECLEQQRPNPCRPQQFC VNNEGSFSCLECDRSCDGCDGDGPDMCRKCADGYELKEGKCHDISAEQRS NYVSFTRMLTYFGMCVATCVIFQSSTHIAWGCIVGAAVAGYIAVSEYWIN SEAGGGHQPEIDTKQLEELIMKSL*
Translation from 77 to 1201
> RE58433.pep MRIKYCWLATLVFIAAASASYSPEKPVPPPCRACTQLVSSFRAGLERTKR GHAGGDTAWEEEKLRSYKNSEVRLVEIQEKLCSEGEVINKDHCHNLANEH EALLEDWFIHKQTESPDLQSWLCIDQLTVCCPLNTYGPDCLTCTECNGNG KCKGDGTRKGNGKCKCDPGYAGPNCNECGPEHYESFRDEKKLLCTQCHAA CGEGGCTGGGPKSCRKCKKGWSMDSEAGCVDINECLEQQRPNPCRPQQFC VNNEGSFSCLECDRSCDGCDGDGPDMCRKCADGYELKEGKCHDISAEQRS NYVSFTRMLTYFGMCVATCVIFQSSTHIAWGCIVGAAVAGYIAVSEYWIN SEAGGGHQPEIDTKQLEELIMKSL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14862-PA | 371 | GF14862-PA | 7..371 | 8..374 | 1600 | 79.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24694-PA | 374 | GG24694-PA | 1..374 | 1..374 | 1847 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13622-PA | 306 | GH13622-PA | 1..306 | 64..374 | 1257 | 74.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11377-PA | 374 | CG11377-PA | 1..374 | 1..374 | 2119 | 100 | Plus |
CG11377-PB | 311 | CG11377-PB | 1..292 | 1..292 | 1689 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11694-PA | 374 | GI11694-PA | 1..374 | 1..374 | 1391 | 70.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16615-PA | 2094 | GL16615-PA | 1862..2094 | 142..374 | 1041 | 80.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10958-PA | 363 | GA10958-PA | 1..363 | 11..374 | 1595 | 80.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16714-PA | 374 | GM16714-PA | 1..374 | 1..374 | 1949 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23000-PA | 374 | GD23000-PA | 1..374 | 1..374 | 1938 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13058-PA | 373 | GJ13058-PA | 1..373 | 1..374 | 1408 | 70.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24605-PA | 381 | GK24605-PA | 8..381 | 2..374 | 1457 | 73.9 | Plus |
Dwil\GK13761-PA | 112 | GK13761-PA | 16..112 | 270..374 | 315 | 65.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16571-PA | 374 | GE16571-PA | 1..374 | 1..374 | 1827 | 94.4 | Plus |