BDGP Sequence Production Resources |
Search the DGRC for RE58929
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 589 |
Well: | 29 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG2765-RC |
Protein status: | RE58929.pep: gold |
Preliminary Size: | 1380 |
Sequenced Size: | 2322 |
Gene | Date | Evidence |
---|---|---|
CG2765 | 2002-10-09 | Blastp of sequenced clone |
CG2765 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2765 | 2008-04-29 | Release 5.5 accounting |
CG2765 | 2008-08-15 | Release 5.9 accounting |
CG2765 | 2008-12-18 | 5.12 accounting |
2322 bp (2322 high quality bases) assembled on 2002-10-09
GenBank Submission: BT001691
> RE58929.complete GTAATTTTTTCAAAATTCTTCTCGCTGACTGCTCGTGTCGAAACAGAAAC TGAAATTAAATTAAACTCGGTGCGTGTGCAGACTACTTAGAATTCCCATA TTTAATTGGTTCGGACTAGATCGACGGCCAAAGCCAAACCAAAGTCGGGG TCTAATCGAGTACATGTAAATTTTTGGCATAAAACAGCCGCGACTTATTG GAGGCAGCGCACTAGACACAGCAGTTCCGCCGGGGCAGCAGCTACTCCTA TTCCGAATCCAAACCAATTCAGGCCAGACCTGCACTGCAACCGAGCTGAA GCCAGCCCAGTCACCTGTGCCGATTTCGTAATCCCTGTCAGGAATACTCC GATTCCAAACGCGAGTGAAAGTGCGCGAGTGTTGGTGCGGCCAAAGAAAA TTTCTCGAACCACATATTTCCTGCAGCAGCAGTACATAGTCATCAGGAAT ACACAGTCATCATGAGTGGATACACGGACCTCACCAAGCTGGAGACAAGT CGAAACTGCCTGCGCCGCATCGCCCGTCACGATGAGCAGCAGTTCTCCAA AGACAGCATTGTCAATGTGATGGAAAAGTTTGTAAAGACTGTCAACATTA TGGACGACACCATACTGGTGCCATGCAGGCTCATGGATCGGCAGATCGGC GACAGCACTGACATCATCCCAGCAACCGGCAAGGACTCGACCGCCAACCA GCTGACACAGACCTCCAGTGCCCACGGCAAGCGGGGAGCGGCGCATTCAA AAAATGTCCAAGACTTTCTCAGCGCCTCCGAGCTGTTCAATCTGTACAAC ATGCTGAACTCCCTGAAAAAAGATCTGCTTTGGACCGCCAACCAGGAGGA CGACGACCAGCAGCACTCCGAACAGCAGCTCAACGCCAGTACCAGTTCCA CTTCGAGCTGCAATCCCAGCGAGAGCAAGACTGAATTCAACAGCGGCAGT CCAAGCACAACCGCATCCGGAAGTGTCAAGGGTCATGTGCGCCGTACCTC TACCGCATCCATGATGTCCACCAACTCGGTGAGCAACATGAGTGACTCTG ACTCGGACATATCGCAGGAAAACGACTCGGGGCTAGAGTCCGATGGCAAC AAGAGCGACAACGCCCAAAGCAGCGACGGCAGCGACATTGTAGACGTCGC CAAATCGAAGCCGGGCTCGGGGGACAAGGCCACGGAGCTGGCCAAGCGCT GCCGGAGGCATCTTAACGGTCTGTACCAGTGCCTGGAACAAATGACAGAG GCGGCCAACTACCTGACCGCCAGATACCAAAGTGATATTGGGCCCGTCTA GGACCGCCAACTCAAGGCCTTCTCGACCCTCTATTTCCTATGCCTCCTAC ACTATCACTTTCTTTCGAGCTGGTCGGGGTTAACTTCATACCATAGTCGC GGGCGGGTCTTTACACTCATTATTATCAAGTGTGAGGTATTTTTTTAACT TTAACTATAACTGTATCAAAATATCTATATCTATGTATGTATATGATTAT GTATATGTATCTTGAGGGGGTGCTAAGCAAGACATATGAGAATCGTATGT GTGCAATAGGATTGTATAAATGTATAACTGAGGATGATAAATAACTGGTA GATATAGTAGTGGATAAAGCAGCGCCTAAGCAACAAATTAACAAACGTTC TATTGTAAAAATTGTAACCTCTGCGTTGCATCTCTCTTATGGGTTTAAGG GTAGCCAAAGTCAAAAATCACAGAAGCGAGTCGCATCTATCCCAATCATT CCTTCTGTACCCGTTGGGGCTCCATTGCGCCCAAGTCAACAAATAACCAC CATGGCGCAGCGGTGGCACCGGCCCGAATATCCCTCTTCTTTACAATTGA TTTTCGTATTTATATATTGGATAGATAGCTATGGGAACTGCAAAACAACA CTAAAGCAAACGATGTTCAACAAGTACAAGAAATCTAATTTCTAACTAAA TTACGAATACGAACGTAAGTGAAGTGGGAGCTATGCTTGTGGAGACGGGA CCACTTCACTTTTAGCCTGTATGCAAATTTATATATTCCACAATTGTTAT TGTAATTGTTTAAGCCAACTATTTGTGCCGTTATGTTTCGTTTGATTTCC ACTTCGCAGCCGACCAGGGACACCCAGTGGTTACAGCAGGGGGGATCTCC TAAATCCCACCAAAGGTGACCTGGATACCCGACTGTGAGTCCCTGGTTCG GCAACGAGGACTGCAGAGCGAACTGTAAATTACTAACGTTAATAGCGCTT GTGCGAGAGCTAAAAGAGAATTGTTTATACATAATAAATAAATTTTACTT AGAAAGTAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2765-RA | 2513 | CG2765-RA | 153..2457 | 1..2305 | 11510 | 99.9 | Plus |
CG2765-RC | 1946 | CG2765-RC | 139..1942 | 502..2305 | 9005 | 99.9 | Plus |
CG2765-RE | 2058 | CG2765-RE | 250..2053 | 502..2305 | 9005 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 20845799..20847469 | 2305..642 | 8150 | 99.5 | Minus |
chr2R | 21145070 | chr2R | 20850539..20851040 | 502..1 | 2510 | 100 | Minus |
chr2R | 21145070 | chr2R | 20847569..20847711 | 644..502 | 715 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 24959843..24961506 | 2305..642 | 8305 | 99.9 | Minus |
2R | 25286936 | 2R | 24964572..24965073 | 502..1 | 2510 | 100 | Minus |
2R | 25286936 | 2R | 24961606..24961748 | 644..502 | 715 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 24961042..24962705 | 2305..642 | 8305 | 99.9 | Minus |
2R | 25260384 | 2R | 24965771..24966272 | 502..1 | 2510 | 100 | Minus |
2R | 25260384 | 2R | 24962805..24962947 | 644..502 | 715 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 20845837..20847466 | 645..2267 | 97 | <- | Minus |
chr2R | 20847569..20847710 | 503..644 | 100 | <- | Minus |
chr2R | 20850539..20851040 | 1..502 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2765-RA | 1..840 | 462..1301 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2765-RA | 1..840 | 462..1301 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2765-RE | 1..732 | 570..1301 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2765-RA | 1..840 | 462..1301 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2765-RE | 1..732 | 570..1301 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2765-RA | 11..2317 | 1..2307 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2765-RA | 11..2317 | 1..2307 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2765-RF | 4..2310 | 1..2307 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2765-RA | 11..2317 | 1..2307 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2765-RF | 4..2310 | 1..2307 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24959841..24961503 | 645..2307 | 99 | <- | Minus |
2R | 24961606..24961747 | 503..644 | 100 | <- | Minus |
2R | 24964572..24965073 | 1..502 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24959841..24961503 | 645..2307 | 99 | <- | Minus |
2R | 24961606..24961747 | 503..644 | 100 | <- | Minus |
2R | 24964572..24965073 | 1..502 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24959841..24961503 | 645..2307 | 99 | <- | Minus |
2R | 24961606..24961747 | 503..644 | 100 | <- | Minus |
2R | 24964572..24965073 | 1..502 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 20847364..20849026 | 645..2307 | 99 | <- | Minus |
arm_2R | 20849129..20849270 | 503..644 | 100 | <- | Minus |
arm_2R | 20852095..20852596 | 1..502 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24961058..24962720 | 645..2307 | 99 | <- | Minus |
2R | 24962823..24962964 | 503..644 | 100 | <- | Minus |
2R | 24965789..24966290 | 1..502 | 100 | Minus |
Translation from 461 to 1300
> RE58929.pep MSGYTDLTKLETSRNCLRRIARHDEQQFSKDSIVNVMEKFVKTVNIMDDT ILVPCRLMDRQIGDSTDIIPATGKDSTANQLTQTSSAHGKRGAAHSKNVQ DFLSASELFNLYNMLNSLKKDLLWTANQEDDDQQHSEQQLNASTSSTSSC NPSESKTEFNSGSPSTTASGSVKGHVRRTSTASMMSTNSVSNMSDSDSDI SQENDSGLESDGNKSDNAQSSDGSDIVDVAKSKPGSGDKATELAKRCRRH LNGLYQCLEQMTEAANYLTARYQSDIGPV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11520-PA | 274 | GF11520-PA | 1..274 | 1..279 | 1197 | 84.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19871-PA | 281 | GG19871-PA | 1..281 | 1..279 | 1357 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22045-PA | 279 | GH22045-PA | 1..279 | 1..279 | 1045 | 75.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2765-PF | 243 | CG2765-PF | 1..243 | 37..279 | 1238 | 100 | Plus |
CG2765-PD | 243 | CG2765-PD | 1..243 | 37..279 | 1238 | 100 | Plus |
CG2765-PE | 243 | CG2765-PE | 1..243 | 37..279 | 1238 | 100 | Plus |
CG2765-PC | 243 | CG2765-PC | 1..243 | 37..279 | 1238 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19131-PA | 287 | GI19131-PA | 1..287 | 1..279 | 1062 | 75.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10892-PA | 280 | GL10892-PA | 1..280 | 1..279 | 1202 | 84.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15456-PA | 280 | GA15456-PA | 1..280 | 1..279 | 1207 | 85.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11773-PA | 532 | GM11773-PA | 261..532 | 11..279 | 1123 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22264-PA | 281 | GJ22264-PA | 1..281 | 1..279 | 1084 | 76.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20750-PA | 274 | GK20750-PA | 1..274 | 1..279 | 1062 | 76.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11396-PA | 280 | GE11396-PA | 1..280 | 1..279 | 1402 | 95.7 | Plus |
Translation from 461 to 1300
> RE58929.hyp MSGYTDLTKLETSRNCLRRIARHDEQQFSKDSIVNVMEKFVKTVNIMDDT ILVPCRLMDRQIGDSTDIIPATGKDSTANQLTQTSSAHGKRGAAHSKNVQ DFLSASELFNLYNMLNSLKKDLLWTANQEDDDQQHSEQQLNASTSSTSSC NPSESKTEFNSGSPSTTASGSVKGHVRRTSTASMMSTNSVSNMSDSDSDI SQENDSGLESDGNKSDNAQSSDGSDIVDVAKSKPGSGDKATELAKRCRRH LNGLYQCLEQMTEAANYLTARYQSDIGPV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2765-PF | 243 | CG2765-PF | 1..243 | 37..279 | 1238 | 100 | Plus |
CG2765-PD | 243 | CG2765-PD | 1..243 | 37..279 | 1238 | 100 | Plus |
CG2765-PE | 243 | CG2765-PE | 1..243 | 37..279 | 1238 | 100 | Plus |
CG2765-PC | 243 | CG2765-PC | 1..243 | 37..279 | 1238 | 100 | Plus |