BDGP Sequence Production Resources |
Search the DGRC for RE58962
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 589 |
Well: | 62 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14565-RA |
Protein status: | RE58962.pep: gold |
Preliminary Size: | 810 |
Sequenced Size: | 1036 |
Gene | Date | Evidence |
---|---|---|
CG14565 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14565 | 2002-04-26 | Blastp of sequenced clone |
CG14565 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14565 | 2008-04-29 | Release 5.5 accounting |
CG14565 | 2008-08-15 | Release 5.9 accounting |
CG14565 | 2008-12-18 | 5.12 accounting |
1036 bp (1036 high quality bases) assembled on 2002-04-26
GenBank Submission: AY113505
> RE58962.complete ATCAAATCGTCAGCAAATTGACCAGCGAACATGTGGAAAGGACTCGGTTG CGCTCTACTCTGCCTGGCTGTGGTCCAGGCGGCTGTTATCCGCCCCGGAG GGGATCCGGAGGTTCCGGAAACCACAACTAGTGCGGTTATCCGGGATCAA GAGGGGAATGTCACCACCGCGGAGGCCACAACTTTGGCGGGTCCTGCTTT GAGTCGCGACGAGGAGGCCAGCATACTGATTGATCCTGCCCCGGGCACTT TACATGAGGATAGCGCCGTAGCGCCAGAGAAGTCCGGGAAGCTCCTGCTG CTGAGTACAACACCCAAGCGACTCCATGAAATTGAGCGCCATCTCGAGGA GCAGGACGACGAGGGGGAGGACAACAAGGCCGAAGTGGAGGTAACCACAA CTGAGCAGCCAAAGGAAGCCGAGGAGCTAAAGGTGGACGAGGAGGAGGGC GTCACCCCTGAAAGTTCAACCACAGAGAGCAGCACAACTGCGGCCACTAC CAAACTGTTTGCCATCGACGCCAGTTCGGCCGGAGTGGAGTCCCCACCAC CGAACGTGGCCATCTCCCTCTCCCAGGACAATGAGAATGCAACGCTATCG ATTGCCGAGCAGCAGCAGGTGCCCGGCGACAATAGTGCCGCCGTGGAGCT GGCCATCGTAGAGCCGGAGGCCGAGTACGTGCTAGTAGATGGCGGCCACG ATGACCTGGACGTCCAGCTGGCCAGCTTCACTCACATCGGCAGCGATGCC CACTTGCAGCCTGTTGTGCACTCCGTCGAAATCGTGCCCACCAGCTTCGA TGATCCTTTGATTGTCAATTACGTGCACAATTTGCGCTGACTTTCCCAAG GAGGCGTGCCAGGACGAATCAATTAACCCGGCGCGATGGCCACGGGGACT CTGTTAAAGTTTCTTCTTAACTCCTTTTGTTACCTCTTCAATATGCTTAT CGAATGGCTTGATGACTGGCATTTAACGAAATAAATAGGCCCATATATTA AGGGCATCAGATTCTTTAAGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14565-RA | 1021 | CG14565-RA | 1..1018 | 1..1018 | 5090 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 21732182..21733199 | 1018..1 | 5090 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 21743247..21744264 | 1018..1 | 5090 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 21736347..21737364 | 1018..1 | 5090 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 21732179..21733199 | 1..1020 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14565-RA | 1..810 | 31..840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14565-RA | 1..810 | 31..840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14565-RA | 1..810 | 31..840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14565-RA | 1..810 | 31..840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14565-RA | 1..810 | 31..840 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14565-RA | 1..1018 | 1..1020 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14565-RA | 1..1017 | 1..1017 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14565-RA | 6..1022 | 1..1017 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14565-RA | 1..1018 | 1..1020 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14565-RA | 6..1022 | 1..1017 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21743244..21744264 | 1..1020 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21743244..21744264 | 1..1020 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21743244..21744264 | 1..1020 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 21736344..21737364 | 1..1020 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21736344..21737364 | 1..1020 | 99 | Minus |
Translation from 30 to 839
> RE58962.pep MWKGLGCALLCLAVVQAAVIRPGGDPEVPETTTSAVIRDQEGNVTTAEAT TLAGPALSRDEEASILIDPAPGTLHEDSAVAPEKSGKLLLLSTTPKRLHE IERHLEEQDDEGEDNKAEVEVTTTEQPKEAEELKVDEEEGVTPESSTTES STTAATTKLFAIDASSAGVESPPPNVAISLSQDNENATLSIAEQQQVPGD NSAAVELAIVEPEAEYVLVDGGHDDLDVQLASFTHIGSDAHLQPVVHSVE IVPTSFDDPLIVNYVHNLR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24636-PA | 267 | GF24636-PA | 1..267 | 1..269 | 742 | 65.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13201-PA | 269 | GG13201-PA | 1..269 | 1..269 | 1153 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15091-PA | 292 | GH15091-PA | 1..292 | 1..269 | 473 | 46.5 | Plus |
Dgri\GH25243-PA | 108 | GH25243-PA | 1..108 | 170..269 | 327 | 62.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14565-PA | 269 | CG14565-PA | 1..269 | 1..269 | 1356 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13740-PA | 298 | GI13740-PA | 27..298 | 15..269 | 462 | 46.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25271-PA | 277 | GL25271-PA | 1..277 | 1..269 | 751 | 63.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13084-PA | 275 | GA13084-PA | 1..275 | 1..269 | 766 | 63.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22111-PA | 269 | GM22111-PA | 1..269 | 1..269 | 1222 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12088-PA | 269 | GD12088-PA | 1..269 | 1..269 | 1243 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14085-PA | 300 | GJ14085-PA | 1..300 | 1..269 | 533 | 47.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17121-PA | 290 | GK17121-PA | 41..290 | 45..269 | 487 | 50.2 | Plus |
Translation from 30 to 839
> RE58962.hyp MWKGLGCALLCLAVVQAAVIRPGGDPEVPETTTSAVIRDQEGNVTTAEAT TLAGPALSRDEEASILIDPAPGTLHEDSAVAPEKSGKLLLLSTTPKRLHE IERHLEEQDDEGEDNKAEVEVTTTEQPKEAEELKVDEEEGVTPESSTTES STTAATTKLFAIDASSAGVESPPPNVAISLSQDNENATLSIAEQQQVPGD NSAAVELAIVEPEAEYVLVDGGHDDLDVQLASFTHIGSDAHLQPVVHSVE IVPTSFDDPLIVNYVHNLR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14565-PA | 269 | CG14565-PA | 1..269 | 1..269 | 1356 | 100 | Plus |