Clone RE59328 Report

Search the DGRC for RE59328

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:593
Well:28
Vector:pFlc-1
Associated Gene/TranscriptCG32264-RI
Protein status:RE59328.pep: gold
Preliminary Size:801
Sequenced Size:3810

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14978 2002-01-01 Sim4 clustering to Release 2
CG32264 2002-04-26 Blastp of sequenced clone
CG32264 2003-01-01 Sim4 clustering to Release 3
CG32264 2008-04-29 Release 5.5 accounting
CG32264 2008-08-15 Release 5.9 accounting
CG32264 2008-12-18 5.12 accounting

Clone Sequence Records

RE59328.complete Sequence

3810 bp (3810 high quality bases) assembled on 2002-04-26

GenBank Submission: BT003479

> RE59328.complete
AGTCGTCGTACTTTGGCCCAGCGTCTCTGGTCGGAAAAGCGGAAAAGCGG
GACTTTTCACCCGGGAGAGAGTGTCGCGAATCCTCGCTCTCGCCCAGATA
CCGTTAGAACCTGTTCGAACTAGGTCCTTTAGTGGCATACATATGCGTGG
CATCCTTCGCGTCCGTGTGTGCTTGTGCTATGTGTTTTCATAAATATAAA
TAAATAAGTCCTGGCTGGTCCAGAACTTACTACTACTACTACCCCACACA
CACACAACAGCTGATTATTTCAAATCGGCGCTGGAGATTTTTATAAACAC
TTTCAAGTGGGTTTTTGGGTTTGAGAGGCTGCCGAGCGACCTTGACATCG
CAGTCAATGGTCTAGTTACCTCTTGCATTATCTTTGACTCGCTGAAATCA
TTGCGAAATCAGCTGGATTATTAGTGATTTATACTAAAGATTTATGAAGT
TTTCTAAATTTTATAAATCGTATTTTAACAGTGTGAATGGGTCGCTGAAA
TGGTAAACAATTCAGTGTGTATTTTCTAAAGAAAATTTATTTCTAACGAT
TTTAGTGTAATATTTGTAGTAAATACTGGATAGCAAATCCAGCGACCGAA
ACGCAATGGTCTAGTGCCACTTTTGAACTGTATAAGTTAATATTAGATCA
GCCTCAAGCTGGATTACAGCAGCGATAGCAACGGACCCTGGGAGAAGCAG
CAGCAGAACCCAAATCCGCAGAACTCCAACGCGGAAAAGGACAACAATGC
CAGGACCAATGAGCAGCTGCAGCAGGACTTGCTGCAACAGTTGCAGCAGC
AATTCCAGATGGCAGCGGTGCAGCAGCAGCAGCACCACCAGCGGCAGTTG
CTGCACCACCAGCACTCCCATCCGCCCTTCCAAGCCACCCAGCAGCACCA
GCCCGCGCAGCAGCAGCAGCAGCAGCAGCATCAAACGGTGCAGCAGCAGC
AGCAACAGCAGCAGCAGCGCTTGCACCACTCGCACCACCCACCGCTGCAG
CACCACCTGTCGCTGGGTGGCTACCAGCAACTGCAGCTGCAGATGCAGGC
CAACAGGAATCAGTACTCCACGCCGCAGCATCACTATCGCAATGCAACCA
ATGCTGCAGCGGCCGCAGCTGCAACATCGGCGAATGCTGCCACCATTAGA
CGCCGCACCTTGAGTCACGTATCGCGCTCTTACTCCCTGGGCACAGCGGC
GGCCAACGCAGCAGCAGCCGCAGCAGCAGCAGCAGCAACAGCAGCGGCCA
CAACTGCAGCAGCCACAACTGCAACATCATCGGCCAGTAGCAACAATCAA
CTGAGTATCCACAAAACTGGGATCATGGTCGCCGCCTCACGATGTCGAAG
TCCCATAATGCTGTGCCACAGTCACAGCGACGGCGAGTTTCCACTGTACC
GAGCTAAGAAACAGAATGGAGCTGCCATACGCACAAATAGCCTGGGTTCG
GGCACTAGGACGCCACCTTTGGAAAGGAAGAGCAAACTCAGTGCCCTGGG
CAGATTCTTTAAGCCCTGGAAATGGCGACGGAAAAAGAAGAGCGAGAAGT
TCGAGGCGGCCTCCAAATCCCTGGAGCGTAAGATTTCTGTGCGTGCCAAT
CGTGATGAGCTAGTGCAAAAGGGGATTCTAATGCCTGAGAGTCCCCTGGG
CAATATTCCAGAACCAGGCGAGGAGTCGTATTATAACAACAGCAATAGTG
GAGCCACCGCGAATGGATCCCTGCTCAACTCAGCCGTCCACAATAATTCC
ATGAGCCAGGCCAATAATTCCATAAATGCCACCACCGGCAATCCGCTCAT
CTCCGCCGCCCAGCAGCAGCTGAACCAGGGACTTCCCAACTCGATCTCCG
TGCAGCAGTTCAACGGTCAGAACCAGAATCCACAGAATTCCATGGCCAAT
GGCCTAGTGGGTGGCGGCGGCGGCGGTGGAGACGGTTCCTCGGACACGTC
TTCCCTCAGCGGCGGCGTTCCGCACTCGCAGTCGGCGCCCCAGCAACTGG
GGGTGGGGCAACCACCACCACCCCTAACACCACTGGCCCAGCACCACCAG
GCGCTGGCACAGCAGCTGCAGCAGCGATTCGCCATCAGCAACAATAACGA
ACCAAGAAAAGACAAGACTGATGCACAACAACAACAACACGGAGGCAATG
GCACAATATCCACGCCCAACATCGAGCAGCCCACCTGCCAGGGCTCGATG
CTGCCGCCCCCCGGAGGCGGTGGCCATCACCAGGTGGACGGGAGTGGCAA
GATGGAGCGGCCCAACACGCTCGCCGGCGCCAATAAGCTGACCCGTCGCG
GGGTCAACATCTGCTATCACAACGAGCACATGTATGGCGAAGATGGAAAA
ATGGTGGGTGGTCCGCCGGGCAGCACTCCGCCCCCGTATCCGGGTGGCAA
ACTACCGCCGGGCGTAATGCTCAGCGAGCTGCCGGAGCCGCCGATTCCGC
TGTCGGAGATCGGACCGATCCCACCGCCCCCGATGTTCTCCACTCCGAGT
CCCACGCTCATCGCAGGACGACCGCACGGGCCAGGGGCCGTCAACGATCA
GGATTATCAGCAGGACTACGACTACGATGATAACGATCCCGATCAGGATG
AGCTTGACTCGGACGATGAGTACGCCCCGTATGGTGGCAACCATGTGCGC
ATGATGGACACGCAACGCGTCGAGGAAATTCCAGCCAAAGAGCCCAAACC
AAATGCAGTTCCTCTCAAGTCGGCGCTGAAGAAGAAGGGCGGTATGCAGC
CCGCTTCCGCCTCCACGCCGGTCACGCCCACCCAGGAACATGGAGCGGGA
AGTGCGGCAACGGCAGCGGCCATGGCAAACAGCAATGGCGGTATTGGCTC
GATGGCGGCAGCTGCCGCAGCTGCGGCCCAACAATCCGCCAACCAACGAC
CGCTGGTCGTTCGCCAGGATGCGGCGGGCAATAACTATTCGCTCAAGCCA
ATACTACGACCACGGATTAGACTATGCAGGCAGCAAATGTTCAACATCCA
ATTGCCGTGCACCGTGGAGAACAAGGAGAACGCCCGGCCATTTGTGATAC
GCGAAAGCAGCAGCGATAGTGACGACAGCGATGGCCATATCGTCTACAGG
GACGAGGACAACGACAACACCCGGCTGGCCAAACTGGCCCGCAAGGAGTC
GCTGTCCCTGAAGCTGCAGCTCCGACCGGACAAGCAGGACCTGATCAACC
GCAACATCCTGCACCAGGTCAACGACAACGAGCTCAAGGAGTCCAAGGAG
GCGATCGGAGCACGCCTCATCCGGCGGCTGTCCATGCGACCCACGGCCGA
GGAGCTGGTCGAGCGCAACATCTTGAAAACTCAATCACCCGCCGAGGAGA
AGAAGCAGAAGGAGGAGAAGAAGTCGTATCTGTTGCGCAAACTCAGCTTT
CGGCCGACCGTCGAGGAGCTGAAGGAGAAGAAGATCATCCGATTCAACGA
CTACATCGAGGTCACGCAGGCCCACGACTACGATCGGCGGGCGGACAAGC
CGTGGACAAGACTGACGCCAAAGGACAAGGCCGCCATTCGCAAGGAGCTG
AACGAGTTCAAGTCCTCCGAAATGGCCGTCCACGAGGGCAGTCGGCATTT
GACGAGATTCCATAGGCCATGACGATTGCAATGGCAGCAACTTTCCAGCA
AATTACAACAGCAACCGAAGCAGCAATTGTATTTCATGCAGCATAAAATT
GTCAACAAATGTTTAAAAGCAAAAAATTAAGCCAGCAAACTAAAAACGAA
GGAAACTTTCAACGCAAAAAAAAAGCAAGCATAGAAATGCAAAAAATAAA
AAAAAAAAAA

RE59328.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:10:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG32264-RA 3810 CG32264-RA 1..3810 1..3810 19020 99.9 Plus
CG32264.e 4074 CG32264.e 1..3810 1..3810 19020 99.9 Plus
CG32264.g 4337 CG32264.g 1410..3817 1403..3810 12010 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 14:46:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 3799310..3800713 1403..1 6820 99.2 Minus
chr3L 24539361 chr3L 3766492..3766929 2099..1665 2065 98.6 Minus
chr3L 24539361 chr3L 3721527..3721895 2947..2579 1845 100 Minus
chr3L 24539361 chr3L 3718013..3718366 3329..2976 1755 99.7 Minus
chr3L 24539361 chr3L 3717561..3717837 3606..3330 1340 98.9 Minus
chr3L 24539361 chr3L 3722228..3722477 2583..2334 1205 98.8 Minus
chr3L 24539361 chr3L 3723012..3723246 2333..2099 1160 99.6 Minus
chr3L 24539361 chr3L 3716585..3716774 3795..3605 905 99.5 Minus
chr3L 24539361 chr3L 3768566..3768732 1568..1402 820 99.4 Minus
chr3L 24539361 chr3L 3768400..3768499 1668..1569 500 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:06:32 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 14:46:48
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3799886..3801288 1403..1 7015 100 Minus
3L 28110227 3L 3767137..3767571 2099..1665 2175 100 Minus
3L 28110227 3L 3722155..3722523 2947..2579 1845 100 Minus
3L 28110227 3L 3718638..3718991 3329..2976 1770 100 Minus
3L 28110227 3L 3718196..3718472 3606..3330 1385 100 Minus
3L 28110227 3L 3722856..3723105 2583..2334 1220 99.2 Minus
3L 28110227 3L 3723639..3723873 2333..2099 1175 100 Minus
3L 28110227 3L 3717204..3717409 3810..3605 1015 99.5 Minus
3L 28110227 3L 3769242..3769408 1568..1402 835 100 Minus
3L 28110227 3L 3769077..3769176 1668..1569 500 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:41:36
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 3799886..3801288 1403..1 7015 100 Minus
3L 28103327 3L 3767137..3767571 2099..1665 2175 100 Minus
3L 28103327 3L 3722155..3722523 2947..2579 1845 100 Minus
3L 28103327 3L 3718638..3718991 3329..2976 1770 100 Minus
3L 28103327 3L 3718196..3718472 3606..3330 1385 100 Minus
3L 28103327 3L 3722856..3723105 2583..2334 1220 99.2 Minus
3L 28103327 3L 3723639..3723873 2333..2099 1175 100 Minus
3L 28103327 3L 3717204..3717409 3810..3605 1015 99.5 Minus
3L 28103327 3L 3769242..3769408 1568..1402 835 100 Minus
3L 28103327 3L 3769077..3769176 1668..1569 500 100 Minus
3L 28103327 3L 3721537..3721570 2976..2943 155 97 Minus
Blast to na_te.dros performed 2019-03-16 14:46:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2324..2974 666..1298 476 56.6 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3239..3322 1193..1279 184 71.3 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 3799..3956 574..407 150 60 Minus
Damb\P-element_T 3329 Damb\P-element_T P_T 3329bp Derived from AF012414. 877..942 3092..3027 123 65.2 Minus

RE59328.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 14:47:29 Download gff for RE59328.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 3722232..3722477 2334..2579 99 <- Minus
chr3L 3723012..3723245 2100..2333 99 <- Minus
chr3L 3716615..3716772 3607..3764 100 <- Minus
chr3L 3717561..3717837 3330..3606 98 <- Minus
chr3L 3718013..3718365 2977..3329 99 <- Minus
chr3L 3720909..3720938 2947..2976 100 <- Minus
chr3L 3721528..3721894 2580..2946 100 <- Minus
chr3L 3766492..3766926 1668..2099 98 <- Minus
chr3L 3768401..3768499 1569..1667 100 <- Minus
chr3L 3768566..3768730 1404..1568 99 <- Minus
chr3L 3799310..3799449 1264..1403 100 == Minus
chr3L 3799506..3799744 969..1207 100 == Minus
chr3L 3799807..3799848 865..906 100 == Minus
chr3L 3799952..3800713 1..761 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:19:27 Download gff for RE59328.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RA 1..2814 809..3622 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:55:38 Download gff for RE59328.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RA 1..2814 809..3622 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 15:56:49 Download gff for RE59328.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RI 1..2814 809..3622 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:48:59 Download gff for RE59328.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RA 1..2814 809..3622 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:32:40 Download gff for RE59328.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RI 1..2814 809..3622 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:19:27 Download gff for RE59328.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RA 1..3796 1..3797 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:55:37 Download gff for RE59328.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RA 1..3796 1..3797 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:56:49 Download gff for RE59328.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RI 1..3796 1..3797 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:48:59 Download gff for RE59328.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RA 1..3796 1..3797 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:32:40 Download gff for RE59328.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RI 1..3796 1..3797 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:47:29 Download gff for RE59328.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3722860..3723105 2334..2579 99 <- Minus
3L 3717217..3717407 3607..3797 99 <- Minus
3L 3718196..3718472 3330..3606 100 <- Minus
3L 3718638..3718990 2977..3329 100 <- Minus
3L 3721537..3721566 2947..2976 100 <- Minus
3L 3722156..3722522 2580..2946 100 <- Minus
3L 3723639..3723872 2100..2333 100 <- Minus
3L 3767137..3767568 1668..2099 100 <- Minus
3L 3769078..3769176 1569..1667 100 <- Minus
3L 3769242..3769406 1404..1568 100 <- Minus
3L 3799886..3801288 1..1403 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:47:29 Download gff for RE59328.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3722860..3723105 2334..2579 99 <- Minus
3L 3717217..3717407 3607..3797 99 <- Minus
3L 3718196..3718472 3330..3606 100 <- Minus
3L 3718638..3718990 2977..3329 100 <- Minus
3L 3721537..3721566 2947..2976 100 <- Minus
3L 3722156..3722522 2580..2946 100 <- Minus
3L 3723639..3723872 2100..2333 100 <- Minus
3L 3767137..3767568 1668..2099 100 <- Minus
3L 3769078..3769176 1569..1667 100 <- Minus
3L 3769242..3769406 1404..1568 100 <- Minus
3L 3799886..3801288 1..1403 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:47:29 Download gff for RE59328.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3722860..3723105 2334..2579 99 <- Minus
3L 3717217..3717407 3607..3797 99 <- Minus
3L 3718196..3718472 3330..3606 100 <- Minus
3L 3718638..3718990 2977..3329 100 <- Minus
3L 3721537..3721566 2947..2976 100 <- Minus
3L 3722156..3722522 2580..2946 100 <- Minus
3L 3723639..3723872 2100..2333 100 <- Minus
3L 3767137..3767568 1668..2099 100 <- Minus
3L 3769078..3769176 1569..1667 100 <- Minus
3L 3769242..3769406 1404..1568 100 <- Minus
3L 3799886..3801288 1..1403 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:56:49 Download gff for RE59328.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3722156..3722522 2580..2946 100 <- Minus
arm_3L 3722860..3723105 2334..2579 99 <- Minus
arm_3L 3723639..3723872 2100..2333 100 <- Minus
arm_3L 3717217..3717407 3607..3797 99 <- Minus
arm_3L 3718196..3718472 3330..3606 100 <- Minus
arm_3L 3718638..3718990 2977..3329 100 <- Minus
arm_3L 3721537..3721566 2947..2976 100 <- Minus
arm_3L 3767137..3767568 1668..2099 100 <- Minus
arm_3L 3769078..3769176 1569..1667 100 <- Minus
arm_3L 3769242..3769406 1404..1568 100 <- Minus
arm_3L 3799886..3801288 1..1403 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:20:45 Download gff for RE59328.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3718196..3718472 3330..3606 100 <- Minus
3L 3799886..3801288 1..1403 100   Minus
3L 3718638..3718990 2977..3329 100 <- Minus
3L 3721537..3721566 2947..2976 100 <- Minus
3L 3722156..3722522 2580..2946 100 <- Minus
3L 3722860..3723105 2334..2579 99 <- Minus
3L 3723639..3723872 2100..2333 100 <- Minus
3L 3767137..3767568 1668..2099 100 <- Minus
3L 3769078..3769176 1569..1667 100 <- Minus
3L 3769242..3769406 1404..1568 100 <- Minus
3L 3717217..3717407 3607..3797 99 <- Minus

RE59328.pep Sequence

Translation from 808 to 3621

> RE59328.pep
MAAVQQQQHHQRQLLHHQHSHPPFQATQQHQPAQQQQQQQHQTVQQQQQQ
QQQRLHHSHHPPLQHHLSLGGYQQLQLQMQANRNQYSTPQHHYRNATNAA
AAAAATSANAATIRRRTLSHVSRSYSLGTAAANAAAAAAAAAATAAATTA
AATTATSSASSNNQLSIHKTGIMVAASRCRSPIMLCHSHSDGEFPLYRAK
KQNGAAIRTNSLGSGTRTPPLERKSKLSALGRFFKPWKWRRKKKSEKFEA
ASKSLERKISVRANRDELVQKGILMPESPLGNIPEPGEESYYNNSNSGAT
ANGSLLNSAVHNNSMSQANNSINATTGNPLISAAQQQLNQGLPNSISVQQ
FNGQNQNPQNSMANGLVGGGGGGGDGSSDTSSLSGGVPHSQSAPQQLGVG
QPPPPLTPLAQHHQALAQQLQQRFAISNNNEPRKDKTDAQQQQHGGNGTI
STPNIEQPTCQGSMLPPPGGGGHHQVDGSGKMERPNTLAGANKLTRRGVN
ICYHNEHMYGEDGKMVGGPPGSTPPPYPGGKLPPGVMLSELPEPPIPLSE
IGPIPPPPMFSTPSPTLIAGRPHGPGAVNDQDYQQDYDYDDNDPDQDELD
SDDEYAPYGGNHVRMMDTQRVEEIPAKEPKPNAVPLKSALKKKGGMQPAS
ASTPVTPTQEHGAGSAATAAAMANSNGGIGSMAAAAAAAAQQSANQRPLV
VRQDAAGNNYSLKPILRPRIRLCRQQMFNIQLPCTVENKENARPFVIRES
SSDSDDSDGHIVYRDEDNDNTRLAKLARKESLSLKLQLRPDKQDLINRNI
LHQVNDNELKESKEAIGARLIRRLSMRPTAEELVERNILKTQSPAEEKKQ
KEEKKSYLLRKLSFRPTVEELKEKKIIRFNDYIEVTQAHDYDRRADKPWT
RLTPKDKAAIRKELNEFKSSEMAVHEGSRHLTRFHRP*

RE59328.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:08:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10261-PA 1029 GF10261-PA 270..1029 199..937 2888 91 Plus
Dana\GF10260-PA 233 GF10260-PA 68..224 61..200 363 67.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:08:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14249-PA 801 GG14249-PA 288..801 423..937 2744 98.1 Plus
Dere\GG14247-PA 465 GG14247-PA 59..440 54..430 1389 91.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:08:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15049-PA 1030 GH15049-PA 255..1030 199..937 2705 83.5 Plus
Dgri\GH17213-PA 106 GH17213-PA 1..88 201..288 421 97.7 Plus
Dgri\GH15048-PA 642 GH15048-PA 443..629 20..200 321 50.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:26:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG32264-PI 937 CG32264-PI 1..937 1..937 4894 100 Plus
CG32264-PM 927 CG32264-PM 1..927 1..937 4814 98.8 Plus
CG32264-PD 1008 CG32264-PD 133..1008 47..937 3892 84.4 Plus
CG32264-PE 998 CG32264-PE 133..998 47..937 3812 83.2 Plus
CG32264-PL 759 CG32264-PL 30..759 198..937 3797 98.5 Plus
CG32264-PK 822 CG32264-PK 94..822 199..937 3792 98.5 Plus
CG32264-PB 790 CG32264-PB 286..790 423..937 2600 96.5 Plus
CG32264-PJ 509 CG32264-PJ 13..509 431..937 2596 97.8 Plus
CG32264-PG 464 CG32264-PG 1..464 464..937 2415 97.7 Plus
Pdp1-PJ 633 CG17888-PJ 125..330 5..175 205 33.3 Plus
Pdp1-PD 647 CG17888-PD 125..330 5..175 205 33.3 Plus
Smr-PF 3601 CG4013-PF 137..566 5..475 201 24.5 Plus
Smr-PE 3601 CG4013-PE 137..566 5..475 201 24.5 Plus
Smr-PD 3601 CG4013-PD 137..566 5..475 201 24.5 Plus
Smr-PG 3607 CG4013-PG 153..572 1..475 201 24.4 Plus
nub-PB 961 CG34395-PB 31..207 16..165 189 34.6 Plus
ovo-PA 975 CG6824-PA 352..509 2..156 187 38 Plus
ovo-PD 1028 CG6824-PD 405..562 2..156 187 38 Plus
ovo-PC 1222 CG6824-PC 777..934 2..156 187 38 Plus
ovo-PE 1351 CG6824-PE 906..1063 2..156 187 38 Plus
ovo-PB 1351 CG6824-PB 906..1063 2..156 187 38 Plus
Rbfox1-PF 763 CG32062-PF 534..710 2..168 184 31.9 Plus
Rbfox1-PL 858 CG32062-PL 551..727 2..168 184 31.9 Plus
Rbfox1-PE 865 CG32062-PE 534..710 2..168 184 31.9 Plus
Rbfox1-PJ 889 CG32062-PJ 600..776 2..168 184 31.9 Plus
Rbfox1-PK 921 CG32062-PK 614..790 2..168 184 31.9 Plus
Rbfox1-PH 962 CG32062-PH 631..807 2..168 184 31.9 Plus
CG30389-PF 1009 CG30389-PF 842..1007 1..169 184 32.6 Plus
CG30389-PD 980 CG30389-PD 842..944 1..109 182 44 Plus
CG30389-PC 980 CG30389-PC 842..944 1..109 182 44 Plus
CG30389-PA 980 CG30389-PA 842..944 1..109 182 44 Plus
CG30389-PE 1037 CG30389-PE 899..1001 1..109 182 44 Plus
sr-PE 906 CG7847-PE 306..460 5..143 181 34.8 Plus
sr-PB 906 CG7847-PB 306..460 5..143 181 34.8 Plus
sr-PA 1186 CG7847-PA 586..740 5..143 181 34.8 Plus
sr-PD 1271 CG7847-PD 586..740 5..143 181 34.8 Plus
Smr-PF 3601 CG4013-PF 55..169 2..115 180 39.1 Plus
Smr-PE 3601 CG4013-PE 55..169 2..115 180 39.1 Plus
Smr-PD 3601 CG4013-PD 55..169 2..115 180 39.1 Plus
SoxN-PB 761 CG18024-PB 502..694 11..169 177 32.5 Plus
CG16711-PC 1497 CG16711-PC 1367..1483 5..150 176 39.7 Plus
Smr-PG 3607 CG4013-PG 55..167 2..113 175 38.9 Plus
cpo-PY 606 CG43738-PY 185..399 5..162 173 33 Plus
cpo-PX 606 CG43738-PX 185..399 5..162 173 33 Plus
cpo-PW 606 CG43738-PW 185..399 5..162 173 33 Plus
cpo-PU 606 CG43738-PU 185..399 5..162 173 33 Plus
cpo-PN 606 CG43738-PN 185..399 5..162 173 33 Plus
cpo-PV 607 CG43738-PV 185..399 5..162 173 33 Plus
cpo-PT 607 CG43738-PT 185..399 5..162 173 33 Plus
cpo-PO 748 CG43738-PO 185..399 5..162 173 33 Plus
cpo-PR 749 CG43738-PR 185..399 5..162 173 33 Plus
cpo-PQ 762 CG43738-PQ 185..399 5..162 173 33 Plus
cpo-PP 841 CG43738-PP 185..399 5..162 173 33 Plus
cpo-PS 962 CG43738-PS 185..399 5..162 173 33 Plus
CG10713-PA 475 CG10713-PA 145..300 16..158 172 33.3 Plus
ovo-PA 975 CG6824-PA 302..486 3..171 169 31.1 Plus
ovo-PD 1028 CG6824-PD 355..539 3..171 169 31.1 Plus
ovo-PC 1222 CG6824-PC 727..911 3..171 169 31.1 Plus
ovo-PE 1351 CG6824-PE 856..1040 3..171 169 31.1 Plus
ovo-PB 1351 CG6824-PB 856..1040 3..171 169 31.1 Plus
cpo-PP 841 CG43738-PP 771..829 5..66 161 53.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:08:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12812-PA 780 GI12812-PA 247..780 431..937 2068 87 Plus
Dmoj\GI12810-PA 304 GI12810-PA 1..264 199..430 660 75.7 Plus
Dmoj\GI12808-PA 319 GI12808-PA 144..315 63..204 293 48.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:08:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20999-PA 405 GL20999-PA 272..359 199..286 384 97.7 Plus
Dper\GL20998-PA 262 GL20998-PA 58..252 63..219 274 48.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:08:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10602-PA 917 GA10602-PA 271..684 199..577 1236 82.7 Plus
Dpse\GA10602-PA 917 GA10602-PA 703..917 724..937 1000 96.3 Plus
Dpse\GA10601-PA 639 GA10601-PA 437..620 63..200 281 50.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:08:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14043-PA 812 GM14043-PA 307..812 431..937 2747 99.6 Plus
Dsec\GM14041-PA 512 GM14041-PA 269..500 199..430 949 100 Plus
Dsec\GM14040-PA 225 GM14040-PA 56..219 54..216 396 84.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:08:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13322-PA 795 GD13322-PA 282..795 423..937 2750 98.4 Plus
Dsim\GD13320-PA 574 GD13320-PA 271..516 199..444 974 95.5 Plus
Dsim\GD13319-PA 227 GD13319-PA 57..217 54..212 460 87 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:08:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12956-PA 771 GJ12956-PA 255..771 431..937 2120 90.4 Plus
Dvir\GJ12954-PA 524 GJ12954-PA 280..524 199..431 851 79.6 Plus
Dvir\GJ12953-PA 233 GJ12953-PA 59..211 63..200 244 49.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:08:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20368-PA 831 GK20368-PA 316..831 423..933 2109 88.8 Plus
Dwil\GK20367-PA 564 GK20367-PA 303..555 199..434 829 81.9 Plus
Dwil\GK20366-PA 193 GK20366-PA 4..180 58..198 319 53.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:08:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20678-PA 810 GE20678-PA 297..810 423..937 2748 98.1 Plus
Dyak\GE20677-PA 532 GE20677-PA 281..517 199..433 945 96.2 Plus
Dyak\GE20676-PA 348 GE20676-PA 191..331 61..200 412 84.8 Plus

RE59328.hyp Sequence

Translation from 808 to 3621

> RE59328.hyp
MAAVQQQQHHQRQLLHHQHSHPPFQATQQHQPAQQQQQQQHQTVQQQQQQ
QQQRLHHSHHPPLQHHLSLGGYQQLQLQMQANRNQYSTPQHHYRNATNAA
AAAAATSANAATIRRRTLSHVSRSYSLGTAAANAAAAAAAAAATAAATTA
AATTATSSASSNNQLSIHKTGIMVAASRCRSPIMLCHSHSDGEFPLYRAK
KQNGAAIRTNSLGSGTRTPPLERKSKLSALGRFFKPWKWRRKKKSEKFEA
ASKSLERKISVRANRDELVQKGILMPESPLGNIPEPGEESYYNNSNSGAT
ANGSLLNSAVHNNSMSQANNSINATTGNPLISAAQQQLNQGLPNSISVQQ
FNGQNQNPQNSMANGLVGGGGGGGDGSSDTSSLSGGVPHSQSAPQQLGVG
QPPPPLTPLAQHHQALAQQLQQRFAISNNNEPRKDKTDAQQQQHGGNGTI
STPNIEQPTCQGSMLPPPGGGGHHQVDGSGKMERPNTLAGANKLTRRGVN
ICYHNEHMYGEDGKMVGGPPGSTPPPYPGGKLPPGVMLSELPEPPIPLSE
IGPIPPPPMFSTPSPTLIAGRPHGPGAVNDQDYQQDYDYDDNDPDQDELD
SDDEYAPYGGNHVRMMDTQRVEEIPAKEPKPNAVPLKSALKKKGGMQPAS
ASTPVTPTQEHGAGSAATAAAMANSNGGIGSMAAAAAAAAQQSANQRPLV
VRQDAAGNNYSLKPILRPRIRLCRQQMFNIQLPCTVENKENARPFVIRES
SSDSDDSDGHIVYRDEDNDNTRLAKLARKESLSLKLQLRPDKQDLINRNI
LHQVNDNELKESKEAIGARLIRRLSMRPTAEELVERNILKTQSPAEEKKQ
KEEKKSYLLRKLSFRPTVEELKEKKIIRFNDYIEVTQAHDYDRRADKPWT
RLTPKDKAAIRKELNEFKSSEMAVHEGSRHLTRFHRP*

RE59328.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:24:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG32264-PI 937 CG32264-PI 1..937 1..937 4894 100 Plus
CG32264-PM 927 CG32264-PM 1..927 1..937 4814 98.8 Plus
CG32264-PD 1008 CG32264-PD 133..1008 47..937 3892 84.4 Plus
CG32264-PE 998 CG32264-PE 133..998 47..937 3812 83.2 Plus
CG32264-PL 759 CG32264-PL 30..759 198..937 3797 98.5 Plus