BDGP Sequence Production Resources |
Search the DGRC for RE59371
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 593 |
Well: | 71 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG12920-RA |
Protein status: | RE59371.pep: gold |
Preliminary Size: | 1119 |
Sequenced Size: | 1320 |
Gene | Date | Evidence |
---|---|---|
CG12920 | 2002-01-01 | Sim4 clustering to Release 2 |
CG12920 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12920 | 2003-02-24 | Blastp of sequenced clone |
CG12920 | 2008-04-29 | Release 5.5 accounting |
CG12920 | 2008-08-15 | Release 5.9 accounting |
CG12920 | 2008-12-18 | 5.12 accounting |
1320 bp (1320 high quality bases) assembled on 2003-02-24
GenBank Submission: BT004856
> RE59371.complete ATCATTCGGTTCTGCAGTGACCAACCAAAGCCACAGGGATACCAGCTTTT GCTCTTTACACCGCTACAACGCTAAACAATCATGCACAAGAACACCATTT GGTACGGAGCTGTGCTCCTTGTCGTCTACTTCACGCTGGTGTTTTGCGAG GAGACGAAGAACGAGGAGGCTCCGGCGCAATTGGATAACCAAGTGGAGGA CACATGGGAAAATCTCGGCCGGGAGCTAATGGAGTTTGAGGGACGTACTC GACGCCATCGTCACCACATGTTCTGGTATCGTCACCTATGGCCCATTGCC ATTGCTTACTGGATCAAGGTGAAAGTGGTGATCGTATCCTTCTTTGTGGG CAGTGCCATCTACTTGGGTCTGCGCTATTTCTGGCCCCATGCCAGGTGCA ACCAGGAGATCATCCTTGATCATCCTCCTTCGTCTTTCTCTCATCACGAT CACATTCCCTACTCTCTGGACCACGATCACTCGGAGCACTATGATGCTCC TTCATCTTTTGACTCCGGCGCCAGTTTCGAGCCCTATTCCGGATACAGCA GCTATGCTGGATCGGACATTGTCTCTGATGTGCATGGCGACTACCATAGC GAATCTCCCTCTGGACCAAGTGGCCCATCTGGTCCCGTAGACACGCGCCG TCGCGGACGCCGTAGCGCTGCAGATAACGCCCATTTGATCCAAGATGAGC AGGAGGAAGAGCATGTGGAGATTGTGGATGAGGAAATTTCAGAGAGCGTG GCTCGCCAAATGCCCGCCGAAGAGCAGATTGCCGATTTTATGTTCGCCTT TTTGGGCCTGGACTCAAAGGCGTGCCGACGCCGATTTGTCTGCGAAATGG AGTTTAGATCCAAGTTGAATCCCTTGACCAGCATGGCTTTCCGCATTGTG GGTCGCGGTTTCTTTGAGAAGTACACCAATGCCAGAAATCCTATGGCCAG GGCCACCAGCTTTGGCGAGTGTGCTGCCGTCAATCCCGAGTGCATTTTCG TGGAGAACGACAACGGCGAGGAAAATCCGGAGTCGGAGGCACACCAGGAG GCTGATCAGCAACAGGAGGAGCAGGCAGTCACCGAGGAATCTGCCGCTGA GGATTCCCAGAATGAGATCAACCTCCAAGCCGAAAGGCGACGAGCCAAGC ACAAGAATCGCAAGCTCAGCTCCATTGCCGAGCACATCCTGATGCAGTAG AACAGCCTTGTCTAATTAATCTATTTAATTGTATTTATTTATTTTAGCTA TAAGAGTGGATAACGAACACAAATAAACTTGCCTCAATCTATGTATGGAA AGCGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 5958086..5958611 | 777..1302 | 2630 | 100 | Plus |
chr2R | 21145070 | chr2R | 5957675..5958026 | 426..777 | 1760 | 100 | Plus |
chr2R | 21145070 | chr2R | 5956655..5956931 | 1..277 | 1355 | 99.3 | Plus |
chr2R | 21145070 | chr2R | 5957466..5957613 | 278..425 | 740 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 10070540..10071072 | 777..1309 | 2650 | 99.8 | Plus |
2R | 25286936 | 2R | 10070129..10070480 | 426..777 | 1760 | 100 | Plus |
2R | 25286936 | 2R | 10069109..10069385 | 1..277 | 1385 | 100 | Plus |
2R | 25286936 | 2R | 10069920..10070067 | 278..425 | 740 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 10071739..10072271 | 777..1309 | 2650 | 99.8 | Plus |
2R | 25260384 | 2R | 10071328..10071679 | 426..777 | 1760 | 100 | Plus |
2R | 25260384 | 2R | 10070308..10070584 | 1..277 | 1385 | 100 | Plus |
2R | 25260384 | 2R | 10071119..10071266 | 278..425 | 740 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 5956655..5956931 | 1..277 | 99 | -> | Plus |
chr2R | 5957466..5957613 | 278..425 | 100 | -> | Plus |
chr2R | 5957675..5958025 | 426..776 | 100 | -> | Plus |
chr2R | 5958086..5958613 | 777..1304 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12920-RA | 1..1119 | 82..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12920-RA | 1..1119 | 82..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12920-RA | 1..1119 | 82..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12920-RA | 1..1119 | 82..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12920-RA | 1..1119 | 82..1200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12920-RA | 1..1304 | 1..1304 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12920-RA | 1..1304 | 1..1304 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12920-RA | 4..1307 | 1..1304 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12920-RA | 1..1304 | 1..1304 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12920-RA | 4..1307 | 1..1304 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10069109..10069385 | 1..277 | 100 | -> | Plus |
2R | 10069920..10070067 | 278..425 | 100 | -> | Plus |
2R | 10070129..10070479 | 426..776 | 100 | -> | Plus |
2R | 10070540..10071067 | 777..1304 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10069109..10069385 | 1..277 | 100 | -> | Plus |
2R | 10069920..10070067 | 278..425 | 100 | -> | Plus |
2R | 10070129..10070479 | 426..776 | 100 | -> | Plus |
2R | 10070540..10071067 | 777..1304 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10069109..10069385 | 1..277 | 100 | -> | Plus |
2R | 10069920..10070067 | 278..425 | 100 | -> | Plus |
2R | 10070129..10070479 | 426..776 | 100 | -> | Plus |
2R | 10070540..10071067 | 777..1304 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 5956614..5956890 | 1..277 | 100 | -> | Plus |
arm_2R | 5957425..5957572 | 278..425 | 100 | -> | Plus |
arm_2R | 5957634..5957984 | 426..776 | 100 | -> | Plus |
arm_2R | 5958045..5958572 | 777..1304 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 10070308..10070584 | 1..277 | 100 | -> | Plus |
2R | 10071119..10071266 | 278..425 | 100 | -> | Plus |
2R | 10071328..10071678 | 426..776 | 100 | -> | Plus |
2R | 10071739..10072266 | 777..1304 | 99 | Plus |
Translation from 81 to 1199
> RE59371.pep MHKNTIWYGAVLLVVYFTLVFCEETKNEEAPAQLDNQVEDTWENLGRELM EFEGRTRRHRHHMFWYRHLWPIAIAYWIKVKVVIVSFFVGSAIYLGLRYF WPHARCNQEIILDHPPSSFSHHDHIPYSLDHDHSEHYDAPSSFDSGASFE PYSGYSSYAGSDIVSDVHGDYHSESPSGPSGPSGPVDTRRRGRRSAADNA HLIQDEQEEEHVEIVDEEISESVARQMPAEEQIADFMFAFLGLDSKACRR RFVCEMEFRSKLNPLTSMAFRIVGRGFFEKYTNARNPMARATSFGECAAV NPECIFVENDNGEENPESEAHQEADQQQEEQAVTEESAAEDSQNEINLQA ERRRAKHKNRKLSSIAEHILMQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12015-PA | 373 | GF12015-PA | 1..373 | 1..372 | 1571 | 80.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24135-PA | 375 | GG24135-PA | 1..375 | 1..372 | 1629 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21918-PA | 388 | GH21918-PA | 1..388 | 1..372 | 980 | 64.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12920-PA | 372 | CG12920-PA | 1..372 | 1..372 | 1990 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19268-PA | 382 | GI19268-PA | 1..382 | 1..372 | 1154 | 66.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11517-PA | 365 | GL11517-PA | 1..365 | 1..372 | 1333 | 75.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11909-PA | 365 | GA11909-PA | 1..365 | 1..372 | 1335 | 76.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21180-PA | 378 | GM21180-PA | 1..378 | 1..372 | 1965 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10712-PA | 378 | GD10712-PA | 1..378 | 1..372 | 1971 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22144-PA | 378 | GJ22144-PA | 1..378 | 1..372 | 1218 | 68.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20643-PA | 356 | GK20643-PA | 1..356 | 1..372 | 1179 | 64.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19334-PA | 379 | GE19334-PA | 1..378 | 1..371 | 1684 | 92.1 | Plus |
Translation from 81 to 1199
> RE59371.hyp MHKNTIWYGAVLLVVYFTLVFCEETKNEEAPAQLDNQVEDTWENLGRELM EFEGRTRRHRHHMFWYRHLWPIAIAYWIKVKVVIVSFFVGSAIYLGLRYF WPHARCNQEIILDHPPSSFSHHDHIPYSLDHDHSEHYDAPSSFDSGASFE PYSGYSSYAGSDIVSDVHGDYHSESPSGPSGPSGPVDTRRRGRRSAADNA HLIQDEQEEEHVEIVDEEISESVARQMPAEEQIADFMFAFLGLDSKACRR RFVCEMEFRSKLNPLTSMAFRIVGRGFFEKYTNARNPMARATSFGECAAV NPECIFVENDNGEENPESEAHQEADQQQEEQAVTEESAAEDSQNEINLQA ERRRAKHKNRKLSSIAEHILMQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12920-PA | 372 | CG12920-PA | 1..372 | 1..372 | 1990 | 100 | Plus |