Clone RE59509 Report

Search the DGRC for RE59509

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:595
Well:9
Vector:pFlc-1
Associated Gene/Transcriptpan-RA
Protein status:RE59509.pep: gold
Sequenced Size:2679

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17964 2006-04-07 manual selection replacement
pan 2008-12-18 5.12 accounting

Clone Sequence Records

RE59509.complete Sequence

2679 bp assembled on 2008-09-19

GenBank Submission: BT044547.1

> RE59509.complete
ACTAATTTAAAAAAAATTCGATCAACGCAGACGTGTATAAATTAATTATG
CGCCTGATTTAAAGTACAAAATGTGTAAATATATCACCTTACCGTCGCGG
GTGCACCCAATTGTGCTTTGATGAATAAATATACATATATGCAACATATA
TAACTTCCTGTATATGCCCTTATAGAGTAAATACGACCTAACCGTCAAAA
TCATGCCTCATACACACAGCAGGCATGGATCATCAGGAGATGATTTATGC
AGTACTGATGAAGTGAAGATTTTTAAAGACGAAGGAGATCGCGAGGATGA
AAAAATATCATCTGAGAACTTATTAGTTGAAGAAAAGTCTAGCTTAATAG
ATTTAACTGAAAGTGAGGAAAAGGGTCACAAAATTTCAAGGCCGGACCAC
AGCCCTGTTTTTAATAAGCTGGACACCCACGCCCCTAGCTTTAACATGGG
TTACTTAGTTTCTCCTTATTCGTATGCCAATGGTTCTCCAAGTGGCTTAC
CGGTAACTATGGCCAACAAAATTGGACTGCCTCCGTTTTTTTGTCACAAT
GCTGATCCGTTATCAACACCACCACCAGCGCATTGCGGAATACCTCCATA
TCAACTGGATCCTAAGATGGGCTTAACTCGACCAGCGCTATACCCATTTG
CGGGAGGTCAATATCCTTACCCAATGCTAAGTTCAGATATGTCTCAAGTG
GCATCATGGCACACTCCTTCTGTTTATTCTGCATCTAGTTTTAGAACTCC
TTATCCCTCCTCACTACCAATAAATACTACACTTGCAAGTGATTTTCCAT
TCCGTTTTTCACCTAGCCTTTTACCTTCAGTACATGCCACATCGCACCAC
GTTATAAATGCTCATTCTGCTATTGTGGGGGTTAGCTCTAAACAAGAATG
CGGTGTTCAGGACCCAACAACGAATAATAGATATCCAAGGAACCTGGAAG
CAAAGCACACATCAAATGCGCAATCAAATGAATCCAAGGAGACAACAAAT
GATAAAAAAAAACCCCATATTAAGAAGCCACTAAATGCGTTCATGCTCTA
TATGAAGGAAATGCGTGCTAAGGTTGTTGCTGAATGCACTCTGAAGGAAT
CGGCTGCGATTAATCAGATTTTAGGAAGACGGTGGCACGAACTTTCCCGC
GAAGAACAAAGCAAATATTACGAAAAAGCTCGACAAGAGCGCCAATTGCA
TATGGAATTGTATCCGGGGTGGAGCGCACGAGATAACTATGGTTACGTGT
CAAAAAAGAAAAAGCGAAAAAAAGACAGATCGACAACGGATTCGGGAGGC
AATAATATGAAAAAATGCCGCGCCCGTTTCGGACTAGATCAACAGAGTCA
GTGGTGCAAACCGTGCAGGCGCAAAAAGAAATGTATTCGTTATATGGAAG
CCCTGAACGGCAATGGGCCCGCCGAAGACGGCAGCTGTTTTGATGAGCAC
GGAAGTCAGCTAAGTGATGACGACGAAGATGACTACGATGATGATAAACT
AGGCGGAAGTTGTGGAAGTGCCGACGAAACCAATAAAATAGAAGATGAGG
ACTCGGAATCCCTTAATCAATCTATGCCAAGCCCAGGCTGTCTTAGTGGA
TTGTCCAGTTTACAGAGCCCATCGACAACAATGAGCTTGGCAAGCCCACT
TAACATGAATGCCAATTCAGCAACCAATGTTATATTTCCTGCTTCTTCTA
ATGCACTTTTAATTGTCGGCGCAGACCAGCCGACAGCACAGCAACGACCC
ACATTGGTGTCAACCTCGGGATCGAGCAGCGGTTCAACCAGTAGCATAAG
TACAACCCCAAATACGTCGAGTACAGTTTCGCCAGTTACATGTATGACCG
GTCCGTGTCTCGGTTCATCTCAGGAACGAGCCATGATGCTTGGAAATCGG
TTCAGTCACTTGGGAATGGGGCTAAGTCCACCAGTAGTTAGCACGAGCAC
CAGTAAATCTGAACCATTTTTTAAGCCTCATCCCACAGTTTGCAATAATC
CTATATTTGCATTGCCATCAATTGGTAATTGTAGTTTAAATATTTCTTCA
ATGCCAAACACATCCCGAAACCCTATTGGTGCTAACCCACGAGATATTAA
TAATCCCCTTAGCATCAATCAGCTGACTAAAAGACGTGAATATAAAAATG
TTGAGTTAATTGAAGCTAGTGAGTCAAAGACTATAGTTGCCCATGCCGCT
ACATCCATTATTCAACATGTAGCAGTGAACGGCTATCATGCTAATCACTC
GCTTTTAAATAGCAACTTGGGCCACCTTCATCACCAATTAAATAATCGTA
CAGAAAACCCGAATAGAAGTGAGCAGACAATGCTGTCCGTAAGTAATCAT
TCTGTAAATAGCAGTGAATGCCATAAAGAATCTGATTCGCAGGCTATTGT
ATCTAGCAATCCTCCAAACGCTGGATCTTCCGATAACGGCGTTATTAGCG
TTTCATAACTGATCGCCATGGATTTGTAGAATTGATTAATCAAATTTTAA
TGTTAATGTGTGAGAAAATAATTAAAATAAAAACATAAGTGCAATAATTA
TTATTCTCGCCAGCCCAAAGCCATCTTATGAAACAAAAGGCCATCAAAAC
TAGTGCCACGACTCACATCGCAATATTTCGTTTAATAAAGAAAACATAGA
ATTGGTGCACAAGAAAAAAAAAAAAAAAA

RE59509.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:08:54
Subject Length Description Subject Range Query Range Score Percent Strand
pan.be 3252 pan.be 283..2768 177..2662 12400 99.9 Plus
pan-RE 2914 pan-RE 283..2768 177..2662 12400 99.9 Plus
pan.an 3858 pan.an 283..2768 177..2662 12400 99.9 Plus
pan.be 3252 pan.be 39..217 1..179 895 100 Plus
pan-RE 2914 pan-RE 39..217 1..179 895 100 Plus
pan.an 3858 pan.an 39..217 1..179 895 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:49:09
Subject Length Description Subject Range Query Range Score Percent Strand
chr4 1351717 chr4 128036..129331 1367..2662 6465 99.9 Plus
chr4 1351717 chr4 115055..115249 938..1132 975 100 Plus
chr4 1351717 chr4 93041..93232 177..368 960 100 Plus
chr4 1351717 chr4 115470..115637 1132..1299 840 100 Plus
chr4 1351717 chr4 107649..107801 788..940 765 100 Plus
chr4 1351717 chr4 90107..90233 35..161 635 100 Plus
chr4 1351717 chr4 103272..103382 511..621 540 99.1 Plus
chr4 1351717 chr4 95704..95802 414..512 495 100 Plus
chr4 1351717 chr4 106345..106434 620..709 450 100 Plus
chr4 1351717 chr4 106486..106567 708..789 410 100 Plus
chr4 1351717 chr4 120040..120112 1297..1369 365 100 Plus
chr4 1351717 chr4 93452..93504 366..418 250 98.1 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:06:43 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:49:07
Subject Length Description Subject Range Query Range Score Percent Strand
4 1348131 4 107401..108696 1367..2662 6465 99.9 Plus
4 1348131 4 94421..94615 938..1132 975 100 Plus
4 1348131 4 72404..72595 177..368 960 100 Plus
4 1348131 4 94836..95003 1132..1299 840 100 Plus
4 1348131 4 87015..87167 788..940 765 100 Plus
4 1348131 4 69473..69599 35..161 635 100 Plus
4 1348131 4 82637..82747 511..621 540 99.1 Plus
4 1348131 4 75068..75166 414..512 495 100 Plus
4 1348131 4 85711..85800 620..709 450 100 Plus
4 1348131 4 85852..85933 708..789 410 100 Plus
4 1348131 4 99404..99476 1297..1369 365 100 Plus
4 1348131 4 72815..72867 366..418 250 98.1 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:26:59
Subject Length Description Subject Range Query Range Score Percent Strand
4 1331231 4 107401..108696 1367..2662 6465 99.9 Plus
4 1331231 4 94421..94615 938..1132 975 100 Plus
4 1331231 4 72404..72595 177..368 960 100 Plus
4 1331231 4 94836..95003 1132..1299 840 100 Plus
4 1331231 4 87015..87167 788..940 765 100 Plus
4 1331231 4 69473..69599 35..161 635 100 Plus
4 1331231 4 82637..82747 511..621 540 99 Plus
4 1331231 4 75068..75166 414..512 495 100 Plus
4 1331231 4 85711..85800 620..709 450 100 Plus
4 1331231 4 85852..85933 708..789 410 100 Plus
4 1331231 4 99404..99476 1297..1369 365 100 Plus
4 1331231 4 72815..72867 366..418 250 98.1 Plus
4 1331231 4 69360..69394 1..35 175 100 Plus
Blast to na_te.dros performed 2019-03-16 09:49:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 6355..6511 32..188 126 59.3 Plus
TART-A 13424 TART-A 13424bp 4249..4333 949..1036 117 62.5 Plus

RE59509.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:50:16 Download gff for RE59509.complete
Subject Subject Range Query Range Percent Splice Strand
chr4 89994..90028 1..35 100 -> Plus
chr4 90108..90233 36..161 100 -> Plus
chr4 92958..92972 162..176 100 -> Plus
chr4 93041..93231 177..367 100 -> Plus
chr4 93454..93499 368..413 100 -> Plus
chr4 95704..95801 414..511 100 -> Plus
chr4 103273..103381 512..620 99 -> Plus
chr4 106346..106433 621..708 100 -> Plus
chr4 106487..106567 709..789 100 -> Plus
chr4 107651..107800 790..939 100 -> Plus
chr4 115057..115249 940..1132 100 -> Plus
chr4 115471..115636 1133..1298 100 -> Plus
chr4 120042..120111 1299..1368 100 -> Plus
chr4 128038..129331 1369..2663 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:41:53 Download gff for RE59509.complete
Subject Subject Range Query Range Percent Splice Strand
pan-RB 1..2256 203..2458 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:13:00 Download gff for RE59509.complete
Subject Subject Range Query Range Percent Splice Strand
pan-RB 1..2256 203..2458 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:38:32 Download gff for RE59509.complete
Subject Subject Range Query Range Percent Splice Strand
pan-RB 1..2256 203..2458 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:46:08 Download gff for RE59509.complete
Subject Subject Range Query Range Percent Splice Strand
pan-RB 1..2256 203..2458 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:41:53 Download gff for RE59509.complete
Subject Subject Range Query Range Percent Splice Strand
pan-RG 31..2692 1..2663 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:13:00 Download gff for RE59509.complete
Subject Subject Range Query Range Percent Splice Strand
pan-RG 31..2692 1..2663 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:38:32 Download gff for RE59509.complete
Subject Subject Range Query Range Percent Splice Strand
pan-RB 35..69 1..35 100 -> Plus
pan-RB 149..270 36..157 100 <- Plus
pan-RB 523..3023 158..2660 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-19 18:50:32 Download gff for RE59509.complete
Subject Subject Range Query Range Percent Splice Strand
pan-RG 31..2692 1..2663 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:46:08 Download gff for RE59509.complete
Subject Subject Range Query Range Percent Splice Strand
pan-RB 149..270 36..157 100 <- Plus
pan-RB 35..69 1..35 100 -> Plus
pan-RB 523..3023 158..2660 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:50:16 Download gff for RE59509.complete
Subject Subject Range Query Range Percent Splice Strand
4 69360..69394 1..35 100 -> Plus
4 69474..69599 36..161 100 -> Plus
4 72321..72335 162..176 100 -> Plus
4 72404..72594 177..367 100 -> Plus
4 72817..72862 368..413 100 -> Plus
4 75068..75165 414..511 100 -> Plus
4 82638..82746 512..620 99 -> Plus
4 85712..85799 621..708 100 -> Plus
4 85853..85933 709..789 100 -> Plus
4 87017..87166 790..939 100 -> Plus
4 94423..94615 940..1132 100 -> Plus
4 94837..95002 1133..1298 100 -> Plus
4 99406..99475 1299..1368 100 -> Plus
4 107403..108696 1369..2663 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:50:16 Download gff for RE59509.complete
Subject Subject Range Query Range Percent Splice Strand
4 69360..69394 1..35 100 -> Plus
4 69474..69599 36..161 100 -> Plus
4 72321..72335 162..176 100 -> Plus
4 72404..72594 177..367 100 -> Plus
4 72817..72862 368..413 100 -> Plus
4 75068..75165 414..511 100 -> Plus
4 82638..82746 512..620 99 -> Plus
4 85712..85799 621..708 100 -> Plus
4 85853..85933 709..789 100 -> Plus
4 87017..87166 790..939 100 -> Plus
4 94423..94615 940..1132 100 -> Plus
4 94837..95002 1133..1298 100 -> Plus
4 99406..99475 1299..1368 100 -> Plus
4 107403..108696 1369..2663 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:50:16 Download gff for RE59509.complete
Subject Subject Range Query Range Percent Splice Strand
4 69360..69394 1..35 100 -> Plus
4 69474..69599 36..161 100 -> Plus
4 72321..72335 162..176 100 -> Plus
4 72404..72594 177..367 100 -> Plus
4 72817..72862 368..413 100 -> Plus
4 75068..75165 414..511 100 -> Plus
4 82638..82746 512..620 99 -> Plus
4 85712..85799 621..708 100 -> Plus
4 85853..85933 709..789 100 -> Plus
4 87017..87166 790..939 100 -> Plus
4 94423..94615 940..1132 100 -> Plus
4 94837..95002 1133..1298 100 -> Plus
4 99406..99475 1299..1368 100 -> Plus
4 107403..108696 1369..2663 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:38:32 Download gff for RE59509.complete
Subject Subject Range Query Range Percent Splice Strand
arm_4 95694..95791 414..511 100 -> Plus
arm_4 103264..103372 512..620 99 -> Plus
arm_4 106338..106425 621..708 100 -> Plus
arm_4 106479..106559 709..789 100 -> Plus
arm_4 120032..120101 1299..1368 100 -> Plus
arm_4 107643..107792 790..939 100 -> Plus
arm_4 93030..93220 177..367 100 -> Plus
arm_4 89986..90020 1..35 100 -> Plus
arm_4 90100..90225 36..161 100 -> Plus
arm_4 92947..92961 162..176 100 -> Plus
arm_4 93443..93488 368..413 100 -> Plus
arm_4 115049..115241 940..1132 100 -> Plus
arm_4 115463..115628 1133..1298 100 -> Plus
arm_4 128029..129322 1369..2663 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:43:33 Download gff for RE59509.complete
Subject Subject Range Query Range Percent Splice Strand
4 107403..108696 1369..2663 99   Plus
4 69360..69394 1..35 100 -> Plus
4 69474..69599 36..161 100 -> Plus
4 72321..72335 162..176 100 -> Plus
4 72404..72594 177..367 100 -> Plus
4 72817..72862 368..413 100 -> Plus
4 75068..75165 414..511 100 -> Plus
4 82638..82746 512..620 99 -> Plus
4 85712..85799 621..708 100 -> Plus
4 85853..85933 709..789 100 -> Plus
4 87017..87166 790..939 100 -> Plus
4 94423..94615 940..1132 100 -> Plus
4 94837..95002 1133..1298 100 -> Plus
4 99406..99475 1299..1368 100 -> Plus

RE59509.pep Sequence

Translation from 202 to 2457

> RE59509.pep
MPHTHSRHGSSGDDLCSTDEVKIFKDEGDREDEKISSENLLVEEKSSLID
LTESEEKGHKISRPDHSPVFNKLDTHAPSFNMGYLVSPYSYANGSPSGLP
VTMANKIGLPPFFCHNADPLSTPPPAHCGIPPYQLDPKMGLTRPALYPFA
GGQYPYPMLSSDMSQVASWHTPSVYSASSFRTPYPSSLPINTTLASDFPF
RFSPSLLPSVHATSHHVINAHSAIVGVSSKQECGVQDPTTNNRYPRNLEA
KHTSNAQSNESKETTNDKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKES
AAINQILGRRWHELSREEQSKYYEKARQERQLHMELYPGWSARDNYGYVS
KKKKRKKDRSTTDSGGNNMKKCRARFGLDQQSQWCKPCRRKKKCIRYMEA
LNGNGPAEDGSCFDEHGSQLSDDDEDDYDDDKLGGSCGSADETNKIEDED
SESLNQSMPSPGCLSGLSSLQSPSTTMSLASPLNMNANSATNVIFPASSN
ALLIVGADQPTAQQRPTLVSTSGSSSGSTSSISTTPNTSSTVSPVTCMTG
PCLGSSQERAMMLGNRFSHLGMGLSPPVVSTSTSKSEPFFKPHPTVCNNP
IFALPSIGNCSLNISSMPNTSRNPIGANPRDINNPLSINQLTKRREYKNV
ELIEASESKTIVAHAATSIIQHVAVNGYHANHSLLNSNLGHLHHQLNNRT
ENPNRSEQTMLSVSNHSVNSSECHKESDSQAIVSSNPPNAGSSDNGVISV
S*

RE59509.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:53:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19332-PA 741 GF19332-PA 1..741 1..751 2725 73.8 Plus
Dana\GF20041-PA 275 GF20041-PA 76..149 270..343 170 40.5 Plus
Dana\GF12887-PA 561 GF12887-PA 34..130 255..356 161 35 Plus
Dana\GF12898-PA 784 GF12898-PA 199..306 245..365 156 28.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:53:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16376-PA 752 GG16376-PA 1..752 1..751 3498 92.7 Plus
Dere\GG16436-PA 616 GG16436-PA 420..493 270..343 176 40.5 Plus
Dere\GG22917-PA 668 GG22917-PA 173..269 255..356 163 35.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:53:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23986-PA 839 GH23986-PA 1..500 1..482 1829 77.4 Plus
Dgri\GH24007-PA 682 GH24007-PA 470..543 270..343 177 40.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:16:18
Subject Length Description Subject Range Query Range Score Percent Strand
pan-PR 751 CG34403-PR 1..751 1..751 3972 100 Plus
pan-PA 751 CG34403-PA 1..751 1..751 3972 100 Plus
pan-PB 751 CG34403-PB 1..751 1..751 3972 100 Plus
pan-PD 751 CG34403-PD 1..751 1..751 3972 100 Plus
pan-PS 733 CG34403-PS 1..733 1..751 3848 97.6 Plus
pan-PH 747 CG34403-PH 1..747 1..751 3839 97.1 Plus
pan-PJ 1192 CG34403-PJ 688..1192 247..751 2642 100 Plus
pan-PI 410 CG34403-PI 1..385 1..389 1964 94.3 Plus
pan-PQ 494 CG34403-PQ 1..384 1..388 1959 94.3 Plus
Sox102F-PD 580 CG11153-PD 382..455 270..343 170 40.5 Plus
Sox102F-PC 580 CG11153-PC 382..455 270..343 170 40.5 Plus
Sox102F-PA 580 CG11153-PA 382..455 270..343 170 40.5 Plus
Sox102F-PB 618 CG11153-PB 420..493 270..343 170 40.5 Plus
Sox14-PC 669 CG3090-PC 25..268 119..360 166 28.1 Plus
Sox14-PB 669 CG3090-PB 25..268 119..360 166 28.1 Plus
Sox14-PA 669 CG3090-PA 25..268 119..360 166 28.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:53:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14114-PA 877 GI14114-PA 1..750 1..664 2286 64.1 Plus
Dmoj\GI14086-PA 496 GI14086-PA 237..365 218..343 185 31 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:53:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18397-PA 756 GL18397-PA 1..756 1..751 2773 74.7 Plus
Dper\GL15612-PA 599 GL15612-PA 389..462 270..343 177 40.5 Plus
Dper\GL11646-PA 648 GL11646-PA 154..232 272..356 162 37.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:53:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14746-PA 756 GA14746-PA 1..756 1..751 2774 74.7 Plus
Dpse\GA10800-PA 684 GA10800-PA 474..547 270..343 179 40.5 Plus
Dpse\GA15918-PA 545 GA15918-PA 51..129 272..356 161 37.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:53:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23239-PA 701 GM23239-PA 1..701 1..751 3351 90.4 Plus
Dsec\GM26768-PA 617 GM26768-PA 419..492 270..343 177 40.5 Plus
Dsec\GM16076-PA 337 GM16076-PA 188..264 272..354 162 38.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:53:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\pan-PA 500 GD17850-PA 52..414 389..751 1601 95 Plus
Dsim\pan-PA 500 GD17850-PA 1..52 194..246 261 92.5 Plus
Dsim\Sox102F-PA 617 GD24371-PA 419..492 270..343 177 40.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:53:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21981-PA 769 GJ21981-PA 1..769 1..751 2419 68.1 Plus
Dvir\GJ16151-PA 669 GJ16151-PA 463..593 270..419 181 28.8 Plus
Dvir\GJ21897-PA 489 GJ21897-PA 41..119 272..356 155 36.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:53:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13619-PA 775 GK13619-PA 1..775 1..751 2552 69.7 Plus
Dwil\GK13587-PA 935 GK13587-PA 740..813 270..343 177 40.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:53:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14535-PA 745 GE14535-PA 1..745 1..751 3389 92 Plus
Dyak\GE14503-PA 618 GE14503-PA 420..493 270..343 176 40.5 Plus
Dyak\GE14354-PA 685 GE14354-PA 183..279 255..356 163 35.9 Plus

RE59509.hyp Sequence

Translation from 202 to 2457

> RE59509.hyp
MPHTHSRHGSSGDDLCSTDEVKIFKDEGDREDEKISSENLLVEEKSSLID
LTESEEKGHKISRPDHSPVFNKLDTHAPSFNMGYLVSPYSYANGSPSGLP
VTMANKIGLPPFFCHNADPLSTPPPAHCGIPPYQLDPKMGLTRPALYPFA
GGQYPYPMLSSDMSQVASWHTPSVYSASSFRTPYPSSLPINTTLASDFPF
RFSPSLLPSVHATSHHVINAHSAIVGVSSKQECGVQDPTTNNRYPRNLEA
KHTSNAQSNESKETTNDKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKES
AAINQILGRRWHELSREEQSKYYEKARQERQLHMELYPGWSARDNYGYVS
KKKKRKKDRSTTDSGGNNMKKCRARFGLDQQSQWCKPCRRKKKCIRYMEA
LNGNGPAEDGSCFDEHGSQLSDDDEDDYDDDKLGGSCGSADETNKIEDED
SESLNQSMPSPGCLSGLSSLQSPSTTMSLASPLNMNANSATNVIFPASSN
ALLIVGADQPTAQQRPTLVSTSGSSSGSTSSISTTPNTSSTVSPVTCMTG
PCLGSSQERAMMLGNRFSHLGMGLSPPVVSTSTSKSEPFFKPHPTVCNNP
IFALPSIGNCSLNISSMPNTSRNPIGANPRDINNPLSINQLTKRREYKNV
ELIEASESKTIVAHAATSIIQHVAVNGYHANHSLLNSNLGHLHHQLNNRT
ENPNRSEQTMLSVSNHSVNSSECHKESDSQAIVSSNPPNAGSSDNGVISV
S*

RE59509.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:37:20
Subject Length Description Subject Range Query Range Score Percent Strand
pan-PR 751 CG34403-PR 1..751 1..751 3972 100 Plus
pan-PA 751 CG34403-PA 1..751 1..751 3972 100 Plus
pan-PB 751 CG34403-PB 1..751 1..751 3972 100 Plus
pan-PD 751 CG34403-PD 1..751 1..751 3972 100 Plus
pan-PS 733 CG34403-PS 1..733 1..751 3848 97.6 Plus